RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 CCDC197Q8NCU1 140 aa11.17□□□□□ -0.62
PKD1-201ENST00000262304 DNAJC17Q9NVM6 304 aaKnown RBP11.17□□□□□ -0.62
PKD1-201ENST00000262304 MYH8P13535 1937 aa11.17□□□□□ -0.62
PKD1-201ENST00000262304 PARP1P09874 1014 aaKnown RBP11.17□□□□□ -0.62
PKD1-201ENST00000262304 GRAMD1BQ3KR37 738 aa11.17□□□□□ -0.62
PKD1-201ENST00000262304 DZIP3Q86Y13 1208 aaKnown RBP11.17□□□□□ -0.62
PKD1-201ENST00000262304 LRRC8CQ8TDW0 803 aa11.17□□□□□ -0.62
PKD1-201ENST00000262304 SHANK2Q9UPX8 1470 aa11.17□□□□□ -0.62
PKD1-201ENST00000262304 ZNF202O95125 648 aa11.17□□□□□ -0.62
PKD1-201ENST00000262304 NCF2P19878 526 aaPredicted RBP11.17□□□□□ -0.62
PKD1-201ENST00000262304 CFAP43Q8NDM7 1665 aa11.17□□□□□ -0.62
PKD1-201ENST00000262304 ARID1BQ8NFD5 2236 aaPredicted RBP11.17□□□□□ -0.62
PKD1-201ENST00000262304 SESTD1Q86VW0 696 aa11.17□□□□□ -0.62
PKD1-201ENST00000262304 NDUFB9Q9Y6M9 179 aa11.17□□□□□ -0.62
PKD1-201ENST00000262304 MAN1A2O60476 641 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 RFX8Q6ZV50 586 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 IRX4P78413 519 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 ACBD5Q5T8D3 534 aaPredicted RBP11.16□□□□□ -0.62
PKD1-201ENST00000262304 OTUD7AQ8TE49 926 aaPredicted RBP11.16□□□□□ -0.62
PKD1-201ENST00000262304 PARP3Q9Y6F1 533 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 RAPH1Q70E73 1250 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 ANKRD13CQ8N6S4 541 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 RIC8AQ9NPQ8 531 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 KCNA6P17658 529 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 PARD3BQ8TEW8 1205 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 ARHGAP45Q92619 1136 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 EXT2Q93063 718 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 B4E1Z4 1266 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 NLRP12P59046 1061 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 ESRRGP62508 458 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 ACTN3Q08043 901 aaPredicted RBP11.16□□□□□ -0.62
PKD1-201ENST00000262304 VWA3BQ502W6 1294 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 ARMC9Q7Z3E5 817 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 SCOCQ9UIL1 159 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 DYTNA2CJ06 578 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 CALML3P27482 149 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 KSR2Q6VAB6 950 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 KCNJ14Q9UNX9 436 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 SMAD5Q99717 465 aaKnown RBP11.16□□□□□ -0.62
PKD1-201ENST00000262304 THEGQ9P2T0 379 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 PCYT1AP49585 367 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 KLHL30Q0D2K2 578 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 CNNM4Q6P4Q7 775 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 USP28Q96RU2 1077 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 ITM2BQ9Y287 266 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 CCDC195A0A1B0GUA6 201 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 TFCP2Q12800 502 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 C8orf34Q49A92 452 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 PPFIA4O75335 1185 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 S100BP04271 92 aaPredicted RBP11.16□□□□□ -0.62
PKD1-201ENST00000262304 CCDC92Q53HC0 331 aaPredicted RBP11.16□□□□□ -0.62
PKD1-201ENST00000262304 GOLGA5Q8TBA6 731 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 ZFYVE9O95405 1425 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 CAPN11Q9UMQ6 739 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 GFAPP14136 432 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 ANGPTL8Q6UXH0 198 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 SCINQ9Y6U3 715 aa11.16□□□□□ -0.62
PKD1-201ENST00000262304 DCAF5Q96JK2 942 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 TSR3Q9UJK0 312 aaKnown RBP11.15□□□□□ -0.62
PKD1-201ENST00000262304 CREB3O43889 395 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 KLHL29Q96CT2 875 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 ZCWPW1Q9H0M4 648 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 MTHFSDQ2M296 383 aaKnown RBP11.15□□□□□ -0.62
PKD1-201ENST00000262304 SAR1BQ9Y6B6 198 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 ART3Q13508 389 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 ARHGEF35A5YM69 484 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 C2orf54Q08AI8 447 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 GNPTABQ3T906 1256 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 RNF169Q8NCN4 708 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 ALKBH8Q96BT7 664 aaKnown RBP11.15□□□□□ -0.62
PKD1-201ENST00000262304 NFE2L3Q9Y4A8 694 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 CNNM2Q9H8M5 875 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 GOLGA8KD6RF30 607 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 LPXNO60711 386 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 TTC4O95801 387 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 RPL13P26373 211 aaKnown RBP11.15□□□□□ -0.62
PKD1-201ENST00000262304 TMTC3Q6ZXV5 915 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 ZFXP17010 805 aaPredicted RBP11.15□□□□□ -0.62
PKD1-201ENST00000262304 LGSNQ5TDP6 509 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 RIOK1Q9BRS2 568 aaKnown RBP11.15□□□□□ -0.62
PKD1-201ENST00000262304 CENPKQ9BS16 269 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 AMFRQ9UKV5 643 aa11.15□□□□□ -0.62
PKD1-201ENST00000262304 ERFP50548 548 aa11.15□□□□□ -0.63
PKD1-201ENST00000262304 DDX28Q9NUL7 540 aaKnown RBP11.15□□□□□ -0.63
PKD1-201ENST00000262304 SUN1O94901 812 aa11.15□□□□□ -0.63
PKD1-201ENST00000262304 ARHGAP4P98171 946 aa11.15□□□□□ -0.63
PKD1-201ENST00000262304 LBHD1Q9BQE6 289 aaPredicted RBP11.15□□□□□ -0.63
PKD1-201ENST00000262304 ENC1O14682 589 aa11.15□□□□□ -0.63
PKD1-201ENST00000262304 ARHGEF9O43307 516 aa11.15□□□□□ -0.63
PKD1-201ENST00000262304 TUBB4AP04350 444 aa11.15□□□□□ -0.63
PKD1-201ENST00000262304 CDC37L1Q7L3B6 337 aa11.15□□□□□ -0.63
PKD1-201ENST00000262304 STRIP2Q9ULQ0 834 aa11.14□□□□□ -0.63
PKD1-201ENST00000262304 EHHADHQ08426 723 aa11.14□□□□□ -0.63
PKD1-201ENST00000262304 ANKRD20A4Q4UJ75 823 aa11.14□□□□□ -0.63
PKD1-201ENST00000262304 ANKRD20A8PQ5CZ79 823 aa11.14□□□□□ -0.63
PKD1-201ENST00000262304 HERC4Q5GLZ8 1057 aaPredicted RBP11.14□□□□□ -0.63
PKD1-201ENST00000262304 ANKRD20A2Q5SQ80 823 aa11.14□□□□□ -0.63
PKD1-201ENST00000262304 ANKRD20A1Q5TYW2 823 aa11.14□□□□□ -0.63
PKD1-201ENST00000262304 V9GY48 417 aaPredicted RBP11.14□□□□□ -0.63
PKD1-201ENST00000262304 ATF2P15336 505 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms