RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 CELF1Q92879 486 aaKnown RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 HPS3Q969F9 1004 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 RRP36Q96EU6 259 aaKnown RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 CNOT6LQ96LI5 555 aaKnown RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 PNKPQ96T60 521 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 TMX4Q9H1E5 349 aaPredicted RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 GPCPD1Q9NPB8 672 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 SETD1AO15047 1707 aaKnown RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 GOLGA6BA6NDN3 693 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 KLRF2D3W0D1 207 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 FGFR1OPO95684 399 aaKnown RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 GNA11P29992 359 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 MAGEA1P43355 309 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 DNM2P50570 870 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 DPYDQ12882 1025 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 TUBB2AQ13885 445 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 NONOQ15233 471 aaKnown RBP eCLIP5.29□□□□□ -1.56
USP44-201ENST00000258499 KRT79Q5XKE5 535 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 SV2BQ7L1I2 683 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 STAG2Q8N3U4 1231 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 FAM76AQ8TAV0 307 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 GPR101Q96P66 508 aaPredicted RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 TUBB2BQ9BVA1 445 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 CACNA1FO60840 1977 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 GOLGA6CA6NDK9 693 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 PPP1R3GB7ZBB8 358 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 WNT7AO00755 349 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 GNPATO15228 680 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 RNF40O75150 1001 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 LDHCP07864 332 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 GOLGA6DP0CG33 693 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 VEGFAP15692 232 aaPredicted RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 PLCG1P19174 1290 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 ACTN2P35609 894 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 LONP1P36776 959 aaKnown RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 RBM5P52756 815 aaKnown RBP eCLIP5.29□□□□□ -1.56
USP44-201ENST00000258499 TUBB4BP68371 445 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 SLC7A5Q01650 507 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 C2orf54Q08AI8 447 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 UBE4AQ14139 1066 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 LRRC41Q15345 812 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 USP17L2Q6R6M4 530 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 TPTE2Q6XPS3 522 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 KRT26Q7Z3Y9 468 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 TEX11Q8IYF3 940 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 MICALL1Q8N3F8 863 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 RIN2Q8WYP3 895 aaPredicted RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 SPAG5Q96R06 1193 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 PHF20Q9BVI0 1012 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 DCP1AQ9NPI6 582 aaPredicted RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 DISC1Q9NRI5 854 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 GOLGA6AQ9NYA3 693 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 LRWD1Q9UFC0 647 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 FRMPD2Q68DX3 1309 aaPredicted RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 H3BQF6 201 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 HSF2BPO75031 334 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 ABL1P00519 1130 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 ATP1A1P05023 1023 aaKnown RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 TUBBP07437 444 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 ERVK-24P63145 666 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 IRX5P78411 483 aaPredicted RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 ATP2C1P98194 919 aaPredicted RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 MDM2Q00987 491 aaPredicted RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 PRPF4BQ13523 1007 aaKnown RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 RAPGEF1Q13905 1077 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 RNF187Q5TA31 235 aaPredicted RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 MB21D1Q8N884 522 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 SNX29Q8TEQ0 813 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 SMCR8Q8TEV9 937 aaPredicted RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 RPGRQ92834 1020 aaKnown RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 FUT8Q9BYC5 575 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 AGPAT5Q9NUQ2 364 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 ARPP21Q9UBL0 812 aaPredicted RBP5.29□□□□□ -1.56
USP44-201ENST00000258499 XDHP47989 1333 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 PNPLA7Q6ZV29 1317 aa5.29□□□□□ -1.56
USP44-201ENST00000258499 FMN2Q9NZ56 1722 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 TRIM66O15016 1216 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 ZNF185O15231 689 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 OR52Z1P0C646 297 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 SETQ01105 290 aaPredicted RBP5.28□□□□□ -1.56
USP44-201ENST00000258499 TROAPQ12815 778 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 C8orf74Q6P047 294 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 CNNM4Q6P4Q7 775 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 VGLL2Q8N8G2 317 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 GOLGA5Q8TBA6 731 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 EXOC4Q96A65 974 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 ZNF512BQ96KM6 892 aaPredicted RBP5.28□□□□□ -1.56
USP44-201ENST00000258499 NHEJ1Q9H9Q4 299 aaPredicted RBP5.28□□□□□ -1.56
USP44-201ENST00000258499 PCDHA4Q9UN74 947 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 MINPP1Q9UNW1 487 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 ZNF335Q9H4Z2 1342 aaPredicted RBP5.28□□□□□ -1.56
USP44-201ENST00000258499 ZRANB2O95218 330 aaKnown RBP eCLIP5.28□□□□□ -1.56
USP44-201ENST00000258499 KLRK1P26718 216 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 TRAPPC10P48553 1259 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 SARSP49591 514 aaKnown RBP5.28□□□□□ -1.56
USP44-201ENST00000258499 KLK7P49862 253 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 VAV2P52735 878 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 TBX2Q13207 712 aaPredicted RBP5.28□□□□□ -1.56
USP44-201ENST00000258499 NKX1-1Q15270 411 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms