RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 FAM153BP0C7A2 387 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 SCTRP47872 440 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 CARSP49589 748 aaKnown RBP8.04□□□□□ -1.12
CSDE1-201ENST00000261443 PPARDQ03181 441 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 ITGB3BPQ13352 177 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-201ENST00000261443 FAM153CQ494X1 144 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 AP1ARQ63HQ0 302 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 RCSD1Q6JBY9 416 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 NFRKBQ6P4R8 1299 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 MAATS1Q7Z4T9 603 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 CCDC170Q8IYT3 715 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 ABTB2Q8N961 1025 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 NKX2-3Q8TAU0 364 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 SPDL1Q96EA4 605 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 OSBPL9Q96SU4 736 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 KIF9Q9HAQ2 790 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 GPR108Q9NPR9 543 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 EHD2Q9NZN4 543 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 LRWD1Q9UFC0 647 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 FAM153AQ9UHL3 310 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 MAPK8IP1Q9UQF2 711 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 EID1Q9Y6B2 187 aa8.04□□□□□ -1.12
CSDE1-201ENST00000261443 STK36Q9NRP7 1315 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 COL18A1P39060 1754 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 GOLGA6L10A6NI86 522 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 ATP5J2-PTCD1G3V325 749 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 GPAA1O43292 621 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 BUB1BO60566 1050 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-201ENST00000261443 USO1O60763 962 aaKnown RBP8.03□□□□□ -1.12
CSDE1-201ENST00000261443 PTCD1O75127 700 aaKnown RBP8.03□□□□□ -1.12
CSDE1-201ENST00000261443 PRLRP16471 622 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 TCP1P17987 556 aaKnown RBP8.03□□□□□ -1.12
CSDE1-201ENST00000261443 GUCY2FP51841 1108 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 INHBEP58166 350 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 PAK2Q13177 524 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 SPA17Q15506 151 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 MEA1Q16626 185 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 TMEM67Q5HYA8 995 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 MSL1Q68DK7 614 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 C14orf37Q86TY3 774 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 TBC1D10CQ8IV04 446 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 CD302Q8IX05 232 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 TRIM22Q8IYM9 498 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 CCDC82Q8N4S0 544 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 ARFGAP2Q8N6H7 521 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 MAB21L3Q8N8X9 362 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 APPBP2Q92624 585 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 HOOK2Q96ED9 719 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 TMEM87BQ96K49 555 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 BATF3Q9NR55 127 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 BAIAP2L1Q9UHR4 511 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 HYOU1Q9Y4L1 999 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 SLC12A7Q9Y666 1083 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 MYH10P35580 1976 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 A0A1W2PQC6 194 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 LGALS16A8MUM7 142 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 MGRN1O60291 552 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 TRIM21P19474 475 aaKnown RBP8.03□□□□□ -1.12
CSDE1-201ENST00000261443 PEX19P40855 299 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 XRCC4Q13426 336 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 NBPF9Q3BBW0 867 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 ACCSLQ4AC99 568 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 CACNA2D3Q8IZS8 1091 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 PIK3R5Q8WYR1 880 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 LRRC59Q96AG4 307 aaKnown RBP8.03□□□□□ -1.12
CSDE1-201ENST00000261443 SH3GL3Q99963 347 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 EPB41L5Q9HCM4 733 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 RBM12Q9NTZ6 932 aaKnown RBP8.03□□□□□ -1.12
CSDE1-201ENST00000261443 AGPAT5Q9NUQ2 364 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 TBC1D2BQ9UPU7 963 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 CAPN6Q9Y6Q1 641 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 ESYT3A0FGR9 886 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 TRIM75PA6NK02 468 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 NUTM2BA6NNL0 878 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-201ENST00000261443 NUTM2EB1AL46 878 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-201ENST00000261443 H7C1D1 291 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 MOCS3O95396 460 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 ATP6V1G2O95670 118 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 GLI1P08151 1106 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 IL15P40933 162 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-201ENST00000261443 GUCY2DQ02846 1103 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 QPCTQ16769 361 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 C3orf20Q8ND61 904 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 OXER1Q8TDS5 423 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 IGDCC4Q8TDY8 1250 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 SEC16BQ96JE7 1060 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 LY9Q9HBG7 655 aa8.03□□□□□ -1.12
CSDE1-201ENST00000261443 GOLGB1Q14789 3259 aaKnown RBP8.02□□□□□ -1.13
CSDE1-201ENST00000261443 EME2A4GXA9 379 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-201ENST00000261443 HEXIM1O94992 359 aaKnown RBP8.02□□□□□ -1.13
CSDE1-201ENST00000261443 IFNAR1P17181 557 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 THEMISQ8N1K5 641 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-201ENST00000261443 NOC3LQ8WTT2 800 aaKnown RBP8.02□□□□□ -1.13
CSDE1-201ENST00000261443 NSMCE1Q8WV22 266 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 LMBR1Q8WVP7 490 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 HVCN1Q96D96 273 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 THOC1Q96FV9 657 aaKnown RBP8.02□□□□□ -1.13
CSDE1-201ENST00000261443 CCDC42Q96M95 316 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 MLXIPQ9HAP2 919 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 NOD2Q9HC29 1040 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms