RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 PPP2R5BQ15173 497 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 DIXDC1Q155Q3 683 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 BAIAP2L1Q9UHR4 511 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 LAMC1P11047 1609 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 TFRCP02786 760 aaKnown RBP15.22■□□□□ 0.03
NFKB1-201ENST00000226574 CTNNA1P35221 906 aaKnown RBP15.22■□□□□ 0.03
NFKB1-201ENST00000226574 PARP10Q53GL7 1025 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 FAM182BQ5T319 152 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 USP17L2Q6R6M4 530 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 SMIM5Q71RC9 77 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 CCDC50Q8IVM0 306 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 OR52Z1P0C646 297 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 FXR1P51114 621 aaKnown RBP eCLIP15.22■□□□□ 0.03
NFKB1-201ENST00000226574 TBC1D10BQ4KMP7 808 aaPredicted RBP15.22■□□□□ 0.03
NFKB1-201ENST00000226574 NYAP1Q6ZVC0 841 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 B4GALNT4Q76KP1 1039 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 EXOC4Q96A65 974 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 C8orf37Q96NL8 207 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 TTC26A0AVF1 554 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 EZRP15311 586 aaKnown RBP15.22■□□□□ 0.03
NFKB1-201ENST00000226574 PRCPP42785 496 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 PPP1R7Q15435 360 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 LMBR1Q8WVP7 490 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 BICD1Q96G01 975 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 HYOU1Q9Y4L1 999 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 SPOPO43791 374 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 EIF4A3P38919 411 aaKnown RBP15.22■□□□□ 0.03
NFKB1-201ENST00000226574 IFT88Q13099 833 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 CCDC174Q6PII3 467 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 KRT25Q7Z3Z0 450 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 U2AF1L4Q8WU68 220 aaKnown RBP15.22■□□□□ 0.03
NFKB1-201ENST00000226574 HPS3Q969F9 1004 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 MED4Q9NPJ6 270 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 RTCBQ9Y3I0 505 aaKnown RBP15.22■□□□□ 0.03
NFKB1-201ENST00000226574 ATP6V0A2Q9Y487 856 aa15.22■□□□□ 0.03
NFKB1-201ENST00000226574 HEG1Q9ULI3 1381 aa15.21■□□□□ 0.03
NFKB1-201ENST00000226574 TNIP1Q15025 636 aa15.21■□□□□ 0.03
NFKB1-201ENST00000226574 NHEJ1Q9H9Q4 299 aaPredicted RBP15.21■□□□□ 0.03
NFKB1-201ENST00000226574 PLEKHG1Q9ULL1 1385 aa15.21■□□□□ 0.03
NFKB1-201ENST00000226574 GCNT3O95395 438 aa15.21■□□□□ 0.03
NFKB1-201ENST00000226574 IRX5P78411 483 aaPredicted RBP15.21■□□□□ 0.03
NFKB1-201ENST00000226574 RAD9BQ6WBX8 426 aa15.21■□□□□ 0.03
NFKB1-201ENST00000226574 GSTA5Q7RTV2 222 aa15.21■□□□□ 0.03
NFKB1-201ENST00000226574 ANKS4BQ8N8V4 417 aa15.21■□□□□ 0.03
NFKB1-201ENST00000226574 MYO1AQ9UBC5 1043 aa15.21■□□□□ 0.03
NFKB1-201ENST00000226574 N4BP1O75113 896 aaKnown RBP15.21■□□□□ 0.02
NFKB1-201ENST00000226574 TCP11X2Q5H9J9 407 aa15.21■□□□□ 0.02
NFKB1-201ENST00000226574 HOOK3Q86VS8 718 aa15.21■□□□□ 0.02
NFKB1-201ENST00000226574 GJA10Q969M2 543 aa15.21■□□□□ 0.02
NFKB1-201ENST00000226574 COA7Q96BR5 231 aa15.21■□□□□ 0.02
NFKB1-201ENST00000226574 GPR101Q96P66 508 aaPredicted RBP15.21■□□□□ 0.02
NFKB1-201ENST00000226574 TACO1Q9BSH4 297 aaKnown RBP15.21■□□□□ 0.02
NFKB1-201ENST00000226574 PCDHA12Q9UN75 941 aa15.21■□□□□ 0.02
NFKB1-201ENST00000226574 TNFAIP3P21580 790 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 IFNAR2P48551 515 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 ADCY1Q08828 1119 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 PANX2Q96RD6 677 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 ABHD10Q9NUJ1 306 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 ADAMTS1Q9UHI8 967 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 USP42Q9H9J4 1324 aaKnown RBP15.2■□□□□ 0.02
NFKB1-201ENST00000226574 HEXIM1O94992 359 aaKnown RBP15.2■□□□□ 0.02
NFKB1-201ENST00000226574 PLCG1P19174 1290 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 ADCY7P51828 1080 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 PDCLQ13371 301 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 PDIA6Q15084 440 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 MYOCDQ8IZQ8 938 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 SLC44A5Q8NCS7 719 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 CCDC26Q8TAB7 109 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 CTTNBP2NLQ9P2B4 639 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 ZNF658Q5TYW1 1059 aaPredicted RBP15.2■□□□□ 0.02
NFKB1-201ENST00000226574 SUSD4Q5VX71 490 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 NEK8Q86SG6 692 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 FBF1Q8TES7 1133 aa15.2■□□□□ 0.02
NFKB1-201ENST00000226574 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.2■□□□□ 0.02
NFKB1-201ENST00000226574 KRIT1O00522 736 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 ZNF185O15231 689 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 GPBP1Q86WP2 473 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 TC2NQ8N9U0 490 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 SAMD15Q9P1V8 674 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 PARP3Q9Y6F1 533 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 POTEJP0CG39 1038 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 TCP1P17987 556 aaKnown RBP15.19■□□□□ 0.02
NFKB1-201ENST00000226574 SLC16A2P36021 539 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 SLC1A4P43007 532 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 ENAHQ8N8S7 591 aaPredicted RBP15.19■□□□□ 0.02
NFKB1-201ENST00000226574 P2RX5Q93086 422 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 MLXIPQ9HAP2 919 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.19■□□□□ 0.022e-6■■■□□ 14.9
NFKB1-201ENST00000226574 PRDM4Q9UKN5 801 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 MRFAP1Q9Y605 127 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 GSG1L2A8MUP6 293 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 ATP8B1O43520 1251 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 PRDX5P30044 214 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 WDR78Q5VTH9 848 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 TBCKQ8TEA7 893 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 ANKRD2Q9GZV1 360 aa15.19■□□□□ 0.02
NFKB1-201ENST00000226574 CEP152O94986 1710 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 FRMD3A2A2Y4 597 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 NCK2O43639 380 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 CALCOCO2Q13137 446 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms