RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 MOCS3O95396 460 aa14.8□□□□□ -0.04
TUBGCP4-201ENST00000260383 KLK7P49862 253 aa14.8□□□□□ -0.04
TUBGCP4-201ENST00000260383 SNX1Q13596 522 aa14.8□□□□□ -0.04
TUBGCP4-201ENST00000260383 TSR1Q2NL82 804 aaKnown RBP14.8□□□□□ -0.04
TUBGCP4-201ENST00000260383 RABL6Q3YEC7 729 aaPredicted RBP14.8□□□□□ -0.04
TUBGCP4-201ENST00000260383 LMBR1LQ6UX01 489 aa14.8□□□□□ -0.04
TUBGCP4-201ENST00000260383 CMTR1Q8N1G2 835 aaKnown RBP14.8□□□□□ -0.04
TUBGCP4-201ENST00000260383 NELFBQ8WX92 580 aa14.8□□□□□ -0.04
TUBGCP4-201ENST00000260383 CABP5Q9NP86 173 aa14.8□□□□□ -0.04
TUBGCP4-201ENST00000260383 ETAA1Q9NY74 926 aa14.8□□□□□ -0.04
TUBGCP4-201ENST00000260383 L3MBTL1Q9Y468 752 aa14.8□□□□□ -0.04
TUBGCP4-201ENST00000260383 TOPAZ1Q8N9V7 1692 aa14.8□□□□□ -0.04
TUBGCP4-201ENST00000260383 HEG1Q9ULI3 1381 aa14.8□□□□□ -0.04
TUBGCP4-201ENST00000260383 B4E1Z4 1266 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 ITIH3Q06033 890 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 MEA1Q16626 185 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 PPP4R3AQ6IN85 833 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 NFXL1Q6ZNB6 911 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 BZW1Q7L1Q6 419 aaKnown RBP14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 CCDC26Q8TAB7 109 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 RUBCNQ92622 972 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 HOOK2Q96ED9 719 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 MS4A14Q96JA4 679 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 METTL22Q9BUU2 404 aaPredicted RBP14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 EPB41L5Q9HCM4 733 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 BCL9LQ86UU0 1499 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 TRIM49BA6NDI0 452 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 RNMTO43148 476 aaKnown RBP14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 BUB1BO60566 1050 aaPredicted RBP14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 CYLC1P35663 651 aaPredicted RBP14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 CEBPAP49715 358 aaPredicted RBP14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 SPAG1Q07617 926 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 SSRP1Q08945 709 aaKnown RBP14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 KIF5AQ12840 1032 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 PAK1Q13153 545 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 GLE1Q53GS7 698 aaKnown RBP14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 HIBCHQ6NVY1 386 aaPredicted RBP14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 RWDD2AQ9UIY3 292 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 DDX60Q8IY21 1712 aaKnown RBP14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 TRAPPC3O43617 180 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 PLEKP08567 350 aaPredicted RBP14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 PARP1P09874 1014 aaKnown RBP14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 TNFRSF8P28908 595 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 GUCY2DQ02846 1103 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 SAFBQ15424 915 aaKnown RBP eCLIP14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 CCDC181Q5TID7 509 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 MAATS1Q7Z4T9 603 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 CD302Q8IX05 232 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 OR2W6PQ8NHA6 318 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 CUL5Q93034 780 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 HVCN1Q96D96 273 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 EBF2Q9HAK2 575 aa14.79□□□□□ -0.04
TUBGCP4-201ENST00000260383 XDHP47989 1333 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 RASSF10A6NK89 507 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 IFFO1Q0D2I5 559 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 CCDC96Q2M329 555 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 LACTB2Q53H82 288 aaPredicted RBP14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 AKAP4Q5JQC9 854 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 UBR1Q8IWV7 1749 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 SPDYE1Q8NFV5 336 aaPredicted RBP14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 ZNF507Q8TCN5 953 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 PLAAQ9Y263 795 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 GDAQ9Y2T3 454 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 MYH10P35580 1976 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 HMGB1P1B2RPK0 211 aaPredicted RBP14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 WNT7AO00755 349 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 ICA1Q05084 483 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 PPP1R7Q15435 360 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 LRRC24Q50LG9 513 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 GPIHBP1Q8IV16 184 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 IGDCC4Q8TDY8 1250 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 CCT6BQ92526 530 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 SAAL1Q96ER3 474 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 EEF2KMTQ96G04 330 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 MTRQ99707 1265 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 GDF3Q9NR23 364 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 AATFQ9NY61 560 aaKnown RBP eCLIP14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 SLC12A6Q9UHW9 1150 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 TRPC6Q9Y210 931 aa14.78□□□□□ -0.04
TUBGCP4-201ENST00000260383 WDR19Q8NEZ3 1342 aa14.77□□□□□ -0.04
TUBGCP4-201ENST00000260383 A0A087WZG4 1122 aa14.77□□□□□ -0.04
TUBGCP4-201ENST00000260383 HEXIM1O94992 359 aaKnown RBP14.77□□□□□ -0.04
TUBGCP4-201ENST00000260383 IPO7O95373 1038 aaKnown RBP14.77□□□□□ -0.04
TUBGCP4-201ENST00000260383 FMNL1O95466 1100 aaPredicted RBP14.77□□□□□ -0.04
TUBGCP4-201ENST00000260383 ANP32DO95626 131 aa14.77□□□□□ -0.04
TUBGCP4-201ENST00000260383 SF3A3Q12874 501 aaKnown RBP eCLIP14.77□□□□□ -0.04
TUBGCP4-201ENST00000260383 THEMIS2Q5TEJ8 643 aa14.77□□□□□ -0.04
TUBGCP4-201ENST00000260383 CHADLQ6NUI6 762 aa14.77□□□□□ -0.04
TUBGCP4-201ENST00000260383 IFT20Q8IY31 132 aa14.77□□□□□ -0.04
TUBGCP4-201ENST00000260383 TRIM58Q8NG06 486 aa14.77□□□□□ -0.04
TUBGCP4-201ENST00000260383 TMBIM4Q9HC24 238 aa14.77□□□□□ -0.04
TUBGCP4-201ENST00000260383 SH3BP1Q9Y3L3 701 aa14.77□□□□□ -0.04
TUBGCP4-201ENST00000260383 MYH13Q9UKX3 1938 aa14.77□□□□□ -0.05
TUBGCP4-201ENST00000260383 SRRM3A6NNA2 597 aaPredicted RBP14.77□□□□□ -0.05
TUBGCP4-201ENST00000260383 LGALS16A8MUM7 142 aa14.77□□□□□ -0.05
TUBGCP4-201ENST00000260383 PHF20L1A8MW92 1017 aa14.77□□□□□ -0.05
TUBGCP4-201ENST00000260383 GPAA1O43292 621 aa14.77□□□□□ -0.05
TUBGCP4-201ENST00000260383 ZPR1O75312 459 aa14.77□□□□□ -0.05
TUBGCP4-201ENST00000260383 PMS1P54277 932 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms