RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 HAUS4Q9H6D7 363 aa13.87□□□□□ -0.19
CHMP3-201ENST00000263856 EHD2Q9NZN4 543 aa13.87□□□□□ -0.19
CHMP3-201ENST00000263856 H7C1D1 291 aa13.87□□□□□ -0.19
CHMP3-201ENST00000263856 MYBL2P10244 700 aa13.87□□□□□ -0.19
CHMP3-201ENST00000263856 TFAP4Q01664 338 aa13.87□□□□□ -0.19
CHMP3-201ENST00000263856 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.87□□□□□ -0.19
CHMP3-201ENST00000263856 C3orf67Q6ZVT6 689 aa13.87□□□□□ -0.19
CHMP3-201ENST00000263856 IRF2BP1Q8IU81 584 aa13.87□□□□□ -0.19
CHMP3-201ENST00000263856 NHEJ1Q9H9Q4 299 aaPredicted RBP13.87□□□□□ -0.19
CHMP3-201ENST00000263856 MKNK2Q9HBH9 465 aa13.87□□□□□ -0.19
CHMP3-201ENST00000263856 LRWD1Q9UFC0 647 aa13.87□□□□□ -0.19
CHMP3-201ENST00000263856 FCER1AP12319 257 aa13.87□□□□□ -0.19
CHMP3-201ENST00000263856 GGCXP38435 758 aa13.87□□□□□ -0.19
CHMP3-201ENST00000263856 MAP9Q49MG5 647 aa13.87□□□□□ -0.19
CHMP3-201ENST00000263856 MMRN2Q9H8L6 949 aa13.87□□□□□ -0.19
CHMP3-201ENST00000263856 EXOC1Q9NV70 894 aa13.87□□□□□ -0.19
CHMP3-201ENST00000263856 SLAIN2Q9P270 581 aa13.87□□□□□ -0.19
CHMP3-201ENST00000263856 USP17L3A6NCW0 530 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 USP17L4A6NCW7 530 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 LGALS16A8MUM7 142 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 NKRFO15226 690 aaKnown RBP eCLIP13.86□□□□□ -0.19
CHMP3-201ENST00000263856 IVLP07476 585 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 USP14P54578 494 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 AMPD2Q01433 879 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 TUBB2AQ13885 445 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 EZH2Q15910 746 aaKnown RBP13.86□□□□□ -0.19
CHMP3-201ENST00000263856 WDR59Q6PJI9 974 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 USP17L1Q7RTZ2 530 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 TNFRSF25Q93038 417 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 CNOT6LQ96LI5 555 aaKnown RBP13.86□□□□□ -0.19
CHMP3-201ENST00000263856 CCDC42Q96M95 316 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 TUBB2BQ9BVA1 445 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 TANGO6Q9C0B7 1094 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 TSPYL1Q9H0U9 437 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 KRT83P78385 493 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 MECOMQ03112 1051 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 KIF5AQ12840 1032 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 PPP2R5BQ15173 497 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 SPA17Q15506 151 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 ERFEQ4G0M1 354 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 SND1Q7KZF4 910 aaKnown RBP eCLIP13.86□□□□□ -0.19
CHMP3-201ENST00000263856 TRAPPC11Q7Z392 1133 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 CRNKL1Q9BZJ0 848 aaKnown RBP13.86□□□□□ -0.19
CHMP3-201ENST00000263856 MLXIPQ9HAP2 919 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 SLC39A2Q9NP94 309 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 CCDC87Q9NVE4 849 aa13.86□□□□□ -0.19
CHMP3-201ENST00000263856 ERVV-1B6SEH8 477 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 DDAH1O94760 285 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 RNASE9P60153 205 aaKnown RBP13.85□□□□□ -0.19
CHMP3-201ENST00000263856 PFKFB3Q16875 520 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-201ENST00000263856 CCDC181Q5TID7 509 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 DYMQ7RTS9 669 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 C2CD5Q86YS7 1000 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 ADSSL1Q8N142 457 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 SLC44A5Q8NCS7 719 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 PNMA1Q8ND90 353 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 MYO1AQ9UBC5 1043 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 SAP30BPQ9UHR5 308 aaKnown RBP13.85□□□□□ -0.19
CHMP3-201ENST00000263856 LRP6O75581 1613 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 ZNF142P52746 1687 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-201ENST00000263856 PDE2AO00408 941 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-201ENST00000263856 CCNT1O60563 726 aaKnown RBP13.85□□□□□ -0.19
CHMP3-201ENST00000263856 KIF5BP33176 963 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 LRRC31Q6UY01 552 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 DZIP1Q86YF9 867 aaKnown RBP13.85□□□□□ -0.19
CHMP3-201ENST00000263856 NUP98P52948 1817 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 FAM170AA1A519 330 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 MOCS3O95396 460 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 PLCG1P19174 1290 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 TECP42680 631 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 KCTD19Q17RG1 926 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-201ENST00000263856 CT47A1Q5JQC4 288 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-201ENST00000263856 CCDC70Q6NSX1 233 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 ZNF384Q8TF68 577 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 CELF1Q92879 486 aaKnown RBP13.85□□□□□ -0.19
CHMP3-201ENST00000263856 SECISBP2LQ93073 1101 aaKnown RBP13.85□□□□□ -0.19
CHMP3-201ENST00000263856 CCDC47Q96A33 483 aaKnown RBP13.85□□□□□ -0.19
CHMP3-201ENST00000263856 SELENOOQ9BVL4 669 aa13.85□□□□□ -0.19
CHMP3-201ENST00000263856 DCP1AQ9NPI6 582 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-201ENST00000263856 AKR1B10O60218 316 aa13.84□□□□□ -0.19
CHMP3-201ENST00000263856 LONP1P36776 959 aaKnown RBP13.84□□□□□ -0.19
CHMP3-201ENST00000263856 EHD4Q9H223 541 aa13.84□□□□□ -0.19
CHMP3-201ENST00000263856 PSD3Q9NYI0 1048 aa13.84□□□□□ -0.19
CHMP3-201ENST00000263856 HPCAL4Q9UM19 191 aa13.84□□□□□ -0.19
CHMP3-201ENST00000263856 MYH13Q9UKX3 1938 aa13.84□□□□□ -0.19
CHMP3-201ENST00000263856 NID2Q14112 1375 aa13.84□□□□□ -0.19
CHMP3-201ENST00000263856 MYH10P35580 1976 aa13.84□□□□□ -0.19
CHMP3-201ENST00000263856 NCK2O43639 380 aa13.84□□□□□ -0.19
CHMP3-201ENST00000263856 BUB1O43683 1085 aa13.84□□□□□ -0.19
CHMP3-201ENST00000263856 RCAN1P53805 252 aa13.84□□□□□ -0.19
CHMP3-201ENST00000263856 CKAP4Q07065 602 aaKnown RBP13.84□□□□□ -0.19
CHMP3-201ENST00000263856 ANKRD40Q6AI12 368 aa13.84□□□□□ -0.19
CHMP3-201ENST00000263856 CABP7Q86V35 215 aa13.84□□□□□ -0.19
CHMP3-201ENST00000263856 HDAC7Q8WUI4 952 aa13.84□□□□□ -0.19
CHMP3-201ENST00000263856 RRP36Q96EU6 259 aaKnown RBP13.84□□□□□ -0.19
CHMP3-201ENST00000263856 TCP11L1Q9NUJ3 509 aa13.84□□□□□ -0.19
CHMP3-201ENST00000263856 CALML3P27482 149 aa13.83□□□□□ -0.19
CHMP3-201ENST00000263856 DNM2P50570 870 aa13.83□□□□□ -0.19
CHMP3-201ENST00000263856 STK4Q13043 487 aa13.83□□□□□ -0.19
CHMP3-201ENST00000263856 PTPROQ16827 1216 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms