RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 F8W8V4 182 aa14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 XRRA1Q6P2D8 792 aa14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 MAK16Q9BXY0 300 aaKnown RBP14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 LONP1P36776 959 aaKnown RBP14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 CDC37Q16543 378 aaPredicted RBP14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 ANO1Q5XXA6 986 aa14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 PRPF38AQ8NAV1 312 aaKnown RBP14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 USP26Q9BXU7 913 aa14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 CTNND1O60716 968 aaKnown RBP14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 OR52Z1P0C646 297 aa14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 FKBP1BP68106 108 aa14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 FAM47AQ5JRC9 791 aa14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 CHST3Q7LGC8 479 aa14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 TTC39CQ8N584 583 aa14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 CTNNBL1Q8WYA6 563 aaPredicted RBP14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 KPNA6O60684 536 aa14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 DEKP35659 375 aaKnown RBP14.92□□□□□ -0.02
PRPF38A-201ENST00000257181 A0A0G2JLW4 131 aa14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 CDK8P49336 464 aa14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 LRRC47Q8N1G4 583 aaKnown RBP14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 NAP1L3Q99457 506 aaPredicted RBP14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 PCDHA12Q9UN75 941 aa14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 GSTTP1A0A1W2PQM5 241 aa14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 ATP2A2P16615 1042 aaKnown RBP14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 HUNKP57058 714 aa14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 POLA2Q14181 598 aa14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 EAF2Q96CJ1 260 aaPredicted RBP14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 ALX1Q15699 326 aa14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 LRRC2Q9BYS8 371 aa14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 SLC8A2Q9UPR5 921 aa14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 PRAMEF22A3QJZ6 481 aa14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 EPHX2P34913 555 aa14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 ARID5AQ03989 594 aa14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 PROSER3Q2NL68 480 aa14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 TMEM206Q9H813 350 aa14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 DONSONQ9NYP3 566 aa14.91□□□□□ -0.02
PRPF38A-201ENST00000257181 HSPA4P34932 840 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 AFMP43652 599 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 PTPN12Q05209 780 aaKnown RBP14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 HLFQ16534 295 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 RAB11FIP4Q86YS3 637 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 ZNF577Q9BSK1 485 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 C2orf40Q9H1Z8 148 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 PCDHA4Q9UN74 947 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 KRT76Q01546 638 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 ZNF174Q15697 407 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 SLFN12LQ6IEE8 588 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 KIAA1841Q6NSI8 718 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 CHST13Q8NET6 341 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 MAIP1Q8WWC4 291 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 CELF2O95319 508 aaKnown RBP14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 MYL3P08590 195 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 RGS2P41220 211 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 KCNJ6P48051 423 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 VWA3AA6NCI4 1184 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 BIRC2Q13490 618 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 IKBKGQ9Y6K9 419 aa14.9□□□□□ -0.02
PRPF38A-201ENST00000257181 STAM2O75886 525 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 ELF1P32519 619 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 BPIFB4P59827 614 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 GPC2Q8N158 579 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 RNF214Q8ND24 703 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 MAP3K20Q9NYL2 800 aaKnown RBP14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 RNASELQ05823 741 aaKnown RBP14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 KIAA0753Q2KHM9 967 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 FAM102BQ5T8I3 360 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 LRCH2Q5VUJ6 765 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 PAXBP1Q9Y5B6 917 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 GOLGA6L7A0A1B0GV03 622 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 NUDT18Q6ZVK8 323 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 ANKRD36BP1Q96IX9 119 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 HESX1Q9UBX0 185 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 TRAF5O00463 557 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 ZNF189O75820 626 aaPredicted RBP14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 SCARF1Q14162 830 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 C7orf31Q8N865 590 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 MLKLQ8NB16 471 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 CCDC77Q9BR77 488 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 MRPL44Q9H9J2 332 aaKnown RBP14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 LCMT1Q9UIC8 334 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 AKT3Q9Y243 479 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 GINS2Q9Y248 185 aa14.89□□□□□ -0.03
PRPF38A-201ENST00000257181 EXOC3O60645 756 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 FERP16591 822 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 LIFRP42702 1097 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 TPH2Q8IWU9 490 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 NECAB1Q8N987 351 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 RGS22Q8NE09 1264 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 MYOZ2Q9NPC6 264 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 SNX14Q9Y5W7 946 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 COL5A2P05997 1499 aaPredicted RBP14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 PFKFB2O60825 505 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 GMPSP49915 693 aaPredicted RBP14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 PRR16Q569H4 304 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 KCTD17Q8N5Z5 321 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 FTOQ9C0B1 505 aaKnown RBP eCLIP14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 POLR3EQ9NVU0 708 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 SLC12A6Q9UHW9 1150 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 GOLGA8CPA6NN73 597 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 PFDN6O15212 129 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms