RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 BLOC1S6Q9UL45 172 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 PCDHA7Q9UN72 937 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 SLC4A4Q9Y6R1 1079 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 COL1A1P02452 1464 aaPredicted RBP15.2■□□□□ 0.02
GABPB1-201ENST00000220429 CACNA1SQ13698 1873 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 SSBP05455 408 aaKnown RBP eCLIP15.2■□□□□ 0.02
GABPB1-201ENST00000220429 AKNAD1Q5T1N1 836 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 TBC1D9BQ66K14 1250 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 BZW1Q7L1Q6 419 aaKnown RBP15.2■□□□□ 0.02
GABPB1-201ENST00000220429 ADGRA1Q86SQ6 560 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 RBM12BQ8IXT5 1001 aaKnown RBP15.2■□□□□ 0.02
GABPB1-201ENST00000220429 FUKQ8N0W3 1084 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 B4GALNT2Q8NHY0 566 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 NGLY1Q96IV0 654 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 SH3GL2Q99962 352 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 PAGR1Q9BTK6 254 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 CLIC4Q9Y696 253 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 GOLGA6L7A0A1B0GV03 622 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 ZBTB43O43298 467 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 GNAT2P19087 354 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 RANBP1P43487 201 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 KIF23Q02241 960 aaPredicted RBP15.2■□□□□ 0.02
GABPB1-201ENST00000220429 DPCR1Q3MIW9 517 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 TMEM67Q5HYA8 995 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 BRAPQ7Z569 592 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 MFN1Q8IWA4 741 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 LINC00301Q8NCQ3 95 aa15.2■□□□□ 0.02
GABPB1-201ENST00000220429 A6NNZ2 444 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 AGPSO00116 658 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 FAM160A1Q05DH4 1040 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 NTRK3Q16288 839 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 TUBB8Q3ZCM7 444 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 CWF19L1Q69YN2 538 aaKnown RBP15.19■□□□□ 0.02
GABPB1-201ENST00000220429 FSIP1Q8NA03 581 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 PHKBQ93100 1093 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 MMTAG2Q9BU76 263 aaKnown RBP15.19■□□□□ 0.02
GABPB1-201ENST00000220429 MYL10Q9BUA6 226 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 YIPF3Q9GZM5 350 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 FAM217BQ9NTX9 383 aaPredicted RBP15.19■□□□□ 0.02
GABPB1-201ENST00000220429 STX10O60499 249 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 TOP1P11387 765 aaKnown RBP15.19■□□□□ 0.02
GABPB1-201ENST00000220429 LMOD1P29536 600 aaPredicted RBP15.19■□□□□ 0.02
GABPB1-201ENST00000220429 LIFRP42702 1097 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 DRP2Q13474 957 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 UBE4AQ14139 1066 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 SETDB1Q15047 1291 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 TBC1D5Q92609 795 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 CELF1Q92879 486 aaKnown RBP15.19■□□□□ 0.02
GABPB1-201ENST00000220429 CCDC114Q96M63 670 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 PLEKHG4BQ96PX9 1271 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 OSBPL9Q96SU4 736 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 TSGA10Q9BZW7 698 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 POLR3EQ9NVU0 708 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 RGL1Q9NZL6 768 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 MINPP1Q9UNW1 487 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 TRPC6Q9Y210 931 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 PCDHGC5Q9Y5F6 944 aa15.19■□□□□ 0.02
GABPB1-201ENST00000220429 BAZ2AQ9UIF9 1905 aaKnown RBP15.19■□□□□ 0.02
GABPB1-201ENST00000220429 ERICH2A1L162 156 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 IFIT3O14879 490 aaKnown RBP15.18■□□□□ 0.02
GABPB1-201ENST00000220429 CBFA2T2O43439 604 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 SMNDC1O75940 238 aaKnown RBP eCLIP15.18■□□□□ 0.02
GABPB1-201ENST00000220429 CYP7A1P22680 504 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 UBASH3AP57075 661 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 USP4Q13107 963 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 ACCSLQ4AC99 568 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 ADALQ6DHV7 355 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 MFSD6Q6ZSS7 791 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 SPAG5Q96R06 1193 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 ALG1Q9BT22 464 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 NACAP1Q9BZK3 213 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 CNNM2Q9H8M5 875 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 ABCF2Q9UG63 623 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 MYH2Q9UKX2 1941 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 GOLGA8AA7E2F4 631 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 ZSCAN9O15535 394 aaPredicted RBP15.18■□□□□ 0.02
GABPB1-201ENST00000220429 RANBP6O60518 1105 aaKnown RBP15.18■□□□□ 0.02
GABPB1-201ENST00000220429 NCAPHQ15003 741 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 STK38Q15208 465 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 SLC10A5Q5PT55 438 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 MYLK4Q86YV6 388 aaPredicted RBP15.18■□□□□ 0.02
GABPB1-201ENST00000220429 KRT23Q9C075 422 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 SRP68Q9UHB9 627 aaKnown RBP15.18■□□□□ 0.02
GABPB1-201ENST00000220429 MYH13Q9UKX3 1938 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 COL24A1Q17RW2 1714 aa15.18■□□□□ 0.02
GABPB1-201ENST00000220429 SPDYE3A6NKU9 549 aa15.17■□□□□ 0.02
GABPB1-201ENST00000220429 YEATS4O95619 227 aa15.17■□□□□ 0.02
GABPB1-201ENST00000220429 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.17■□□□□ 0.02
GABPB1-201ENST00000220429 VSTM4Q8IW00 320 aa15.17■□□□□ 0.02
GABPB1-201ENST00000220429 NOA1Q8NC60 698 aaKnown RBP15.17■□□□□ 0.02
GABPB1-201ENST00000220429 MRPS27Q92552 414 aaKnown RBP15.17■□□□□ 0.02
GABPB1-201ENST00000220429 EPAS1Q99814 870 aa15.17■□□□□ 0.02
GABPB1-201ENST00000220429 CORO1CQ9ULV4 474 aaPredicted RBP15.17■□□□□ 0.02
GABPB1-201ENST00000220429 MCM3P25205 808 aa15.17■□□□□ 0.02
GABPB1-201ENST00000220429 CD151P48509 253 aa15.17■□□□□ 0.02
GABPB1-201ENST00000220429 PAPOLAP51003 745 aaKnown RBP15.17■□□□□ 0.02
GABPB1-201ENST00000220429 IFFO1Q0D2I5 559 aa15.17■□□□□ 0.02
GABPB1-201ENST00000220429 RRP12Q5JTH9 1297 aaKnown RBP15.17■□□□□ 0.02
GABPB1-201ENST00000220429 NSMCE1Q8WV22 266 aa15.17■□□□□ 0.02
GABPB1-201ENST00000220429 NARFQ9UHQ1 456 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms