RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 KIAA1328Q86T90 577 aa15.76■□□□□ 0.11
SF1-201ENST00000227503 PAGE5Q96GU1 130 aa15.76■□□□□ 0.11
SF1-201ENST00000227503 IDEP14735 1019 aa15.76■□□□□ 0.11
SF1-201ENST00000227503 COPB1P53618 953 aaKnown RBP15.76■□□□□ 0.11
SF1-201ENST00000227503 RCAN1P53805 252 aa15.76■□□□□ 0.11
SF1-201ENST00000227503 TUBB4BP68371 445 aa15.76■□□□□ 0.11
SF1-201ENST00000227503 SETQ01105 290 aaPredicted RBP15.76■□□□□ 0.11
SF1-201ENST00000227503 CEP57Q86XR8 500 aa15.76■□□□□ 0.11
SF1-201ENST00000227503 FANCBQ8NB91 859 aa15.76■□□□□ 0.11
SF1-201ENST00000227503 TRIM49BA6NDI0 452 aa15.75■□□□□ 0.11
SF1-201ENST00000227503 TUBBP07437 444 aa15.75■□□□□ 0.11
SF1-201ENST00000227503 PDHBP11177 359 aa15.75■□□□□ 0.11
SF1-201ENST00000227503 PAX7P23759 505 aa15.75■□□□□ 0.11
SF1-201ENST00000227503 RRAGBQ5VZM2 374 aa15.75■□□□□ 0.11
SF1-201ENST00000227503 MIGA1Q8NAN2 632 aa15.75■□□□□ 0.11
SF1-201ENST00000227503 AENQ8WTP8 325 aaKnown RBP15.75■□□□□ 0.11
SF1-201ENST00000227503 SHISA4Q96DD7 197 aa15.75■□□□□ 0.11
SF1-201ENST00000227503 SRPRBQ9Y5M8 271 aaKnown RBP15.75■□□□□ 0.11
SF1-201ENST00000227503 PSMD14O00487 310 aa15.75■□□□□ 0.11
SF1-201ENST00000227503 BACH1O14867 736 aa15.75■□□□□ 0.11
SF1-201ENST00000227503 EARS2Q5JPH6 523 aaKnown RBP15.75■□□□□ 0.11
SF1-201ENST00000227503 ZNF654Q8IZM8 581 aa15.75■□□□□ 0.11
SF1-201ENST00000227503 TMTC2Q8N394 836 aa15.75■□□□□ 0.11
SF1-201ENST00000227503 ATP2C2O75185 946 aa15.74■□□□□ 0.11
SF1-201ENST00000227503 KLK7P49862 253 aa15.74■□□□□ 0.11
SF1-201ENST00000227503 SYMPKQ92797 1274 aaKnown RBP15.74■□□□□ 0.11
SF1-201ENST00000227503 RNPC3Q96LT9 517 aaKnown RBP15.74■□□□□ 0.11
SF1-201ENST00000227503 SH3GL2Q99962 352 aa15.74■□□□□ 0.11
SF1-201ENST00000227503 MYO1AQ9UBC5 1043 aa15.74■□□□□ 0.11
SF1-201ENST00000227503 ESYT3A0FGR9 886 aa15.74■□□□□ 0.11
SF1-201ENST00000227503 ERICH2A1L162 156 aa15.74■□□□□ 0.11
SF1-201ENST00000227503 ZPR1O75312 459 aa15.74■□□□□ 0.11
SF1-201ENST00000227503 DNA2P51530 1060 aa15.74■□□□□ 0.11
SF1-201ENST00000227503 IFT88Q13099 833 aa15.74■□□□□ 0.11
SF1-201ENST00000227503 E2F5Q15329 346 aa15.74■□□□□ 0.11
SF1-201ENST00000227503 SPRED3Q2MJR0 410 aa15.74■□□□□ 0.11
SF1-201ENST00000227503 RPAINQ86UA6 219 aa15.74■□□□□ 0.11
SF1-201ENST00000227503 TRIML1Q8N9V2 468 aa15.74■□□□□ 0.11
SF1-201ENST00000227503 SPATA20Q8TB22 786 aa15.74■□□□□ 0.11
SF1-201ENST00000227503 FAM184BQ9ULE4 1060 aa15.74■□□□□ 0.11
SF1-201ENST00000227503 CCDC189A1A4V9 331 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 ZSCAN5CA6NGD5 496 aaPredicted RBP15.73■□□□□ 0.11
SF1-201ENST00000227503 MEFVO15553 781 aaPredicted RBP15.73■□□□□ 0.11
SF1-201ENST00000227503 RDXP35241 583 aaKnown RBP15.73■□□□□ 0.11
SF1-201ENST00000227503 HDLBPQ00341 1268 aaKnown RBP15.73■□□□□ 0.11
SF1-201ENST00000227503 SF3A3Q12874 501 aaKnown RBP eCLIP15.73■□□□□ 0.114e-7■■■□□ 14.8
SF1-201ENST00000227503 SEC23AQ15436 765 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 INTS5Q6P9B9 1019 aaKnown RBP15.73■□□□□ 0.11
SF1-201ENST00000227503 WDR59Q6PJI9 974 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 ADGRA1Q86SQ6 560 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 CTAGE1Q96RT6 745 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 RNF41Q9H4P4 317 aaPredicted RBP15.73■□□□□ 0.11
SF1-201ENST00000227503 KCNJ18B7U540 433 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 ELF1P32519 619 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 KCNJ12Q14500 433 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 KRT26Q7Z3Y9 468 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 NUP133Q8WUM0 1156 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 CCDC51Q96ER9 411 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 ZIM3Q96PE6 472 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 RUFY1Q96T51 708 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.73■□□□□ 0.11
SF1-201ENST00000227503 GDAQ9Y2T3 454 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 SKAP2O75563 359 aaPredicted RBP15.73■□□□□ 0.11
SF1-201ENST00000227503 FECHP22830 423 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 NAA35Q5VZE5 725 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 PAPD7Q5XG87 772 aaKnown RBP15.73■□□□□ 0.11
SF1-201ENST00000227503 AGPAT5Q9NUQ2 364 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 LRP2BPQ9P2M1 347 aa15.73■□□□□ 0.11
SF1-201ENST00000227503 TARSL2A2RTX5 802 aaKnown RBP15.72■□□□□ 0.11
SF1-201ENST00000227503 SMIM22K7EJ46 135 aa15.72■□□□□ 0.11
SF1-201ENST00000227503 MCM3P25205 808 aa15.72■□□□□ 0.11
SF1-201ENST00000227503 PLCH1Q4KWH8 1693 aa15.72■□□□□ 0.11
SF1-201ENST00000227503 BCL9LQ86UU0 1499 aa15.72■□□□□ 0.11
SF1-201ENST00000227503 RTL9Q8NET4 1388 aa15.72■□□□□ 0.11
SF1-201ENST00000227503 ZNF335Q9H4Z2 1342 aaPredicted RBP15.72■□□□□ 0.11
SF1-201ENST00000227503 NNTQ13423 1086 aa15.72■□□□□ 0.11
SF1-201ENST00000227503 SF3B2Q13435 895 aaKnown RBP15.72■□□□□ 0.11
SF1-201ENST00000227503 SDR42E1Q8WUS8 393 aa15.72■□□□□ 0.11
SF1-201ENST00000227503 HAUS4Q9H6D7 363 aa15.72■□□□□ 0.11
SF1-201ENST00000227503 KLC4Q9NSK0 619 aa15.72■□□□□ 0.11
SF1-201ENST00000227503 ANAPC4Q9UJX5 808 aa15.72■□□□□ 0.11
SF1-201ENST00000227503 CEP131Q9UPN4 1083 aa15.72■□□□□ 0.11
SF1-201ENST00000227503 NCK2O43639 380 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 PRDM1O75626 825 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 NEBLO76041 1014 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 PKN1Q16512 942 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 CCDC152Q4G0S7 254 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 KANK3Q6NY19 840 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 NFRKBQ6P4R8 1299 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 SCLT1Q96NL6 688 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 UBAC1Q9BSL1 405 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 RNF26Q9BY78 433 aaPredicted RBP15.71■□□□□ 0.11
SF1-201ENST00000227503 MLXIPQ9HAP2 919 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 MCM8Q9UJA3 840 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 ODF2LQ9ULJ1 636 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 TNKSO95271 1327 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 FAM153BP0C7A2 387 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 CYP7A1P22680 504 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 LSP1P33241 339 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 IGHMBP2P38935 993 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms