RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 STOX1Q6ZVD7 989 aa21.6■■□□□ 1.05
COPE-201ENST00000262812 CHST13Q8NET6 341 aa21.6■■□□□ 1.05
COPE-201ENST00000262812 NCOA7Q8NI08 942 aa21.6■■□□□ 1.05
COPE-201ENST00000262812 TRERF1Q96PN7 1200 aa21.6■■□□□ 1.05
COPE-201ENST00000262812 UBA5Q9GZZ9 404 aa21.6■■□□□ 1.05
COPE-201ENST00000262812 PPP4R2Q9NY27 417 aa21.6■■□□□ 1.05
COPE-201ENST00000262812 FBXO40Q9UH90 709 aa21.6■■□□□ 1.05
COPE-201ENST00000262812 CDC45O75419 566 aa21.59■■□□□ 1.05
COPE-201ENST00000262812 SNHG28P0DPA3 235 aa21.59■■□□□ 1.05
COPE-201ENST00000262812 CPVLQ9H3G5 476 aa21.59■■□□□ 1.05
COPE-201ENST00000262812 RNF146Q9NTX7 359 aa21.59■■□□□ 1.05
COPE-201ENST00000262812 CCPG1Q9ULG6 757 aa21.59■■□□□ 1.05
COPE-201ENST00000262812 PARP14Q460N5 1801 aa21.58■■□□□ 1.05
COPE-201ENST00000262812 IFIT3O14879 490 aaKnown RBP21.58■■□□□ 1.05
COPE-201ENST00000262812 IGHA2P01877 340 aa21.58■■□□□ 1.05
COPE-201ENST00000262812 LHX8Q68G74 356 aa21.58■■□□□ 1.05
COPE-201ENST00000262812 PAWRQ96IZ0 340 aaKnown RBP21.58■■□□□ 1.05
COPE-201ENST00000262812 RANBP17Q9H2T7 1088 aaKnown RBP21.58■■□□□ 1.05
COPE-201ENST00000262812 ACAD9Q9H845 621 aa21.58■■□□□ 1.05
COPE-201ENST00000262812 DIS3Q9Y2L1 958 aaKnown RBP21.58■■□□□ 1.05
COPE-201ENST00000262812 MKI67P46013 3256 aaKnown RBP21.58■■□□□ 1.05
COPE-201ENST00000262812 SLC27A2O14975 620 aa21.57■■□□□ 1.04
COPE-201ENST00000262812 SEC23AQ15436 765 aa21.57■■□□□ 1.04
COPE-201ENST00000262812 TKFCQ3LXA3 575 aa21.57■■□□□ 1.04
COPE-201ENST00000262812 MUM1L1Q5H9M0 696 aa21.57■■□□□ 1.04
COPE-201ENST00000262812 GPATCH4Q5T3I0 446 aaKnown RBP21.57■■□□□ 1.04
COPE-201ENST00000262812 UBE2Q1Q7Z7E8 422 aa21.57■■□□□ 1.04
COPE-201ENST00000262812 DIS3LQ8TF46 1054 aaKnown RBP21.57■■□□□ 1.04
COPE-201ENST00000262812 DPF3Q92784 378 aa21.57■■□□□ 1.04
COPE-201ENST00000262812 TINF2Q9BSI4 451 aa21.57■■□□□ 1.04
COPE-201ENST00000262812 OGDHLQ9ULD0 1010 aa21.57■■□□□ 1.04
COPE-201ENST00000262812 COL11A1P12107 1806 aaPredicted RBP21.57■■□□□ 1.04
COPE-201ENST00000262812 RBBP6Q7Z6E9 1792 aaKnown RBP21.56■■□□□ 1.04
COPE-201ENST00000262812 ERICH2A1L162 156 aa21.56■■□□□ 1.04
COPE-201ENST00000262812 ICAM1P05362 532 aa21.56■■□□□ 1.04
COPE-201ENST00000262812 CYBAP13498 195 aa21.56■■□□□ 1.04
COPE-201ENST00000262812 CAPN2P17655 700 aa21.56■■□□□ 1.04
COPE-201ENST00000262812 ANO1Q5XXA6 986 aa21.56■■□□□ 1.04
COPE-201ENST00000262812 CREB3L3Q68CJ9 461 aa21.56■■□□□ 1.04
COPE-201ENST00000262812 SENP2Q9HC62 589 aa21.56■■□□□ 1.04
COPE-201ENST00000262812 VAT1LQ9HCJ6 419 aa21.56■■□□□ 1.04
COPE-201ENST00000262812 DDX20Q9UHI6 824 aaKnown RBP21.56■■□□□ 1.04
COPE-201ENST00000262812 DNAJC25-GNG10A0A024R161 153 aa21.55■■□□□ 1.04
COPE-201ENST00000262812 PARP1P09874 1014 aaKnown RBP21.55■■□□□ 1.04
COPE-201ENST00000262812 CNTN2Q02246 1040 aa21.55■■□□□ 1.04
COPE-201ENST00000262812 NECTIN1Q15223 517 aa21.55■■□□□ 1.04
COPE-201ENST00000262812 A1CFQ9NQ94 594 aaKnown RBP21.55■■□□□ 1.04
COPE-201ENST00000262812 LAMA4Q16363 1823 aa21.55■■□□□ 1.04
COPE-201ENST00000262812 POTEB2H3BUK9 544 aa21.54■■□□□ 1.04
COPE-201ENST00000262812 DHX16O60231 1041 aaKnown RBP21.54■■□□□ 1.04
COPE-201ENST00000262812 WTAPQ15007 396 aa21.54■■□□□ 1.04
COPE-201ENST00000262812 SART3Q15020 963 aaKnown RBP21.54■■□□□ 1.04
COPE-201ENST00000262812 TMEM67Q5HYA8 995 aa21.54■■□□□ 1.04
COPE-201ENST00000262812 ERICH6BQ5W0A0 696 aa21.54■■□□□ 1.04
COPE-201ENST00000262812 NSMFQ6X4W1 530 aa21.54■■□□□ 1.04
COPE-201ENST00000262812 NECAB2Q7Z6G3 386 aa21.54■■□□□ 1.04
COPE-201ENST00000262812 MYCNP04198 464 aaPredicted RBP21.53■■□□□ 1.04
COPE-201ENST00000262812 MNX1P50219 401 aaPredicted RBP21.53■■□□□ 1.04
COPE-201ENST00000262812 ANTXR2P58335 489 aa21.53■■□□□ 1.04
COPE-201ENST00000262812 ASPRV1Q53RT3 343 aa21.53■■□□□ 1.04
COPE-201ENST00000262812 MB21D2Q8IYB1 491 aaPredicted RBP21.53■■□□□ 1.04
COPE-201ENST00000262812 ADGRF4Q8IZF3 695 aa21.53■■□□□ 1.04
COPE-201ENST00000262812 ANKLE1Q8NAG6 615 aa21.53■■□□□ 1.04
COPE-201ENST00000262812 HTATIP2Q9BUP3 242 aa21.53■■□□□ 1.04
COPE-201ENST00000262812 SEPT4O43236 478 aa21.52■■□□□ 1.04
COPE-201ENST00000262812 PRC1O43663 620 aa21.52■■□□□ 1.04
COPE-201ENST00000262812 MSCO60682 206 aa21.52■■□□□ 1.04
COPE-201ENST00000262812 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.52■■□□□ 1.04
COPE-201ENST00000262812 STAG2Q8N3U4 1231 aa21.52■■□□□ 1.04
COPE-201ENST00000262812 IGDCC4Q8TDY8 1250 aa21.52■■□□□ 1.04
COPE-201ENST00000262812 GPHNQ9NQX3 736 aaPredicted RBP21.52■■□□□ 1.04
COPE-201ENST00000262812 CNPY2Q9Y2B0 182 aa21.52■■□□□ 1.04
COPE-201ENST00000262812 ZNF236Q9UL36 1845 aa21.51■■□□□ 1.03
COPE-201ENST00000262812 SNAI1O95863 264 aaPredicted RBP21.51■■□□□ 1.03
COPE-201ENST00000262812 USH1GQ495M9 461 aa21.51■■□□□ 1.03
COPE-201ENST00000262812 FGD4Q96M96 766 aa21.51■■□□□ 1.03
COPE-201ENST00000262812 PURBQ96QR8 312 aaKnown RBP21.51■■□□□ 1.03
COPE-201ENST00000262812 C11orf49Q9H6J7 331 aa21.51■■□□□ 1.03
COPE-201ENST00000262812 CYP39A1Q9NYL5 469 aa21.51■■□□□ 1.03
COPE-201ENST00000262812 SOWAHBA6NEL2 793 aa21.5■■□□□ 1.03
COPE-201ENST00000262812 KLRF2D3W0D1 207 aa21.5■■□□□ 1.03
COPE-201ENST00000262812 NFIBO00712 420 aa21.5■■□□□ 1.03
COPE-201ENST00000262812 BAATQ14032 418 aaPredicted RBP21.5■■□□□ 1.03
COPE-201ENST00000262812 COL9A3Q14050 684 aaPredicted RBP21.5■■□□□ 1.03
COPE-201ENST00000262812 CDC37Q16543 378 aaPredicted RBP21.5■■□□□ 1.03
COPE-201ENST00000262812 RNF20Q5VTR2 975 aa21.5■■□□□ 1.03
COPE-201ENST00000262812 ZNF467Q7Z7K2 595 aaPredicted RBP21.5■■□□□ 1.03
COPE-201ENST00000262812 FAM133AQ8N9E0 248 aa21.5■■□□□ 1.03
COPE-201ENST00000262812 JMJD4Q9H9V9 463 aa21.5■■□□□ 1.03
COPE-201ENST00000262812 MAD2L2Q9UI95 211 aa21.5■■□□□ 1.03
COPE-201ENST00000262812 ZHX1Q9UKY1 873 aaPredicted RBP21.5■■□□□ 1.03
COPE-201ENST00000262812 PFASO15067 1338 aa21.5■■□□□ 1.03
COPE-201ENST00000262812 PTPDC1A2A3K4 754 aa21.49■■□□□ 1.03
COPE-201ENST00000262812 ZNF865P0CJ78 1059 aaPredicted RBP21.49■■□□□ 1.03
COPE-201ENST00000262812 MCM5P33992 734 aa21.49■■□□□ 1.03
COPE-201ENST00000262812 GJC2Q5T442 439 aaPredicted RBP21.49■■□□□ 1.03
COPE-201ENST00000262812 PRPF38BQ5VTL8 546 aaKnown RBP21.49■■□□□ 1.03
COPE-201ENST00000262812 MAMDC4Q6UXC1 1216 aa21.49■■□□□ 1.03
COPE-201ENST00000262812 CATIPQ7Z7H3 387 aa21.49■■□□□ 1.03
COPE-201ENST00000262812 CCDC144CPQ8IYA2 1237 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms