RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 CYB5R4Q7L1T6 521 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 MDM1Q8TC05 714 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 TRIM47Q96LD4 638 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 SPAG5Q96R06 1193 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 PACSIN2Q9UNF0 486 aaPredicted RBP20.31■□□□□ 0.84
PTPN12-201ENST00000248594 IFIT3O14879 490 aaKnown RBP20.31■□□□□ 0.84
PTPN12-201ENST00000248594 RTN2O75298 545 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 PTPREP23469 700 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 PBX1P40424 430 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 ZBTB3Q9H5J0 574 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 MAGEC2Q9UBF1 373 aaPredicted RBP20.31■□□□□ 0.84
PTPN12-201ENST00000248594 LEMD3Q9Y2U8 911 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 TMCO5BA8MYB1 307 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 RANBP6O60518 1105 aaKnown RBP20.31■□□□□ 0.84
PTPN12-201ENST00000248594 PAK1Q13153 545 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 CHRNA2Q15822 529 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 CCDC50Q8IVM0 306 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 CCDC63Q8NA47 563 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 PUS7LQ9H0K6 701 aaKnown RBP20.31■□□□□ 0.84
PTPN12-201ENST00000248594 ATP6V0A4Q9HBG4 840 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 ETAA1Q9NY74 926 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 SLC12A7Q9Y666 1083 aa20.31■□□□□ 0.84
PTPN12-201ENST00000248594 HAUS3Q68CZ6 603 aa20.3■□□□□ 0.84
PTPN12-201ENST00000248594 KANK3Q6NY19 840 aa20.3■□□□□ 0.84
PTPN12-201ENST00000248594 ORAI2Q96SN7 254 aa20.3■□□□□ 0.84
PTPN12-201ENST00000248594 CCDC113Q9H0I3 377 aa20.3■□□□□ 0.84
PTPN12-201ENST00000248594 NOVA2Q9UNW9 492 aaKnown RBP20.3■□□□□ 0.84
PTPN12-201ENST00000248594 TLDC2A0PJX2 215 aa20.3■□□□□ 0.84
PTPN12-201ENST00000248594 PPP1R3GB7ZBB8 358 aa20.3■□□□□ 0.84
PTPN12-201ENST00000248594 SARSP49591 514 aaKnown RBP20.3■□□□□ 0.84
PTPN12-201ENST00000248594 GCKRQ14397 625 aa20.3■□□□□ 0.84
PTPN12-201ENST00000248594 TCP11X2Q5H9J9 407 aa20.3■□□□□ 0.84
PTPN12-201ENST00000248594 EMBQ6PCB8 327 aa20.3■□□□□ 0.84
PTPN12-201ENST00000248594 APOA5Q6Q788 366 aa20.3■□□□□ 0.84
PTPN12-201ENST00000248594 TAX1BP1Q86VP1 789 aa20.3■□□□□ 0.84
PTPN12-201ENST00000248594 CREG2Q8IUH2 290 aa20.3■□□□□ 0.84
PTPN12-201ENST00000248594 ATP6V1G3Q96LB4 118 aa20.3■□□□□ 0.84
PTPN12-201ENST00000248594 KDM7AQ6ZMT4 941 aa20.3■□□□□ 0.84
PTPN12-201ENST00000248594 DDX42Q86XP3 938 aaKnown RBP eCLIP20.3■□□□□ 0.844e-9■□□□□ 8.5
PTPN12-201ENST00000248594 CCDC170Q8IYT3 715 aa20.3■□□□□ 0.84
PTPN12-201ENST00000248594 ACTR5Q9H9F9 607 aaPredicted RBP20.3■□□□□ 0.84
PTPN12-201ENST00000248594 ABCC6O95255 1503 aa20.29■□□□□ 0.84
PTPN12-201ENST00000248594 USO1O60763 962 aaKnown RBP20.29■□□□□ 0.84
PTPN12-201ENST00000248594 ATP6V1G2O95670 118 aa20.29■□□□□ 0.84
PTPN12-201ENST00000248594 CUL4BQ13620 913 aa20.29■□□□□ 0.84
PTPN12-201ENST00000248594 CHADLQ6NUI6 762 aa20.29■□□□□ 0.84
PTPN12-201ENST00000248594 MB21D2Q8IYB1 491 aaPredicted RBP20.29■□□□□ 0.84
PTPN12-201ENST00000248594 PRCCQ92733 491 aaPredicted RBP20.29■□□□□ 0.84
PTPN12-201ENST00000248594 OSBPL9Q96SU4 736 aa20.29■□□□□ 0.84
PTPN12-201ENST00000248594 SELENOSQ9BQE4 189 aa20.29■□□□□ 0.84
PTPN12-201ENST00000248594 IFIH1Q9BYX4 1025 aaKnown RBP20.29■□□□□ 0.84
PTPN12-201ENST00000248594 SNX12Q9UMY4 172 aa20.29■□□□□ 0.84
PTPN12-201ENST00000248594 GCOM1H8Y6P7 765 aaPredicted RBP20.29■□□□□ 0.84
PTPN12-201ENST00000248594 MYZAPP0CAP1 466 aa20.29■□□□□ 0.84
PTPN12-201ENST00000248594 NBPF20Q3BBV1 942 aa20.29■□□□□ 0.84
PTPN12-201ENST00000248594 CDKAL1Q5VV42 579 aa20.29■□□□□ 0.84
PTPN12-201ENST00000248594 IFT20Q8IY31 132 aa20.29■□□□□ 0.84
PTPN12-201ENST00000248594 TRIML1Q8N9V2 468 aa20.29■□□□□ 0.84
PTPN12-201ENST00000248594 UBN2Q6ZU65 1347 aa20.29■□□□□ 0.84
PTPN12-201ENST00000248594 SH3TC1Q8TE82 1336 aa20.29■□□□□ 0.84
PTPN12-201ENST00000248594 NEURL1BA8MQ27 555 aa20.28■□□□□ 0.84
PTPN12-201ENST00000248594 PRDM1O75626 825 aa20.28■□□□□ 0.84
PTPN12-201ENST00000248594 PARP1P09874 1014 aaKnown RBP20.28■□□□□ 0.84
PTPN12-201ENST00000248594 LRRC24Q50LG9 513 aa20.28■□□□□ 0.84
PTPN12-201ENST00000248594 NUP58Q9BVL2 599 aa20.28■□□□□ 0.84
PTPN12-201ENST00000248594 IDH1O75874 414 aaKnown RBP20.28■□□□□ 0.84
PTPN12-201ENST00000248594 GKAP1Q5VSY0 366 aaPredicted RBP20.28■□□□□ 0.84
PTPN12-201ENST00000248594 C2CD5Q86YS7 1000 aa20.28■□□□□ 0.84
PTPN12-201ENST00000248594 TRIM22Q8IYM9 498 aa20.28■□□□□ 0.84
PTPN12-201ENST00000248594 TRIM31Q9BZY9 425 aa20.28■□□□□ 0.84
PTPN12-201ENST00000248594 SLC39A2Q9NP94 309 aa20.28■□□□□ 0.84
PTPN12-201ENST00000248594 TRPC6Q9Y210 931 aa20.28■□□□□ 0.84
PTPN12-201ENST00000248594 BZW1Q7L1Q6 419 aaKnown RBP20.28■□□□□ 0.84
PTPN12-201ENST00000248594 CUL5Q93034 780 aa20.28■□□□□ 0.84
PTPN12-201ENST00000248594 AXIN2Q9Y2T1 843 aa20.28■□□□□ 0.84
PTPN12-201ENST00000248594 PALLDQ8WX93 1383 aa20.28■□□□□ 0.84
PTPN12-201ENST00000248594 PLEKHG1Q9ULL1 1385 aa20.28■□□□□ 0.84
PTPN12-201ENST00000248594 KDM4FA0A1W2PPD8 638 aa20.27■□□□□ 0.84
PTPN12-201ENST00000248594 FTCDO95954 541 aa20.27■□□□□ 0.84
PTPN12-201ENST00000248594 CTNNA1P35221 906 aaKnown RBP20.27■□□□□ 0.84
PTPN12-201ENST00000248594 CCDC178Q5BJE1 867 aa20.27■□□□□ 0.84
PTPN12-201ENST00000248594 KIF2BQ8N4N8 673 aa20.27■□□□□ 0.84
PTPN12-201ENST00000248594 FAM207AQ9NSI2 230 aaPredicted RBP20.27■□□□□ 0.84
PTPN12-201ENST00000248594 CD2APQ9Y5K6 639 aa20.27■□□□□ 0.84
PTPN12-201ENST00000248594 OVOS2A0A0J9YW53 1432 aa20.27■□□□□ 0.84
PTPN12-201ENST00000248594 OVOS2Q6IE36 1432 aa20.27■□□□□ 0.84
PTPN12-201ENST00000248594 MTIF2P46199 727 aaKnown RBP20.27■□□□□ 0.84
PTPN12-201ENST00000248594 IFNAR2P48551 515 aa20.27■□□□□ 0.84
PTPN12-201ENST00000248594 GRIK3Q13003 919 aa20.27■□□□□ 0.84
PTPN12-201ENST00000248594 WDR59Q6PJI9 974 aa20.27■□□□□ 0.84
PTPN12-201ENST00000248594 UHMK1Q8TAS1 419 aaKnown RBP20.27■□□□□ 0.84
PTPN12-201ENST00000248594 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.27■□□□□ 0.84
PTPN12-201ENST00000248594 RNMTO43148 476 aaKnown RBP20.27■□□□□ 0.83
PTPN12-201ENST00000248594 GPAA1O43292 621 aa20.27■□□□□ 0.83
PTPN12-201ENST00000248594 PAK2Q13177 524 aa20.27■□□□□ 0.83
PTPN12-201ENST00000248594 TDRD12Q587J7 1177 aaKnown RBP20.27■□□□□ 0.83
PTPN12-201ENST00000248594 CCDC26Q8TAB7 109 aa20.27■□□□□ 0.83
PTPN12-201ENST00000248594 SNUPNO95149 360 aaKnown RBP20.26■□□□□ 0.83
PTPN12-201ENST00000248594 ELF3P78545 371 aaPredicted RBP20.26■□□□□ 0.83
PTPN12-201ENST00000248594 ARID5AQ03989 594 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms