RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 ST8SIA5O15466 376 aa4.51□□□□□ -1.69
RBM39-201ENST00000253363 LMNB1P20700 586 aa4.51□□□□□ -1.69
RBM39-201ENST00000253363 LMNB2Q03252 620 aa4.51□□□□□ -1.69
RBM39-201ENST00000253363 NFIXQ14938 502 aa4.51□□□□□ -1.69
RBM39-201ENST00000253363 CCDC93Q567U6 631 aa4.51□□□□□ -1.69
RBM39-201ENST00000253363 RUFY4Q6ZNE9 571 aa4.51□□□□□ -1.69
RBM39-201ENST00000253363 LILRB2Q8N423 598 aa4.51□□□□□ -1.69
RBM39-201ENST00000253363 SH3TC2Q8TF17 1288 aa4.51□□□□□ -1.69
RBM39-201ENST00000253363 DNAJC7Q99615 494 aa4.51□□□□□ -1.69
RBM39-201ENST00000253363 BHLHE41Q9C0J9 482 aaPredicted RBP4.51□□□□□ -1.69
RBM39-201ENST00000253363 NUCKS1Q9H1E3 243 aaKnown RBP4.51□□□□□ -1.69
RBM39-201ENST00000253363 MARK1Q9P0L2 795 aa4.51□□□□□ -1.69
RBM39-201ENST00000253363 PRKAG3Q9UGI9 489 aa4.51□□□□□ -1.69
RBM39-201ENST00000253363 DACH1Q9UI36 760 aa4.51□□□□□ -1.69
RBM39-201ENST00000253363 RTL9Q8NET4 1388 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 hCG_2014768A0A024R1R8 64 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 FAM221AA4D161 298 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 CHL1O00533 1208 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 HOXA10P31260 410 aaPredicted RBP4.5□□□□□ -1.69
RBM39-201ENST00000253363 CDK8P49336 464 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 RIPK4P57078 832 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 DDR1Q08345 913 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 MSL1Q68DK7 614 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 WDR63Q8IWG1 891 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 NKD1Q969G9 470 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 CRAMP1Q96RY5 1269 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 METTL14Q9HCE5 456 aaKnown RBP4.5□□□□□ -1.69
RBM39-201ENST00000253363 C11orf16Q9NQ32 467 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 DDX21Q9NR30 783 aaKnown RBP eCLIP4.5□□□□□ -1.69
RBM39-201ENST00000253363 NDFIP2Q9NV92 336 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 DBF4Q9UBU7 674 aaPredicted RBP4.5□□□□□ -1.69
RBM39-201ENST00000253363 ANKRD31Q8N7Z5 1873 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 DICER1Q9UPY3 1922 aaKnown RBP4.5□□□□□ -1.69
RBM39-201ENST00000253363 IQCA1LA6NCM1 817 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 PDE2AO00408 941 aaPredicted RBP4.5□□□□□ -1.69
RBM39-201ENST00000253363 NPHP1O15259 732 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 CT47B1P0C2W7 299 aaPredicted RBP4.5□□□□□ -1.69
RBM39-201ENST00000253363 HYAL2Q12891 473 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 TRIM28Q13263 835 aaKnown RBP4.5□□□□□ -1.69
RBM39-201ENST00000253363 MYBPC2Q14324 1141 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.5□□□□□ -1.693e-10■□□□□ 11
RBM39-201ENST00000253363 GLIPR1L2Q4G1C9 344 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 NBPF5PQ86XG9 351 aaPredicted RBP4.5□□□□□ -1.69
RBM39-201ENST00000253363 C2CD5Q86YS7 1000 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 SLITRK4Q8IW52 837 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 NLGN2Q8NFZ4 835 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 GTPBP3Q969Y2 492 aaKnown RBP4.5□□□□□ -1.69
RBM39-201ENST00000253363 RBM17Q96I25 401 aaKnown RBP4.5□□□□□ -1.69
RBM39-201ENST00000253363 PHACTR3Q96KR7 559 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 ANTXR1Q9H6X2 564 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 BRMS1Q9HCU9 246 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 FANCLQ9NW38 375 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 CHPF2Q9P2E5 772 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 NAGPAQ9UK23 515 aa4.5□□□□□ -1.69
RBM39-201ENST00000253363 B2RBV5 119 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 ZNF853P0CG23 659 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 DPEP1P16444 411 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 EIF2AK2P19525 551 aaKnown RBP4.49□□□□□ -1.69
RBM39-201ENST00000253363 HSD3B2P26439 372 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 CDC25BP30305 580 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 CLCQ05315 142 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 PTPROQ16827 1216 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 CRY2Q49AN0 593 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 SLC10A5Q5PT55 438 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 CCDC181Q5TID7 509 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 FIGNL1Q6PIW4 674 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 REC114Q7Z4M0 266 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 GATAD2BQ8WXI9 593 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 FERD3LQ96RJ6 166 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 CEP44Q9C0F1 390 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 MAF1Q9H063 256 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 MAGEC2Q9UBF1 373 aaPredicted RBP4.49□□□□□ -1.69
RBM39-201ENST00000253363 SCN4AP35499 1836 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 FER1L6Q2WGJ9 1857 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 RLBP1P12271 317 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 YBX3P16989 372 aaKnown RBP eCLIP4.49□□□□□ -1.69
RBM39-201ENST00000253363 BMP6P22004 513 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 IGBP1P78318 339 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 SLC39A6Q13433 755 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 DDR2Q16832 855 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 ZNF423Q2M1K9 1284 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 CCDC30Q5VVM6 783 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 LARP1BQ659C4 914 aaKnown RBP4.49□□□□□ -1.69
RBM39-201ENST00000253363 CEP135Q66GS9 1140 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 PRR5LQ6MZQ0 368 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 TSHZ1Q6ZSZ6 1077 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 C16orf71Q8IYS4 520 aaPredicted RBP4.49□□□□□ -1.69
RBM39-201ENST00000253363 TMEM102Q8N9M5 508 aaPredicted RBP4.49□□□□□ -1.69
RBM39-201ENST00000253363 PLBD2Q8NHP8 589 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 GAL3ST3Q96A11 431 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 PBX4Q9BYU1 374 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 PDGFDQ9GZP0 370 aaPredicted RBP4.49□□□□□ -1.69
RBM39-201ENST00000253363 LACRTQ9GZZ8 138 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 MIR1-1HGQ9H1L0 117 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 TMEM39AQ9NV64 488 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 MAPK8IP1Q9UQF2 711 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 HDAC5Q9UQL6 1122 aa4.49□□□□□ -1.69
RBM39-201ENST00000253363 ESYT3A0FGR9 886 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 AVPP01185 164 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 PCBP4P57723 403 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms