RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 NONOQ15233 471 aaKnown RBP eCLIP18■□□□□ 0.47
VPS26A-201ENST00000263559 JAKMIP3Q5VZ66 844 aa18■□□□□ 0.47
VPS26A-201ENST00000263559 NUP88Q99567 741 aaPredicted RBP18■□□□□ 0.47
VPS26A-201ENST00000263559 TUBE1Q9UJT0 475 aa18■□□□□ 0.47
VPS26A-201ENST00000263559 A0A087X0B3 334 aa18■□□□□ 0.47
VPS26A-201ENST00000263559 FZD9O00144 591 aa18■□□□□ 0.47
VPS26A-201ENST00000263559 TBC1D12O60347 775 aa18■□□□□ 0.47
VPS26A-201ENST00000263559 NDUFB10O96000 172 aa18■□□□□ 0.47
VPS26A-201ENST00000263559 ZRSR1Q15695 479 aaKnown RBP18■□□□□ 0.47
VPS26A-201ENST00000263559 ELOA2Q8IYF1 753 aaPredicted RBP18■□□□□ 0.47
VPS26A-201ENST00000263559 REXO1Q8N1G1 1221 aaKnown RBP18■□□□□ 0.47
VPS26A-201ENST00000263559 TMEM260Q9NX78 707 aa18■□□□□ 0.47
VPS26A-201ENST00000263559 GJA3Q9Y6H8 435 aa18■□□□□ 0.47
VPS26A-201ENST00000263559 GMPSP49915 693 aaPredicted RBP17.99■□□□□ 0.47
VPS26A-201ENST00000263559 ADCY7P51828 1080 aa17.99■□□□□ 0.47
VPS26A-201ENST00000263559 DPCR1Q3MIW9 517 aa17.99■□□□□ 0.47
VPS26A-201ENST00000263559 ARL6IP4Q66PJ3 421 aaKnown RBP17.99■□□□□ 0.47
VPS26A-201ENST00000263559 GMCL1Q96IK5 515 aa17.99■□□□□ 0.47
VPS26A-201ENST00000263559 ACTN4O43707 911 aaKnown RBP17.99■□□□□ 0.47
VPS26A-201ENST00000263559 ECE1P42892 770 aa17.99■□□□□ 0.47
VPS26A-201ENST00000263559 MMP14P50281 582 aa17.99■□□□□ 0.47
VPS26A-201ENST00000263559 NLRP12P59046 1061 aa17.99■□□□□ 0.47
VPS26A-201ENST00000263559 ISM2Q6H9L7 571 aa17.99■□□□□ 0.47
VPS26A-201ENST00000263559 PPP1R18Q6NYC8 613 aa17.98■□□□□ 0.47
VPS26A-201ENST00000263559 MICALL2Q8IY33 904 aa17.98■□□□□ 0.47
VPS26A-201ENST00000263559 CEP57L1Q8IYX8 460 aa17.98■□□□□ 0.47
VPS26A-201ENST00000263559 TMEM60Q9H2L4 133 aa17.98■□□□□ 0.47
VPS26A-201ENST00000263559 ZBTB21Q9ULJ3 1066 aa17.98■□□□□ 0.47
VPS26A-201ENST00000263559 RASA3Q14644 834 aa17.98■□□□□ 0.47
VPS26A-201ENST00000263559 QRICH1Q2TAL8 776 aa17.98■□□□□ 0.47
VPS26A-201ENST00000263559 SAMD7Q7Z3H4 446 aa17.98■□□□□ 0.47
VPS26A-201ENST00000263559 TBCKQ8TEA7 893 aa17.98■□□□□ 0.47
VPS26A-201ENST00000263559 DPF2Q92785 391 aa17.98■□□□□ 0.47
VPS26A-201ENST00000263559 PCDHA5Q9Y5H7 936 aa17.98■□□□□ 0.47
VPS26A-201ENST00000263559 TNNI2P48788 182 aa17.97■□□□□ 0.47
VPS26A-201ENST00000263559 LETM2Q2VYF4 491 aa17.97■□□□□ 0.47
VPS26A-201ENST00000263559 DHX40Q8IX18 779 aaKnown RBP17.97■□□□□ 0.47
VPS26A-201ENST00000263559 ACER1Q8TDN7 264 aa17.97■□□□□ 0.47
VPS26A-201ENST00000263559 DHX58Q96C10 678 aa17.97■□□□□ 0.47
VPS26A-201ENST00000263559 RIC8AQ9NPQ8 531 aa17.97■□□□□ 0.47
VPS26A-201ENST00000263559 CNOT7Q9UIV1 285 aaKnown RBP17.97■□□□□ 0.47
VPS26A-201ENST00000263559 CCNT1O60563 726 aaKnown RBP17.97■□□□□ 0.47
VPS26A-201ENST00000263559 BMP3P12645 472 aa17.97■□□□□ 0.47
VPS26A-201ENST00000263559 MAP3K10Q02779 954 aa17.97■□□□□ 0.47
VPS26A-201ENST00000263559 NEK8Q86SG6 692 aa17.97■□□□□ 0.47
VPS26A-201ENST00000263559 NAT10Q9H0A0 1025 aaKnown RBP17.97■□□□□ 0.47
VPS26A-201ENST00000263559 ARHGEF10LQ9HCE6 1279 aa17.97■□□□□ 0.47
VPS26A-201ENST00000263559 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.97■□□□□ 0.47
VPS26A-201ENST00000263559 HOOK1Q9UJC3 728 aaKnown RBP17.97■□□□□ 0.47
VPS26A-201ENST00000263559 TMEM232C9JQI7 657 aa17.96■□□□□ 0.47
VPS26A-201ENST00000263559 PRR29P0C7W0 189 aa17.96■□□□□ 0.47
VPS26A-201ENST00000263559 POSTNQ15063 836 aa17.96■□□□□ 0.47
VPS26A-201ENST00000263559 CDC37Q16543 378 aaPredicted RBP17.96■□□□□ 0.47
VPS26A-201ENST00000263559 GRAMD1CQ8IYS0 662 aa17.96■□□□□ 0.47
VPS26A-201ENST00000263559 SPICE1Q8N0Z3 855 aa17.96■□□□□ 0.47
VPS26A-201ENST00000263559 SYNPO2Q9UMS6 1093 aa17.96■□□□□ 0.47
VPS26A-201ENST00000263559 GOLGA6L19H0YKK7 550 aa17.96■□□□□ 0.47
VPS26A-201ENST00000263559 CAP2P40123 477 aa17.96■□□□□ 0.47
VPS26A-201ENST00000263559 TBC1D10BQ4KMP7 808 aaPredicted RBP17.96■□□□□ 0.47
VPS26A-201ENST00000263559 KANK3Q6NY19 840 aa17.96■□□□□ 0.47
VPS26A-201ENST00000263559 TMX2Q9Y320 296 aa17.96■□□□□ 0.47
VPS26A-201ENST00000263559 ASTN2O75129 1339 aaPredicted RBP17.96■□□□□ 0.47
VPS26A-201ENST00000263559 ZNF541Q9H0D2 1346 aa17.96■□□□□ 0.47
VPS26A-201ENST00000263559 BECN2A8MW95 431 aa17.95■□□□□ 0.46
VPS26A-201ENST00000263559 LONP1P36776 959 aaKnown RBP17.95■□□□□ 0.46
VPS26A-201ENST00000263559 KIAA1755Q5JYT7 1200 aa17.95■□□□□ 0.46
VPS26A-201ENST00000263559 DTHD1Q6ZMT9 781 aa17.95■□□□□ 0.46
VPS26A-201ENST00000263559 SNAP25P60880 206 aa17.95■□□□□ 0.46
VPS26A-201ENST00000263559 IKQ13123 557 aaPredicted RBP17.95■□□□□ 0.46
VPS26A-201ENST00000263559 UBE2SQ16763 222 aa17.95■□□□□ 0.46
VPS26A-201ENST00000263559 AOPEPQ8N6M6 819 aa17.95■□□□□ 0.46
VPS26A-201ENST00000263559 CUL5Q93034 780 aa17.95■□□□□ 0.46
VPS26A-201ENST00000263559 TEPSINQ96N21 525 aa17.95■□□□□ 0.46
VPS26A-201ENST00000263559 PCDHA1Q9Y5I3 950 aa17.95■□□□□ 0.46
VPS26A-201ENST00000263559 UTRNP46939 3433 aa17.95■□□□□ 0.46
VPS26A-201ENST00000263559 LAD1O00515 517 aa17.95■□□□□ 0.46
VPS26A-201ENST00000263559 SLFN14P0C7P3 912 aa17.95■□□□□ 0.46
VPS26A-201ENST00000263559 CLK2P49760 499 aaKnown RBP17.95■□□□□ 0.46
VPS26A-201ENST00000263559 HS1BP3Q53T59 392 aa17.95■□□□□ 0.46
VPS26A-201ENST00000263559 SYDE2Q5VT97 1194 aa17.95■□□□□ 0.46
VPS26A-201ENST00000263559 PSTPIP2Q9H939 334 aa17.95■□□□□ 0.46
VPS26A-201ENST00000263559 CDC25AP30304 524 aa17.94■□□□□ 0.46
VPS26A-201ENST00000263559 MRPL12P52815 198 aaKnown RBP17.94■□□□□ 0.46
VPS26A-201ENST00000263559 TNFAIP1Q13829 316 aa17.94■□□□□ 0.46
VPS26A-201ENST00000263559 BTNL9Q6UXG8 535 aa17.94■□□□□ 0.46
VPS26A-201ENST00000263559 BPIFA3Q9BQP9 254 aa17.94■□□□□ 0.46
VPS26A-201ENST00000263559 EDIL3O43854 480 aa17.94■□□□□ 0.46
VPS26A-201ENST00000263559 PRPHP41219 470 aa17.94■□□□□ 0.46
VPS26A-201ENST00000263559 HACL1Q9UJ83 578 aa17.94■□□□□ 0.46
VPS26A-201ENST00000263559 SARSP49591 514 aaKnown RBP17.93■□□□□ 0.46
VPS26A-201ENST00000263559 E2F4Q16254 413 aa17.93■□□□□ 0.46
VPS26A-201ENST00000263559 NT5DC1Q5TFE4 455 aa17.93■□□□□ 0.46
VPS26A-201ENST00000263559 SH3RF1Q7Z6J0 888 aa17.93■□□□□ 0.46
VPS26A-201ENST00000263559 SPON1Q9HCB6 807 aa17.93■□□□□ 0.46
VPS26A-201ENST00000263559 GOPCQ9HD26 462 aa17.93■□□□□ 0.46
VPS26A-201ENST00000263559 CCDC39Q9UFE4 941 aa17.93■□□□□ 0.46
VPS26A-201ENST00000263559 ATAD5Q96QE3 1844 aa17.93■□□□□ 0.46
VPS26A-201ENST00000263559 PHF20L1A8MW92 1017 aa17.93■□□□□ 0.46
VPS26A-201ENST00000263559 ESPNB1AK53 854 aa17.93■□□□□ 0.46
VPS26A-201ENST00000263559 NEMFO60524 1076 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms