RNA–Protein interactions for RNA: ENST00000222305.7

USF2-201, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF2, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-201ENST00000222305 MCTP1Q6DN14 999 aa26.5■■□□□ 1.83
USF2-201ENST00000222305 RGMBQ6NW40 437 aa26.5■■□□□ 1.83
USF2-201ENST00000222305 FASTKD5Q7L8L6 764 aaKnown RBP26.5■■□□□ 1.83
USF2-201ENST00000222305 MS4A4AQ96JQ5 239 aa26.5■■□□□ 1.83
USF2-201ENST00000222305 PHF20Q9BVI0 1012 aa26.5■■□□□ 1.83
USF2-201ENST00000222305 AGTPBP1Q9UPW5 1226 aa26.5■■□□□ 1.83
USF2-201ENST00000222305 F13A1P00488 732 aa26.49■■□□□ 1.83
USF2-201ENST00000222305 MMP1P03956 469 aa26.49■■□□□ 1.83
USF2-201ENST00000222305 PDIA4P13667 645 aaKnown RBP26.49■■□□□ 1.83
USF2-201ENST00000222305 GTF2A2P52657 109 aa26.49■■□□□ 1.83
USF2-201ENST00000222305 NAPAP54920 295 aa26.49■■□□□ 1.83
USF2-201ENST00000222305 ATG4CQ96DT6 458 aa26.49■■□□□ 1.83
USF2-201ENST00000222305 SH3GLB2Q9NR46 395 aa26.49■■□□□ 1.83
USF2-201ENST00000222305 APLP1P51693 650 aa26.48■■□□□ 1.83
USF2-201ENST00000222305 COG2Q14746 738 aa26.48■■□□□ 1.83
USF2-201ENST00000222305 USH1GQ495M9 461 aa26.48■■□□□ 1.83
USF2-201ENST00000222305 hCG_1984214I3L0E3 225 aa26.47■■□□□ 1.83
USF2-201ENST00000222305 DSG3P32926 999 aa26.47■■□□□ 1.83
USF2-201ENST00000222305 NLRP5P59047 1200 aa26.47■■□□□ 1.83
USF2-201ENST00000222305 GPAT2Q6NUI2 795 aa26.47■■□□□ 1.83
USF2-201ENST00000222305 FBXO11Q86XK2 927 aa26.47■■□□□ 1.83
USF2-201ENST00000222305 ZNF713Q8N859 430 aaPredicted RBP26.47■■□□□ 1.83
USF2-201ENST00000222305 CCL15-CCL14A0A0B4J2E2 113 aa26.47■■□□□ 1.83
USF2-201ENST00000222305 CETPP11597 493 aa26.47■■□□□ 1.83
USF2-201ENST00000222305 HOXA7P31268 230 aaPredicted RBP26.47■■□□□ 1.83
USF2-201ENST00000222305 CCL15Q16663 113 aa26.47■■□□□ 1.83
USF2-201ENST00000222305 RGS22Q8NE09 1264 aa26.47■■□□□ 1.83
USF2-201ENST00000222305 CCDC148Q8NFR7 591 aa26.47■■□□□ 1.83
USF2-201ENST00000222305 AMNQ9BXJ7 453 aa26.47■■□□□ 1.83
USF2-201ENST00000222305 SLC38A10Q9HBR0 1119 aa26.47■■□□□ 1.83
USF2-201ENST00000222305 SPDYE16A6NNV3 312 aaPredicted RBP26.46■■□□□ 1.83
USF2-201ENST00000222305 KIF28PB7ZC32 967 aa26.46■■□□□ 1.83
USF2-201ENST00000222305 NPY5RQ15761 445 aa26.46■■□□□ 1.83
USF2-201ENST00000222305 PAXIP1Q6ZW49 1069 aaPredicted RBP26.46■■□□□ 1.83
USF2-201ENST00000222305 BRI3BPQ8WY22 251 aa26.46■■□□□ 1.83
USF2-201ENST00000222305 TNPO1Q92973 898 aaKnown RBP26.46■■□□□ 1.83
USF2-201ENST00000222305 PCDHA1Q9Y5I3 950 aa26.46■■□□□ 1.83
USF2-201ENST00000222305 RBBP6Q7Z6E9 1792 aaKnown RBP26.46■■□□□ 1.83
USF2-201ENST00000222305 VWA5AO00534 786 aa26.45■■□□□ 1.82
USF2-201ENST00000222305 ADAMTS3O15072 1205 aa26.45■■□□□ 1.82
USF2-201ENST00000222305 SLC10A3P09131 477 aa26.45■■□□□ 1.82
USF2-201ENST00000222305 KIF23Q02241 960 aaPredicted RBP26.45■■□□□ 1.82
USF2-201ENST00000222305 RESTQ13127 1097 aa26.45■■□□□ 1.82
USF2-201ENST00000222305 GRM1Q13255 1194 aa26.45■■□□□ 1.82
USF2-201ENST00000222305 FOXD4L6Q3SYB3 417 aaPredicted RBP26.45■■□□□ 1.82
USF2-201ENST00000222305 FOXD4L3Q6VB84 417 aaPredicted RBP26.45■■□□□ 1.82
USF2-201ENST00000222305 DIS3L2Q8IYB7 885 aaKnown RBP26.45■■□□□ 1.82
USF2-201ENST00000222305 OXER1Q8TDS5 423 aa26.45■■□□□ 1.82
USF2-201ENST00000222305 CCDC12Q8WUD4 166 aaPredicted RBP26.45■■□□□ 1.82
USF2-201ENST00000222305 ZNF536O15090 1300 aa26.45■■□□□ 1.82
USF2-201ENST00000222305 IRX3P78415 501 aaPredicted RBP26.44■■□□□ 1.82
USF2-201ENST00000222305 SAFBQ15424 915 aaKnown RBP eCLIP26.44■■□□□ 1.82
USF2-201ENST00000222305 CPXCR1Q8N123 301 aa26.44■■□□□ 1.82
USF2-201ENST00000222305 ASCC2Q9H1I8 757 aaPredicted RBP26.44■■□□□ 1.82
USF2-201ENST00000222305 CTDP1Q9Y5B0 961 aaPredicted RBP26.44■■□□□ 1.82
USF2-201ENST00000222305 MYPNQ86TC9 1320 aa26.44■■□□□ 1.82
USF2-201ENST00000222305 SMCO2A6NFE2 343 aa26.43■■□□□ 1.82
USF2-201ENST00000222305 BTBD18B2RXH4 712 aa26.43■■□□□ 1.82
USF2-201ENST00000222305 ZBED4O75132 1171 aa26.43■■□□□ 1.82
USF2-201ENST00000222305 AGBL1Q96MI9 1066 aa26.43■■□□□ 1.82
USF2-201ENST00000222305 ZMYND12Q9H0C1 365 aa26.43■■□□□ 1.82
USF2-201ENST00000222305 RAVER2Q9HCJ3 691 aaKnown RBP26.43■■□□□ 1.82
USF2-201ENST00000222305 CREBZFQ9NS37 354 aa26.43■■□□□ 1.82
USF2-201ENST00000222305 HOXC10Q9NYD6 342 aa26.43■■□□□ 1.82
USF2-201ENST00000222305 ADAMTS5Q9UNA0 930 aa26.43■■□□□ 1.82
USF2-201ENST00000222305 KRT2P35908 639 aa26.43■■□□□ 1.82
USF2-201ENST00000222305 HTRA3P83110 453 aa26.43■■□□□ 1.82
USF2-201ENST00000222305 NR5A1Q13285 461 aa26.43■■□□□ 1.82
USF2-201ENST00000222305 PABPC4Q13310 644 aaKnown RBP eCLIP26.43■■□□□ 1.821e-7■■■■□ 21.3
USF2-201ENST00000222305 GNL2Q13823 731 aaKnown RBP26.43■■□□□ 1.82
USF2-201ENST00000222305 PPP1R18Q6NYC8 613 aa26.43■■□□□ 1.82
USF2-201ENST00000222305 FAM173BQ6P4H8 233 aa26.43■■□□□ 1.82
USF2-201ENST00000222305 CHAMP1Q96JM3 812 aa26.43■■□□□ 1.82
USF2-201ENST00000222305 P2RX7Q99572 595 aaKnown RBP26.43■■□□□ 1.82
USF2-201ENST00000222305 FAM155AB1AL88 458 aaPredicted RBP26.42■■□□□ 1.82
USF2-201ENST00000222305 BTBD19C9JJ37 291 aa26.42■■□□□ 1.82
USF2-201ENST00000222305 ICAM1P05362 532 aa26.42■■□□□ 1.82
USF2-201ENST00000222305 CALML3P27482 149 aa26.42■■□□□ 1.82
USF2-201ENST00000222305 CYP4F22Q6NT55 531 aa26.42■■□□□ 1.82
USF2-201ENST00000222305 REPS2Q8NFH8 660 aa26.42■■□□□ 1.82
USF2-201ENST00000222305 CCPG1Q9ULG6 757 aa26.42■■□□□ 1.82
USF2-201ENST00000222305 PCDHA4Q9UN74 947 aa26.42■■□□□ 1.82
USF2-201ENST00000222305 FDX1P10109 184 aa26.41■■□□□ 1.82
USF2-201ENST00000222305 BLIDQ8IZY5 108 aa26.41■■□□□ 1.82
USF2-201ENST00000222305 ZSCAN16Q9H4T2 348 aaPredicted RBP26.41■■□□□ 1.82
USF2-201ENST00000222305 BRMS1Q9HCU9 246 aa26.41■■□□□ 1.82
USF2-201ENST00000222305 C6orf50Q9HD87 102 aa26.41■■□□□ 1.82
USF2-201ENST00000222305 ESYT2A0FGR8 921 aa26.4■■□□□ 1.82
USF2-201ENST00000222305 OSBPP22059 807 aa26.4■■□□□ 1.82
USF2-201ENST00000222305 POTEEQ6S8J3 1075 aa26.4■■□□□ 1.82
USF2-201ENST00000222305 FAM177A1Q8N128 213 aaPredicted RBP26.4■■□□□ 1.82
USF2-201ENST00000222305 HHIPL1Q96JK4 782 aa26.4■■□□□ 1.82
USF2-201ENST00000222305 PTPN18Q99952 460 aa26.4■■□□□ 1.82
USF2-201ENST00000222305 PDHXO00330 501 aa26.39■■□□□ 1.82
USF2-201ENST00000222305 PEX10O60683 326 aa26.39■■□□□ 1.82
USF2-201ENST00000222305 U2AF2P26368 475 aaKnown RBP eCLIP26.39■■□□□ 1.82
USF2-201ENST00000222305 ADCY7P51828 1080 aa26.39■■□□□ 1.82
USF2-201ENST00000222305 HERVK_113P62684 666 aa26.39■■□□□ 1.82
USF2-201ENST00000222305 TMEM132BQ14DG7 1078 aa26.39■■□□□ 1.82
USF2-201ENST00000222305 FAM43AQ8N2R8 423 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms