RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 SLC27A3Q5K4L6 730 aa12.18□□□□□ -0.46
COPA-201ENST00000241704 CIAPIN1Q6FI81 312 aa12.18□□□□□ -0.46
COPA-201ENST00000241704 REXO1Q8N1G1 1221 aaKnown RBP12.18□□□□□ -0.46
COPA-201ENST00000241704 TTC14Q96N46 770 aa12.18□□□□□ -0.46
COPA-201ENST00000241704 STRBPQ96SI9 672 aaKnown RBP12.18□□□□□ -0.46
COPA-201ENST00000241704 PLA2G12BQ9BX93 195 aa12.18□□□□□ -0.46
COPA-201ENST00000241704 TXKP42681 527 aa12.18□□□□□ -0.46
COPA-201ENST00000241704 BIRC2Q13490 618 aa12.18□□□□□ -0.46
COPA-201ENST00000241704 CYLC1P35663 651 aaPredicted RBP12.18□□□□□ -0.46
COPA-201ENST00000241704 ARHGEF6Q15052 776 aa12.18□□□□□ -0.46
COPA-201ENST00000241704 ANKRD62A6NC57 917 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 BTBD18B2RXH4 712 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 SCG2P13521 617 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 SPON1Q9HCB6 807 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 SPATA31A1Q5TZJ5 1347 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 SMCO2A6NFE2 343 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 KLRF2D3W0D1 207 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 PAFAH1B1P43034 410 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 PDIA6Q15084 440 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 PAIP2Q9BPZ3 127 aaKnown RBP12.17□□□□□ -0.46
COPA-201ENST00000241704 AZI2Q9H6S1 392 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 MINPP1Q9UNW1 487 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 DKC1O60832 514 aaKnown RBP eCLIP12.17□□□□□ -0.46
COPA-201ENST00000241704 ICA1Q05084 483 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 VPS72Q15906 364 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 BLIDQ8IZY5 108 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 ALS2CR12Q96Q35 445 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 FUT8Q9BYC5 575 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 SYNCQ9H7C4 482 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 LRWD1Q9UFC0 647 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 A0A087WWV3 80 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 ZKSCAN8Q15776 578 aaPredicted RBP12.17□□□□□ -0.46
COPA-201ENST00000241704 ARMCX5Q6P1M9 558 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 CCDC65Q8IXS2 484 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 CSRNP1Q96S65 589 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 DESI2Q9BSY9 194 aa12.17□□□□□ -0.46
COPA-201ENST00000241704 RNF26Q9BY78 433 aaPredicted RBP12.17□□□□□ -0.46
COPA-201ENST00000241704 TRIM6Q9C030 488 aaPredicted RBP12.17□□□□□ -0.46
COPA-201ENST00000241704 ABT1Q9ULW3 272 aaKnown RBP12.17□□□□□ -0.46
COPA-201ENST00000241704 USP42Q9H9J4 1324 aaKnown RBP12.16□□□□□ -0.46
COPA-201ENST00000241704 TMCO5BA8MYB1 307 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 ATP2C2O75185 946 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 CMA1P23946 247 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 CCT6AP40227 531 aaKnown RBP12.16□□□□□ -0.46
COPA-201ENST00000241704 LIFRP42702 1097 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 HAUS3Q68CZ6 603 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 SPECC1LQ69YQ0 1117 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 ATG9AQ7Z3C6 839 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 ARHGEF1Q92888 912 aaKnown RBP12.16□□□□□ -0.46
COPA-201ENST00000241704 ZSWIM5Q9P217 1185 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 MRFAP1Q9Y605 127 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 SH2B2O14492 632 aaPredicted RBP12.16□□□□□ -0.46
COPA-201ENST00000241704 CHRM1P11229 460 aaPredicted RBP12.16□□□□□ -0.46
COPA-201ENST00000241704 CTNNA2P26232 953 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 POSTNQ15063 836 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 TAF12Q16514 161 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 TBC1D9BQ66K14 1250 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 GALNT17Q6IS24 598 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 TMED8Q6PL24 325 aaPredicted RBP12.16□□□□□ -0.46
COPA-201ENST00000241704 APBB1IPQ7Z5R6 666 aaPredicted RBP12.16□□□□□ -0.46
COPA-201ENST00000241704 JADE2Q9NQC1 790 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 SNAP23O00161 211 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 SEPT7Q16181 437 aaKnown RBP12.16□□□□□ -0.46
COPA-201ENST00000241704 PGBD1Q96JS3 809 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 CARMIL3Q8ND23 1372 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 FER1L4A9Z1Z3 1794 aa12.16□□□□□ -0.46
COPA-201ENST00000241704 ALAS1P13196 640 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 PFKFB1P16118 471 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 MMP14P50281 582 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 UBXN1Q04323 297 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 PDE4DQ08499 809 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 RBBP5Q15291 538 aaKnown RBP12.15□□□□□ -0.46
COPA-201ENST00000241704 SNCBQ16143 134 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 DPCR1Q3MIW9 517 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 DHX40Q8IX18 779 aaKnown RBP12.15□□□□□ -0.46
COPA-201ENST00000241704 NAA15Q9BXJ9 866 aaKnown RBP12.15□□□□□ -0.46
COPA-201ENST00000241704 PCDHA7Q9UN72 937 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 ABCC12Q96J65 1359 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 SLC8A1P32418 973 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 DNA2P51530 1060 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 ADKP55263 362 aaKnown RBP12.15□□□□□ -0.46
COPA-201ENST00000241704 MECOMQ03112 1051 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 CCDC17Q96LX7 622 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 SLC24A3Q9HC58 644 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 RTEL1Q9NZ71 1219 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.15□□□□□ -0.46
COPA-201ENST00000241704 RIPOR2Q9Y4F9 1068 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 GOLGA8KD6RF30 607 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 KIF3CO14782 793 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 PPP1R12AO14974 1030 aaPredicted RBP12.15□□□□□ -0.46
COPA-201ENST00000241704 FLOT1O75955 427 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 CNGA1P29973 690 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 CNGA4Q8IV77 575 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 CAPZA3Q96KX2 299 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 MST1RQ04912 1400 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 IKBKBO14920 756 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 HARSP12081 509 aaKnown RBP12.15□□□□□ -0.46
COPA-201ENST00000241704 IFNAR1P17181 557 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 HNRNPH1P31943 449 aaKnown RBP12.15□□□□□ -0.46
COPA-201ENST00000241704 SWT1Q5T5J6 900 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms