RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 KATNBL1Q9H079 304 aa18.79■□□□□ 0.6
NME3-201ENST00000219302 UPF3AQ9H1J1 476 aaKnown RBP18.79■□□□□ 0.6
NME3-201ENST00000219302 FBXO40Q9UH90 709 aa18.79■□□□□ 0.6
NME3-201ENST00000219302 GJA9P57773 515 aa18.78■□□□□ 0.6
NME3-201ENST00000219302 NKX3-2P78367 333 aa18.78■□□□□ 0.6
NME3-201ENST00000219302 SLFN13Q68D06 897 aa18.78■□□□□ 0.6
NME3-201ENST00000219302 LRRC47Q8N1G4 583 aaKnown RBP18.78■□□□□ 0.6
NME3-201ENST00000219302 SEC62Q99442 399 aaKnown RBP18.78■□□□□ 0.6
NME3-201ENST00000219302 CTDP1Q9Y5B0 961 aaPredicted RBP18.78■□□□□ 0.6
NME3-201ENST00000219302 MYH4Q9Y623 1939 aa18.77■□□□□ 0.6
NME3-201ENST00000219302 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.77■□□□□ 0.6
NME3-201ENST00000219302 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.77■□□□□ 0.6
NME3-201ENST00000219302 CTAGE5O15320 804 aa18.77■□□□□ 0.6
NME3-201ENST00000219302 ASGR1P07306 291 aa18.77■□□□□ 0.6
NME3-201ENST00000219302 FDX1P10109 184 aa18.77■□□□□ 0.6
NME3-201ENST00000219302 BMP3P12645 472 aa18.77■□□□□ 0.6
NME3-201ENST00000219302 C16orf59Q7L2K0 433 aa18.77■□□□□ 0.6
NME3-201ENST00000219302 ARMCX2Q7L311 632 aa18.77■□□□□ 0.6
NME3-201ENST00000219302 PCSK9Q8NBP7 692 aaKnown RBP18.77■□□□□ 0.6
NME3-201ENST00000219302 GLT1D1Q96MS3 346 aa18.77■□□□□ 0.6
NME3-201ENST00000219302 PLIN4Q96Q06 1357 aa18.77■□□□□ 0.6
NME3-201ENST00000219302 MCM3APO60318 1980 aa18.77■□□□□ 0.59
NME3-201ENST00000219302 ZNF536O15090 1300 aa18.76■□□□□ 0.59
NME3-201ENST00000219302 C6orf222P0C671 652 aaPredicted RBP18.76■□□□□ 0.59
NME3-201ENST00000219302 TFAP4Q01664 338 aa18.76■□□□□ 0.59
NME3-201ENST00000219302 CNTN2Q02246 1040 aa18.76■□□□□ 0.59
NME3-201ENST00000219302 MFSD5Q6N075 450 aa18.76■□□□□ 0.59
NME3-201ENST00000219302 CCDC144CPQ8IYA2 1237 aa18.76■□□□□ 0.59
NME3-201ENST00000219302 FAM133AQ8N9E0 248 aa18.76■□□□□ 0.59
NME3-201ENST00000219302 PI4K2BQ8TCG2 481 aa18.76■□□□□ 0.59
NME3-201ENST00000219302 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.76■□□□□ 0.598e-10■□□□□ 9.4
NME3-201ENST00000219302 TMEM232C9JQI7 657 aa18.75■□□□□ 0.59
NME3-201ENST00000219302 ARVCFO00192 962 aa18.75■□□□□ 0.59
NME3-201ENST00000219302 TSPY3P0CV98 308 aa18.75■□□□□ 0.59
NME3-201ENST00000219302 TSPY8P0CW00 308 aa18.75■□□□□ 0.59
NME3-201ENST00000219302 PDE4BQ07343 736 aa18.75■□□□□ 0.59
NME3-201ENST00000219302 LRRFIP1Q32MZ4 808 aaKnown RBP18.75■□□□□ 0.59
NME3-201ENST00000219302 GNASQ5JWF2 1037 aa18.75■□□□□ 0.59
NME3-201ENST00000219302 STAG1Q8WVM7 1258 aa18.75■□□□□ 0.59
NME3-201ENST00000219302 GMCL1Q96IK5 515 aa18.75■□□□□ 0.59
NME3-201ENST00000219302 NACAP1Q9BZK3 213 aa18.75■□□□□ 0.59
NME3-201ENST00000219302 MROH7Q68CQ1 1323 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 TTC41PQ6P2S7 1318 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 SOWAHBA6NEL2 793 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 FOXP2O15409 715 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 PLA2G6O60733 806 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 FOSL2P15408 326 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 DNAJB2P25686 324 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 PPARAQ07869 468 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 GRIN2CQ14957 1233 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 ZMYM1Q5SVZ6 1142 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 RASIP1Q5U651 963 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 FAM126BQ8IXS8 530 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 CHURC1Q8WUH1 139 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 AGBL1Q96MI9 1066 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 ACAD9Q9H845 621 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 SPC25Q9HBM1 224 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 A1CFQ9NQ94 594 aaKnown RBP18.74■□□□□ 0.59
NME3-201ENST00000219302 HOMER2Q9NSB8 354 aa18.74■□□□□ 0.59
NME3-201ENST00000219302 A0A0U1RQG5 324 aaPredicted RBP18.73■□□□□ 0.59
NME3-201ENST00000219302 MCCP23508 829 aa18.73■□□□□ 0.59
NME3-201ENST00000219302 STAT2P52630 851 aa18.73■□□□□ 0.59
NME3-201ENST00000219302 TMEM240Q5SV17 173 aa18.73■□□□□ 0.59
NME3-201ENST00000219302 FAM160B2Q86V87 743 aa18.73■□□□□ 0.59
NME3-201ENST00000219302 OTUD7AQ8TE49 926 aaPredicted RBP18.73■□□□□ 0.59
NME3-201ENST00000219302 VTI1AQ96AJ9 217 aa18.73■□□□□ 0.59
NME3-201ENST00000219302 NAPBQ9H115 298 aa18.73■□□□□ 0.59
NME3-201ENST00000219302 GNEQ9Y223 722 aaKnown RBP18.73■□□□□ 0.59
NME3-201ENST00000219302 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.73■□□□□ 0.59
NME3-201ENST00000219302 PCDHB15Q9Y5E8 787 aa18.73■□□□□ 0.59
NME3-201ENST00000219302 ASTN1O14525 1302 aa18.73■□□□□ 0.59
NME3-201ENST00000219302 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.72■□□□□ 0.59
NME3-201ENST00000219302 ERC2O15083 957 aa18.72■□□□□ 0.59
NME3-201ENST00000219302 CD4P01730 458 aa18.72■□□□□ 0.59
NME3-201ENST00000219302 SLC3A2P08195 630 aaKnown RBP18.72■□□□□ 0.59
NME3-201ENST00000219302 SLC1A4P43007 532 aa18.72■□□□□ 0.59
NME3-201ENST00000219302 PPIGQ13427 754 aaKnown RBP eCLIP18.72■□□□□ 0.591e-15■□□□□ 10.6
NME3-201ENST00000219302 TKFCQ3LXA3 575 aa18.72■□□□□ 0.59
NME3-201ENST00000219302 SLC43A3Q8NBI5 491 aa18.72■□□□□ 0.59
NME3-201ENST00000219302 INCENPQ9NQS7 918 aa18.72■□□□□ 0.59
NME3-201ENST00000219302 IL17RBQ9NRM6 502 aa18.72■□□□□ 0.59
NME3-201ENST00000219302 RNF146Q9NTX7 359 aa18.72■□□□□ 0.59
NME3-201ENST00000219302 TTC28Q96AY4 2481 aa18.71■□□□□ 0.59
NME3-201ENST00000219302 CSF2RAP15509 400 aa18.71■□□□□ 0.59
NME3-201ENST00000219302 NOVP48745 357 aa18.71■□□□□ 0.59
NME3-201ENST00000219302 BEX3Q00994 111 aa18.71■□□□□ 0.59
NME3-201ENST00000219302 TNFAIP2Q03169 654 aa18.71■□□□□ 0.59
NME3-201ENST00000219302 RCSD1Q6JBY9 416 aa18.71■□□□□ 0.59
NME3-201ENST00000219302 TRERF1Q96PN7 1200 aa18.71■□□□□ 0.59
NME3-201ENST00000219302 ZNF576Q9H609 170 aa18.71■□□□□ 0.59
NME3-201ENST00000219302 ASB14A6NK59 587 aa18.7■□□□□ 0.58
NME3-201ENST00000219302 ZNF365Q70YC5 407 aa18.7■□□□□ 0.58
NME3-201ENST00000219302 TMEM199Q8N511 208 aa18.7■□□□□ 0.58
NME3-201ENST00000219302 CHMP4CQ96CF2 233 aa18.7■□□□□ 0.58
NME3-201ENST00000219302 TIFAQ96CG3 184 aa18.7■□□□□ 0.58
NME3-201ENST00000219302 FSD1Q9BTV5 496 aa18.7■□□□□ 0.58
NME3-201ENST00000219302 PRR12Q9ULL5 1215 aa18.7■□□□□ 0.58
NME3-201ENST00000219302 MYO9BQ13459 2157 aa18.69■□□□□ 0.58
NME3-201ENST00000219302 SPTBN5Q9NRC6 3674 aaKnown RBP18.69■□□□□ 0.58
NME3-201ENST00000219302 GRXCR1A8MXD5 290 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms