RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ESYT2A0FGR8 921 aa24.74■■□□□ 1.55
RNF39-201ENST00000244360 SRGNP10124 158 aa24.74■■□□□ 1.55
RNF39-201ENST00000244360 KARSQ15046 597 aaKnown RBP24.74■■□□□ 1.55
RNF39-201ENST00000244360 CERS5Q8N5B7 392 aa24.74■■□□□ 1.55
RNF39-201ENST00000244360 BAG1Q99933 345 aaPredicted RBP24.74■■□□□ 1.55
RNF39-201ENST00000244360 RIOX1Q9H6W3 641 aa24.74■■□□□ 1.55
RNF39-201ENST00000244360 CTNND2Q9UQB3 1225 aa24.74■■□□□ 1.55
RNF39-201ENST00000244360 IGKV6D-41A0A0C4DH26 115 aa24.73■■□□□ 1.55
RNF39-201ENST00000244360 RPN1P04843 607 aaKnown RBP24.73■■□□□ 1.55
RNF39-201ENST00000244360 TPM1P09493 284 aa24.73■■□□□ 1.55
RNF39-201ENST00000244360 C6orf50Q9HD87 102 aa24.73■■□□□ 1.55
RNF39-201ENST00000244360 MTMR4Q9NYA4 1195 aa24.73■■□□□ 1.55
RNF39-201ENST00000244360 GNA11P29992 359 aa24.73■■□□□ 1.55
RNF39-201ENST00000244360 ERCC6LQ2NKX8 1250 aa24.73■■□□□ 1.55
RNF39-201ENST00000244360 PPP2R2CQ9Y2T4 447 aa24.73■■□□□ 1.55
RNF39-201ENST00000244360 hCG_1984214I3L0E3 225 aa24.72■■□□□ 1.55
RNF39-201ENST00000244360 RIMBP2O15034 1052 aa24.72■■□□□ 1.55
RNF39-201ENST00000244360 MYL1P05976 194 aa24.72■■□□□ 1.55
RNF39-201ENST00000244360 NPR1P16066 1061 aa24.72■■□□□ 1.55
RNF39-201ENST00000244360 CDC25AP30304 524 aa24.72■■□□□ 1.55
RNF39-201ENST00000244360 NONOQ15233 471 aaKnown RBP eCLIP24.72■■□□□ 1.55
RNF39-201ENST00000244360 RRAGBQ5VZM2 374 aa24.72■■□□□ 1.55
RNF39-201ENST00000244360 ZNF713Q8N859 430 aaPredicted RBP24.72■■□□□ 1.55
RNF39-201ENST00000244360 ARGLU1Q9NWB6 273 aaPredicted RBP24.72■■□□□ 1.55
RNF39-201ENST00000244360 SEC63Q9UGP8 760 aaKnown RBP24.72■■□□□ 1.55
RNF39-201ENST00000244360 MYO3BQ8WXR4 1341 aa24.72■■□□□ 1.55
RNF39-201ENST00000244360 SMCO2A6NFE2 343 aa24.71■■□□□ 1.55
RNF39-201ENST00000244360 USP17L5A8MUK1 530 aa24.71■■□□□ 1.55
RNF39-201ENST00000244360 TEX33O43247 280 aa24.71■■□□□ 1.55
RNF39-201ENST00000244360 PDHBP11177 359 aa24.71■■□□□ 1.55
RNF39-201ENST00000244360 FAM193AP78312 1265 aa24.71■■□□□ 1.55
RNF39-201ENST00000244360 SEMA3FQ13275 785 aa24.71■■□□□ 1.55
RNF39-201ENST00000244360 ORC2Q13416 577 aaPredicted RBP24.71■■□□□ 1.55
RNF39-201ENST00000244360 BMS1Q14692 1282 aaKnown RBP24.71■■□□□ 1.55
RNF39-201ENST00000244360 NLGN1Q8N2Q7 840 aa24.71■■□□□ 1.55
RNF39-201ENST00000244360 SNHG28P0DPA3 235 aa24.71■■□□□ 1.55
RNF39-201ENST00000244360 PAK1Q13153 545 aa24.71■■□□□ 1.55
RNF39-201ENST00000244360 MNS1Q8NEH6 495 aa24.71■■□□□ 1.55
RNF39-201ENST00000244360 AK8Q96MA6 479 aa24.71■■□□□ 1.55
RNF39-201ENST00000244360 PANX2Q96RD6 677 aa24.71■■□□□ 1.55
RNF39-201ENST00000244360 LIMA1Q9UHB6 759 aaKnown RBP24.71■■□□□ 1.55
RNF39-201ENST00000244360 LRRC10BA6NIK2 292 aa24.7■■□□□ 1.55
RNF39-201ENST00000244360 UBXN4Q92575 508 aa24.7■■□□□ 1.55
RNF39-201ENST00000244360 PIGSQ96S52 555 aa24.7■■□□□ 1.55
RNF39-201ENST00000244360 DDX4Q9NQI0 724 aaKnown RBP24.7■■□□□ 1.55
RNF39-201ENST00000244360 PP2D1A8MPX8 630 aa24.7■■□□□ 1.54
RNF39-201ENST00000244360 UBA7P41226 1012 aa24.7■■□□□ 1.54
RNF39-201ENST00000244360 ADKP55263 362 aaKnown RBP24.7■■□□□ 1.54
RNF39-201ENST00000244360 KCNB1Q14721 858 aa24.7■■□□□ 1.54
RNF39-201ENST00000244360 ASPRV1Q53RT3 343 aa24.7■■□□□ 1.54
RNF39-201ENST00000244360 ZC3H12CQ9C0D7 883 aaKnown RBP24.7■■□□□ 1.54
RNF39-201ENST00000244360 KBTBD4Q9NVX7 518 aa24.7■■□□□ 1.54
RNF39-201ENST00000244360 EFCAB8A8MWE9 144 aa24.69■■□□□ 1.54
RNF39-201ENST00000244360 OR52Z1P0C646 297 aa24.69■■□□□ 1.54
RNF39-201ENST00000244360 CUEDC2Q9H467 287 aa24.69■■□□□ 1.54
RNF39-201ENST00000244360 MAGEF1Q9HAY2 307 aa24.69■■□□□ 1.54
RNF39-201ENST00000244360 SWAP70Q9UH65 585 aa24.69■■□□□ 1.54
RNF39-201ENST00000244360 ZHX1Q9UKY1 873 aaPredicted RBP24.69■■□□□ 1.54
RNF39-201ENST00000244360 ITIH6Q6UXX5 1313 aa24.69■■□□□ 1.54
RNF39-201ENST00000244360 AKR1B1P15121 316 aa24.69■■□□□ 1.54
RNF39-201ENST00000244360 SPAG1Q07617 926 aa24.69■■□□□ 1.54
RNF39-201ENST00000244360 PICALMQ13492 652 aa24.69■■□□□ 1.54
RNF39-201ENST00000244360 FILIP1LQ4L180 1135 aa24.69■■□□□ 1.54
RNF39-201ENST00000244360 ARHGAP29Q52LW3 1261 aa24.69■■□□□ 1.54
RNF39-201ENST00000244360 SOGA3Q5TF21 947 aa24.69■■□□□ 1.54
RNF39-201ENST00000244360 NEK8Q86SG6 692 aa24.69■■□□□ 1.54
RNF39-201ENST00000244360 AKT1S1Q96B36 256 aa24.69■■□□□ 1.54
RNF39-201ENST00000244360 TTF2Q9UNY4 1162 aaKnown RBP24.69■■□□□ 1.54
RNF39-201ENST00000244360 COL11A2P13942 1736 aaPredicted RBP24.68■■□□□ 1.54
RNF39-201ENST00000244360 AKR1B15C9JRZ8 316 aaPredicted RBP24.68■■□□□ 1.54
RNF39-201ENST00000244360 CREBRFQ8IUR6 639 aa24.68■■□□□ 1.54
RNF39-201ENST00000244360 NELFBQ8WX92 580 aa24.68■■□□□ 1.54
RNF39-201ENST00000244360 URI1O94763 535 aaPredicted RBP24.67■■□□□ 1.54
RNF39-201ENST00000244360 HHIPL2Q6UWX4 724 aa24.67■■□□□ 1.54
RNF39-201ENST00000244360 PARP3Q9Y6F1 533 aa24.67■■□□□ 1.54
RNF39-201ENST00000244360 KLRC4O43908 158 aa24.67■■□□□ 1.54
RNF39-201ENST00000244360 ALDH1B1P30837 517 aa24.67■■□□□ 1.54
RNF39-201ENST00000244360 KRT31Q15323 416 aa24.67■■□□□ 1.54
RNF39-201ENST00000244360 COL23A1Q86Y22 540 aaPredicted RBP24.67■■□□□ 1.54
RNF39-201ENST00000244360 ADSSL1Q8N142 457 aa24.67■■□□□ 1.54
RNF39-201ENST00000244360 IGSF22Q8N9C0 903 aa24.67■■□□□ 1.54
RNF39-201ENST00000244360 GDAQ9Y2T3 454 aa24.67■■□□□ 1.54
RNF39-201ENST00000244360 LETM2Q2VYF4 491 aa24.66■■□□□ 1.54
RNF39-201ENST00000244360 DPP8Q6V1X1 898 aaPredicted RBP24.66■■□□□ 1.54
RNF39-201ENST00000244360 REXO1Q8N1G1 1221 aaKnown RBP24.66■■□□□ 1.54
RNF39-201ENST00000244360 UBA5Q9GZZ9 404 aa24.66■■□□□ 1.54
RNF39-201ENST00000244360 ZNF446Q9NWS9 450 aa24.66■■□□□ 1.54
RNF39-201ENST00000244360 SERPINB13Q9UIV8 391 aa24.66■■□□□ 1.54
RNF39-201ENST00000244360 GREB1LQ9C091 1923 aaPredicted RBP24.66■■□□□ 1.54
RNF39-201ENST00000244360 F8W031 263 aaPredicted RBP24.66■■□□□ 1.54
RNF39-201ENST00000244360 CCNT1O60563 726 aaKnown RBP24.66■■□□□ 1.54
RNF39-201ENST00000244360 TADA3O75528 432 aa24.66■■□□□ 1.54
RNF39-201ENST00000244360 CASQ1P31415 396 aa24.66■■□□□ 1.54
RNF39-201ENST00000244360 PRCPP42785 496 aa24.66■■□□□ 1.54
RNF39-201ENST00000244360 CLCN6P51797 869 aa24.66■■□□□ 1.54
RNF39-201ENST00000244360 LRRN4CLQ8ND94 238 aa24.66■■□□□ 1.54
RNF39-201ENST00000244360 LRRC15Q8TF66 581 aa24.66■■□□□ 1.54
RNF39-201ENST00000244360 VAT1LQ9HCJ6 419 aa24.66■■□□□ 1.54
RNF39-201ENST00000244360 USP40Q9NVE5 1235 aa24.66■■□□□ 1.54
RNF39-201ENST00000244360 MYH8P13535 1937 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms