RNA–Protein interactions for RNA: ENST00000228425.10

PPFIBP1-201, Transcript of PPFIA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIBP1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-201ENST00000228425 MCM7P33993 719 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 MRPS35P82673 323 aaKnown RBP6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 WASHC5Q12768 1159 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 RRAGBQ5VZM2 374 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 LRRC43Q8N309 656 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 PPHLN1Q8NEY8 458 aaKnown RBP6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 RSRC1Q96IZ7 334 aaKnown RBP6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 NEUROG2Q9H2A3 272 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 GTF2A1LQ9UNN4 478 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 FNDC3AQ9Y2H6 1198 aaKnown RBP6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 TTLL3Q9Y4R7 772 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 SNX5Q9Y5X3 404 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 RANBP2P49792 3224 aaKnown RBP6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 ATP5J2-PTCD1G3V325 749 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 NOP56O00567 594 aaKnown RBP6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 PTCD1O75127 700 aaKnown RBP6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 ZSCAN22P10073 491 aaPredicted RBP6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 GUCY1B3Q02153 619 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 FAPQ12884 760 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 ALFQ53S48 1182 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 LIN9Q5TKA1 542 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 RMDN2Q96LZ7 410 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 HINFPQ9BQA5 517 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 CUEDC1Q9NWM3 386 aaPredicted RBP6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 PARP3Q9Y6F1 533 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 GJA3Q9Y6H8 435 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 WNK3Q9BYP7 1800 aa6.56□□□□□ -1.36
PPFIBP1-201ENST00000228425 N4BP3O15049 544 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 CHGBP05060 677 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 PRPF40BQ6NWY9 871 aaKnown RBP6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 TMC6Q7Z403 805 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 NEK1Q96PY6 1258 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 MYD88Q99836 296 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 MAF1Q9H063 256 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 ZC4H2Q9NQZ6 224 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 CPSF2Q9P2I0 782 aaKnown RBP6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 NFKBIL1Q9UBC1 381 aaPredicted RBP6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 TMEM94Q12767 1356 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 MAP3K7O43318 606 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 SORBS3O60504 671 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 GBP1P32455 592 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 KRT83P78385 493 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 PHEXP78562 749 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 STRN3Q13033 797 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 TMED1Q13445 227 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 LRCH2Q5VUJ6 765 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 ARMC3Q5W041 872 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 MFSD6Q6ZSS7 791 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 CPLX4Q7Z7G2 160 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 C10orf67Q8IYJ2 551 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 MICALL1Q8N3F8 863 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 SDCCAG3Q96C92 435 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 C16orf45Q96MC5 204 aaPredicted RBP6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 TRERF1Q96PN7 1200 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 SH2D4AQ9H788 454 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 SLC5A4Q9NY91 659 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 MIS18AQ9NYP9 233 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 DNAJC21Q5F1R6 531 aaKnown RBP6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 MPRIPQ6WCQ1 1025 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 HEATR3Q7Z4Q2 680 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 CEP57Q86XR8 500 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 ENOX1Q8TC92 643 aaKnown RBP6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 MTMR8Q96EF0 704 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 NUDT16L1Q9BRJ7 211 aaKnown RBP6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 EIF2AQ9BY44 585 aaKnown RBP6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 KIF9Q9HAQ2 790 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 RTEL1Q9NZ71 1219 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 RAD50Q92878 1312 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 AATKQ6ZMQ8 1374 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 IARSP41252 1262 aaKnown RBP6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 TTC39BQ5VTQ0 682 aaPredicted RBP6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 FLAD1Q8NFF5 587 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 CTAGE1Q96RT6 745 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 ANTXR1Q9H6X2 564 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 IBTKQ9P2D0 1353 aaPredicted RBP6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 OAS2P29728 719 aaKnown RBP6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 BLVRAP53004 296 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 COG7P83436 770 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 PUM3Q15397 648 aaKnown RBP6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 LGSNQ5TDP6 509 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 JADE1Q6IE81 842 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 CCDC62Q6P9F0 684 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 ARHGAP24Q8N264 748 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 AFAP1L1Q8TED9 768 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 LEO1Q8WVC0 666 aaPredicted RBP6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 POMGNT1Q8WZA1 660 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 OGFRQ9NZT2 677 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 PARP2Q9UGN5 583 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 GINS2Q9Y248 185 aa6.55□□□□□ -1.36
PPFIBP1-201ENST00000228425 TYW5A2RUC4 315 aaKnown RBP6.54□□□□□ -1.36
PPFIBP1-201ENST00000228425 I3L4J1 428 aa6.54□□□□□ -1.36
PPFIBP1-201ENST00000228425 EFCAB14O75071 495 aa6.54□□□□□ -1.36
PPFIBP1-201ENST00000228425 KRT33BQ14525 404 aa6.54□□□□□ -1.36
PPFIBP1-201ENST00000228425 NOLC1Q14978 699 aaKnown RBP eCLIP6.54□□□□□ -1.36
PPFIBP1-201ENST00000228425 MIER3Q7Z3K6 550 aa6.54□□□□□ -1.36
PPFIBP1-201ENST00000228425 TTC30AQ86WT1 665 aa6.54□□□□□ -1.36
PPFIBP1-201ENST00000228425 DEPDC4Q8N2C3 294 aa6.54□□□□□ -1.36
PPFIBP1-201ENST00000228425 MED10Q9BTT4 135 aa6.54□□□□□ -1.36
PPFIBP1-201ENST00000228425 SLC13A4Q9UKG4 626 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms