RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 REXO1Q8N1G1 1221 aaKnown RBP25.51■■□□□ 1.67
SIX3-201ENST00000260653 BIN2Q9UBW5 565 aaPredicted RBP25.51■■□□□ 1.67
SIX3-201ENST00000260653 QRICH1Q2TAL8 776 aa25.51■■□□□ 1.67
SIX3-201ENST00000260653 KIAA1755Q5JYT7 1200 aa25.51■■□□□ 1.67
SIX3-201ENST00000260653 FERMT2Q96AC1 680 aa25.51■■□□□ 1.67
SIX3-201ENST00000260653 SYNPO2Q9UMS6 1093 aa25.51■■□□□ 1.67
SIX3-201ENST00000260653 TMX2Q9Y320 296 aa25.51■■□□□ 1.67
SIX3-201ENST00000260653 H7C1D1 291 aa25.5■■□□□ 1.67
SIX3-201ENST00000260653 BMP3P12645 472 aa25.5■■□□□ 1.67
SIX3-201ENST00000260653 ADCY7P51828 1080 aa25.5■■□□□ 1.67
SIX3-201ENST00000260653 KRT25Q7Z3Z0 450 aa25.5■■□□□ 1.67
SIX3-201ENST00000260653 ANP32BQ92688 251 aaKnown RBP25.5■■□□□ 1.67
SIX3-201ENST00000260653 TIGD1Q96MW7 591 aa25.5■■□□□ 1.67
SIX3-201ENST00000260653 TMEM260Q9NX78 707 aa25.5■■□□□ 1.67
SIX3-201ENST00000260653 FAM13BQ9NYF5 915 aa25.5■■□□□ 1.67
SIX3-201ENST00000260653 A0A087WWV3 80 aa25.5■■□□□ 1.67
SIX3-201ENST00000260653 TMEM232C9JQI7 657 aa25.5■■□□□ 1.67
SIX3-201ENST00000260653 CDC37Q16543 378 aaPredicted RBP25.5■■□□□ 1.67
SIX3-201ENST00000260653 JAKMIP3Q5VZ66 844 aa25.5■■□□□ 1.67
SIX3-201ENST00000260653 CCDC84Q86UT8 332 aaPredicted RBP25.5■■□□□ 1.67
SIX3-201ENST00000260653 SYT17Q9BSW7 474 aa25.5■■□□□ 1.67
SIX3-201ENST00000260653 DEFB129Q9H1M3 183 aa25.5■■□□□ 1.67
SIX3-201ENST00000260653 IKQ13123 557 aaPredicted RBP25.49■■□□□ 1.67
SIX3-201ENST00000260653 PPP1R18Q6NYC8 613 aa25.49■■□□□ 1.67
SIX3-201ENST00000260653 TRPM4Q8TD43 1214 aa25.49■■□□□ 1.67
SIX3-201ENST00000260653 GPRC5DQ9NZD1 345 aa25.49■■□□□ 1.67
SIX3-201ENST00000260653 VWA3AA6NCI4 1184 aa25.48■■□□□ 1.67
SIX3-201ENST00000260653 PHF20L1A8MW92 1017 aa25.48■■□□□ 1.67
SIX3-201ENST00000260653 NONOQ15233 471 aaKnown RBP eCLIP25.48■■□□□ 1.67
SIX3-201ENST00000260653 GPC2Q8N158 579 aa25.48■■□□□ 1.67
SIX3-201ENST00000260653 ATAD5Q96QE3 1844 aa25.48■■□□□ 1.67
SIX3-201ENST00000260653 LONRF3Q496Y0 759 aa25.48■■□□□ 1.67
SIX3-201ENST00000260653 C4orf32Q8N8J7 132 aa25.48■■□□□ 1.67
SIX3-201ENST00000260653 GLIS2Q9BZE0 524 aaPredicted RBP25.48■■□□□ 1.67
SIX3-201ENST00000260653 DNAJC25Q9H1X3 360 aa25.48■■□□□ 1.67
SIX3-201ENST00000260653 SNAP25P60880 206 aa25.47■■□□□ 1.67
SIX3-201ENST00000260653 FAM200AQ8TCP9 573 aa25.47■■□□□ 1.67
SIX3-201ENST00000260653 KIAA1468Q9P260 1216 aa25.47■■□□□ 1.67
SIX3-201ENST00000260653 ASNSP08243 561 aa25.47■■□□□ 1.67
SIX3-201ENST00000260653 ZYXQ15942 572 aaKnown RBP25.47■■□□□ 1.67
SIX3-201ENST00000260653 EPSTI1Q96J88 318 aa25.47■■□□□ 1.67
SIX3-201ENST00000260653 GOPCQ9HD26 462 aa25.47■■□□□ 1.67
SIX3-201ENST00000260653 RIC8AQ9NPQ8 531 aa25.47■■□□□ 1.67
SIX3-201ENST00000260653 POLR2DO15514 142 aaKnown RBP25.46■■□□□ 1.67
SIX3-201ENST00000260653 IL17AQ16552 155 aa25.46■■□□□ 1.67
SIX3-201ENST00000260653 SYDE2Q5VT97 1194 aa25.46■■□□□ 1.67
SIX3-201ENST00000260653 ANGEL2Q5VTE6 544 aaKnown RBP25.46■■□□□ 1.67
SIX3-201ENST00000260653 KRBA2Q6ZNG9 492 aa25.46■■□□□ 1.67
SIX3-201ENST00000260653 PDILTQ8N807 584 aa25.46■■□□□ 1.67
SIX3-201ENST00000260653 STX1AQ16623 288 aa25.46■■□□□ 1.67
SIX3-201ENST00000260653 TBCKQ8TEA7 893 aa25.46■■□□□ 1.67
SIX3-201ENST00000260653 SYMPKQ92797 1274 aaKnown RBP25.46■■□□□ 1.67
SIX3-201ENST00000260653 UBE2SQ16763 222 aa25.45■■□□□ 1.67
SIX3-201ENST00000260653 UVSSAQ2YD98 709 aa25.45■■□□□ 1.67
SIX3-201ENST00000260653 NBPF12Q5TAG4 269 aaPredicted RBP25.45■■□□□ 1.67
SIX3-201ENST00000260653 EPS15P42566 896 aa25.45■■□□□ 1.66
SIX3-201ENST00000260653 CCDC173Q0VFZ6 552 aa25.45■■□□□ 1.66
SIX3-201ENST00000260653 LETM2Q2VYF4 491 aa25.45■■□□□ 1.66
SIX3-201ENST00000260653 CNNM3Q8NE01 707 aa25.45■■□□□ 1.66
SIX3-201ENST00000260653 TMEM60Q9H2L4 133 aa25.45■■□□□ 1.66
SIX3-201ENST00000260653 PCDHA1Q9Y5I3 950 aa25.45■■□□□ 1.66
SIX3-201ENST00000260653 YBX3P16989 372 aaKnown RBP eCLIP25.44■■□□□ 1.66
SIX3-201ENST00000260653 FAM83BQ5T0W9 1011 aa25.44■■□□□ 1.66
SIX3-201ENST00000260653 BTNL9Q6UXG8 535 aa25.44■■□□□ 1.66
SIX3-201ENST00000260653 C11orf57Q6ZUT1 292 aaPredicted RBP25.44■■□□□ 1.66
SIX3-201ENST00000260653 NEK8Q86SG6 692 aa25.44■■□□□ 1.66
SIX3-201ENST00000260653 VCPKMTQ9H867 229 aa25.44■■□□□ 1.66
SIX3-201ENST00000260653 CBX8Q9HC52 389 aa25.44■■□□□ 1.66
SIX3-201ENST00000260653 ARL6IP4Q66PJ3 421 aaKnown RBP25.44■■□□□ 1.66
SIX3-201ENST00000260653 LUZP1Q86V48 1076 aa25.44■■□□□ 1.66
SIX3-201ENST00000260653 CUL5Q93034 780 aa25.44■■□□□ 1.66
SIX3-201ENST00000260653 A0A087X0B3 334 aa25.43■■□□□ 1.66
SIX3-201ENST00000260653 PPP1R9BQ96SB3 815 aa25.43■■□□□ 1.66
SIX3-201ENST00000260653 CCNT1O60563 726 aaKnown RBP25.43■■□□□ 1.66
SIX3-201ENST00000260653 ZNF165P49910 485 aa25.43■■□□□ 1.66
SIX3-201ENST00000260653 STAT2P52630 851 aa25.43■■□□□ 1.66
SIX3-201ENST00000260653 PNOCQ13519 176 aa25.43■■□□□ 1.66
SIX3-201ENST00000260653 PSTPIP2Q9H939 334 aa25.43■■□□□ 1.66
SIX3-201ENST00000260653 USP25Q9UHP3 1055 aa25.43■■□□□ 1.66
SIX3-201ENST00000260653 PRAMEF18Q5VWM3 479 aa25.42■■□□□ 1.66
SIX3-201ENST00000260653 GGA3Q9NZ52 723 aa25.42■■□□□ 1.66
SIX3-201ENST00000260653 RNF181Q9P0P0 153 aa25.42■■□□□ 1.66
SIX3-201ENST00000260653 SERTAD1Q9UHV2 236 aa25.42■■□□□ 1.66
SIX3-201ENST00000260653 PRR12Q9ULL5 1215 aa25.42■■□□□ 1.66
SIX3-201ENST00000260653 FOXN1O15353 648 aa25.42■■□□□ 1.66
SIX3-201ENST00000260653 CLK2P49760 499 aaKnown RBP25.42■■□□□ 1.66
SIX3-201ENST00000260653 HIRAP54198 1017 aaPredicted RBP25.42■■□□□ 1.66
SIX3-201ENST00000260653 SH2D4AQ9H788 454 aa25.42■■□□□ 1.66
SIX3-201ENST00000260653 BIN1O00499 593 aa25.41■■□□□ 1.66
SIX3-201ENST00000260653 DDNO94850 711 aaPredicted RBP25.41■■□□□ 1.66
SIX3-201ENST00000260653 APOBEC3FQ8IUX4 373 aaKnown RBP25.41■■□□□ 1.66
SIX3-201ENST00000260653 ZNF341Q9BYN7 854 aa25.41■■□□□ 1.66
SIX3-201ENST00000260653 ANO10Q9NW15 660 aa25.41■■□□□ 1.66
SIX3-201ENST00000260653 TAL1P17542 331 aaPredicted RBP25.41■■□□□ 1.66
SIX3-201ENST00000260653 MRPL12P52815 198 aaKnown RBP25.41■■□□□ 1.66
SIX3-201ENST00000260653 AMNQ9BXJ7 453 aa25.41■■□□□ 1.66
SIX3-201ENST00000260653 ACTN4O43707 911 aaKnown RBP25.4■■□□□ 1.66
SIX3-201ENST00000260653 USH1GQ495M9 461 aa25.4■■□□□ 1.66
SIX3-201ENST00000260653 PDLIM2Q96JY6 352 aa25.4■■□□□ 1.66
SIX3-201ENST00000260653 FBXO11Q86XK2 927 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms