RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 CRYMQ14894 314 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 U2AF1L4Q8WU68 220 aaKnown RBP12.09□□□□□ -0.47
USP31-201ENST00000219689 CHMP2BQ9UQN3 213 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 TRHP20396 242 aaPredicted RBP12.08□□□□□ -0.47
USP31-201ENST00000219689 CORO7P57737 925 aa12.08□□□□□ -0.47
USP31-201ENST00000219689 MYLK4Q86YV6 388 aaPredicted RBP12.08□□□□□ -0.47
USP31-201ENST00000219689 TPD52L2O43399 206 aaKnown RBP12.08□□□□□ -0.48
USP31-201ENST00000219689 RBM6P78332 1123 aaKnown RBP12.08□□□□□ -0.48
USP31-201ENST00000219689 TOGARAM2Q6ZUX3 1019 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 BATF3Q9NR55 127 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 GCC2Q8IWJ2 1684 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 PI4KAP2A4QPH2 592 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 NOP14P78316 857 aaKnown RBP12.08□□□□□ -0.48
USP31-201ENST00000219689 ART3Q13508 389 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 PI4KAP1Q8N8J0 262 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 RSAD2Q8WXG1 361 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 ARHGAP45Q92619 1136 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 TRIM56Q9BRZ2 755 aaKnown RBP12.08□□□□□ -0.48
USP31-201ENST00000219689 ZRANB2O95218 330 aaKnown RBP eCLIP12.08□□□□□ -0.48
USP31-201ENST00000219689 CTCFP49711 727 aaPredicted RBP12.08□□□□□ -0.48
USP31-201ENST00000219689 ZNF653Q96CK0 615 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 PA2G4Q9UQ80 394 aaKnown RBP12.08□□□□□ -0.48
USP31-201ENST00000219689 CTTNBP2Q8WZ74 1663 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 RTEL1-TNFRSF6BF6WH68 1400 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 CAND2O75155 1236 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 TYW1Q9NV66 732 aaKnown RBP12.08□□□□□ -0.48
USP31-201ENST00000219689 KCNA3P22001 575 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 CAPN11Q9UMQ6 739 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 PALM3A6NDB9 673 aaPredicted RBP12.08□□□□□ -0.48
USP31-201ENST00000219689 STX8Q9UNK0 236 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 CALUO43852 315 aaPredicted RBP12.08□□□□□ -0.48
USP31-201ENST00000219689 TTC4O95801 387 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 ESRRAP11474 423 aaPredicted RBP12.08□□□□□ -0.48
USP31-201ENST00000219689 PDE6AP16499 860 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 PHKBQ93100 1093 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 C1orf146Q5VVC0 180 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 TUBB6Q9BUF5 446 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 TRAIPQ9BWF2 469 aa12.08□□□□□ -0.48
USP31-201ENST00000219689 CASP2P42575 452 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 ANKRD7Q92527 254 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 ESR2Q92731 530 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 MOCS3O95396 460 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 AP2B1P63010 937 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 BASP1P80723 227 aaKnown RBP12.07□□□□□ -0.48
USP31-201ENST00000219689 BSPRYQ5W0U4 402 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 TMTC2Q8N394 836 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 NSFL1CQ9UNZ2 370 aaKnown RBP12.07□□□□□ -0.48
USP31-201ENST00000219689 WDR46O15213 610 aaKnown RBP12.07□□□□□ -0.48
USP31-201ENST00000219689 KLC1Q07866 573 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 PPP2R5EQ16537 467 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 LIN9Q5TKA1 542 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 UBE3BQ7Z3V4 1068 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 ENOX1Q8TC92 643 aaKnown RBP12.07□□□□□ -0.48
USP31-201ENST00000219689 ARHGAP10A1A4S6 786 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 WBP4O75554 376 aaKnown RBP12.07□□□□□ -0.48
USP31-201ENST00000219689 SKAP2O75563 359 aaPredicted RBP12.07□□□□□ -0.48
USP31-201ENST00000219689 GUCY1A3Q02108 690 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 SERPINB3P29508 390 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 CASP14P31944 242 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 KRT79Q5XKE5 535 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 NT5C3AQ9H0P0 336 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 PARD3Q8TEW0 1356 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 USP27XA6NNY8 438 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 ARHGAP44Q17R89 818 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 ZBTB41Q5SVQ8 909 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 JADE1Q6IE81 842 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 SIKE1Q9BRV8 207 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 PACSIN2Q9UNF0 486 aaPredicted RBP12.07□□□□□ -0.48
USP31-201ENST00000219689 SLFN14P0C7P3 912 aa12.07□□□□□ -0.48
USP31-201ENST00000219689 CACNA1FO60840 1977 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 RPL13P26373 211 aaKnown RBP12.06□□□□□ -0.48
USP31-201ENST00000219689 KIAA0825Q8IV33 1275 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 RAPGEF5Q92565 580 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 MTMR6Q9Y217 621 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 RNF123Q5XPI4 1314 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 PASKQ96RG2 1323 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 SPDYE3A6NKU9 549 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 CDR2Q01850 454 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 ATP5HO75947 161 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 LMNB1P20700 586 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 RINLQ6ZS11 566 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 OLFML1Q6UWY5 402 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 SESTD1Q86VW0 696 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 RNF169Q8NCN4 708 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 PROCA1Q8NCQ7 364 aaPredicted RBP12.06□□□□□ -0.48
USP31-201ENST00000219689 PFKFB2O60825 505 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 SRGAP2O75044 1071 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 MAGOHP61326 146 aaKnown RBP12.06□□□□□ -0.48
USP31-201ENST00000219689 CUL4BQ13620 913 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 MAGOHBQ96A72 148 aaKnown RBP12.06□□□□□ -0.48
USP31-201ENST00000219689 TBC1D23Q9NUY8 699 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 SERTAD1Q9UHV2 236 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 ATP5J2-PTCD1G3V325 749 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 PTCD1O75127 700 aaKnown RBP12.06□□□□□ -0.48
USP31-201ENST00000219689 IFNB1P01574 187 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 HP1BP3Q5SSJ5 553 aaPredicted RBP12.06□□□□□ -0.48
USP31-201ENST00000219689 OGFOD1Q8N543 542 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 STOML1Q9UBI4 398 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 ZMYND12Q9H0C1 365 aa12.06□□□□□ -0.48
USP31-201ENST00000219689 EPN3Q9H201 632 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms