RNA–Protein interactions for RNA: ENST00000216962.8

PYGB-201, Transcript of glycogen phosphorylase B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PYGB, Length 4,134 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYGB-201ENST00000216962 XRN1Q8IZH2 1706 aaKnown RBP11.13□□□□□ -0.63
PYGB-201ENST00000216962 HARSP12081 509 aaKnown RBP11.13□□□□□ -0.63
PYGB-201ENST00000216962 SCG2P13521 617 aa11.13□□□□□ -0.63
PYGB-201ENST00000216962 GBP2P32456 591 aaPredicted RBP11.13□□□□□ -0.63
PYGB-201ENST00000216962 CFAP221Q4G0U5 840 aa11.13□□□□□ -0.63
PYGB-201ENST00000216962 MAEAQ7L5Y9 396 aa11.13□□□□□ -0.63
PYGB-201ENST00000216962 SPATS2Q86XZ4 545 aaKnown RBP11.13□□□□□ -0.63
PYGB-201ENST00000216962 CCDC170Q8IYT3 715 aa11.13□□□□□ -0.63
PYGB-201ENST00000216962 ITIH6Q6UXX5 1313 aa11.13□□□□□ -0.63
PYGB-201ENST00000216962 COL15A1P39059 1388 aa11.13□□□□□ -0.63
PYGB-201ENST00000216962 NBPF26B4DH59 902 aa11.13□□□□□ -0.63
PYGB-201ENST00000216962 PRPF3O43395 683 aaKnown RBP11.13□□□□□ -0.63
PYGB-201ENST00000216962 EZRP15311 586 aaKnown RBP11.13□□□□□ -0.63
PYGB-201ENST00000216962 GNA11P29992 359 aa11.13□□□□□ -0.63
PYGB-201ENST00000216962 TCP10Q12799 353 aa11.13□□□□□ -0.63
PYGB-201ENST00000216962 FAM98CQ17RN3 349 aaKnown RBP11.13□□□□□ -0.63
PYGB-201ENST00000216962 NBPF10Q6P3W6 841 aaKnown RBP11.13□□□□□ -0.63
PYGB-201ENST00000216962 NBPF15Q8N660 670 aa11.13□□□□□ -0.63
PYGB-201ENST00000216962 IGDCC4Q8TDY8 1250 aa11.13□□□□□ -0.63
PYGB-201ENST00000216962 STAG1Q8WVM7 1258 aa11.13□□□□□ -0.63
PYGB-201ENST00000216962 VIPAS39Q9H9C1 493 aa11.13□□□□□ -0.63
PYGB-201ENST00000216962 JRKLQ9Y4A0 524 aa11.13□□□□□ -0.63
PYGB-201ENST00000216962 SMIM23A6NLE4 172 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 EIF3CLB5ME19 914 aaKnown RBP11.12□□□□□ -0.63
PYGB-201ENST00000216962 CCT5P48643 541 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 PPM1FP49593 454 aaPredicted RBP11.12□□□□□ -0.63
PYGB-201ENST00000216962 CCDC121Q6ZUS5 278 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 EIF3CQ99613 913 aaKnown RBP11.12□□□□□ -0.63
PYGB-201ENST00000216962 TUBGCP2Q9BSJ2 902 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 ISCA1Q9BUE6 129 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 DENND2AQ9ULE3 1009 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 MYL1P05976 194 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 LDHBP07195 334 aaKnown RBP11.12□□□□□ -0.63
PYGB-201ENST00000216962 TTLL11Q8NHH1 800 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 MAP3K14Q99558 947 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 ZBED6P86452 979 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 APBA1Q02410 837 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 TRIM28Q13263 835 aaKnown RBP11.12□□□□□ -0.63
PYGB-201ENST00000216962 BEND6Q5SZJ8 279 aaPredicted RBP11.12□□□□□ -0.63
PYGB-201ENST00000216962 SV2BQ7L1I2 683 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 C2CD5Q86YS7 1000 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 BLIDQ8IZY5 108 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 MSANTD4Q8NCY6 345 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 FAM184BQ9ULE4 1060 aa11.12□□□□□ -0.63
PYGB-201ENST00000216962 ANO9A1A5B4 782 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 COBLO75128 1261 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 USP14P54578 494 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 PLCB3Q01970 1234 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 ICE2Q659A1 982 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 TYW1BQ6NUM6 668 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 VTI1AQ96AJ9 217 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 DHTKD1Q96HY7 919 aaPredicted RBP11.11□□□□□ -0.63
PYGB-201ENST00000216962 TMEM110-MUSTN1A8MSY1 372 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 CHMP2AO43633 222 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 ZNF18P17022 549 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 DESP17661 470 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 CALRP27797 417 aaKnown RBP11.11□□□□□ -0.63
PYGB-201ENST00000216962 LIG3P49916 1009 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 SF3A3Q12874 501 aaKnown RBP eCLIP11.11□□□□□ -0.636e-8■■■■■ 35.8
PYGB-201ENST00000216962 TBX2Q13207 712 aaPredicted RBP11.11□□□□□ -0.63
PYGB-201ENST00000216962 ZRSR2Q15696 482 aaKnown RBP11.11□□□□□ -0.63
PYGB-201ENST00000216962 SDR42E1Q8WUS8 393 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 PSMB7Q99436 277 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 THAP9Q9H5L6 903 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 RABEP2Q9H5N1 569 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 PDE4DIPQ5VU43 2346 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 FAM237AA0A1B0GTK4 181 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 TLDC2A0PJX2 215 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 EPHB4P54760 987 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 SLC9C1Q4G0N8 1177 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 PARP10Q53GL7 1025 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 KRT79Q5XKE5 535 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 CPXCR1Q8N123 301 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 MB21D1Q8N884 522 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 OXER1Q8TDS5 423 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 MAGEF1Q9HAY2 307 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 TMEM51Q9NW97 253 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 LIMA1Q9UHB6 759 aaKnown RBP11.11□□□□□ -0.63
PYGB-201ENST00000216962 PXDNQ92626 1479 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 SPDYE3A6NKU9 549 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 LGALS16A8MUM7 142 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 ACTN4O43707 911 aaKnown RBP11.11□□□□□ -0.63
PYGB-201ENST00000216962 PRKAB2O43741 272 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 ZMYND10O75800 440 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 CASP1P29466 404 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 FXR1P51114 621 aaKnown RBP eCLIP11.11□□□□□ -0.63
PYGB-201ENST00000216962 SLC20A2Q08357 652 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 ARL6IP4Q66PJ3 421 aaKnown RBP11.11□□□□□ -0.63
PYGB-201ENST00000216962 CABP7Q86V35 215 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 LCORLQ8N3X6 602 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 NUCKS1Q9H1E3 243 aaKnown RBP11.11□□□□□ -0.63
PYGB-201ENST00000216962 CUEDC2Q9H467 287 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 L1RE1Q9UN81 338 aa11.11□□□□□ -0.63
PYGB-201ENST00000216962 NLRP10Q86W26 655 aa11.1□□□□□ -0.63
PYGB-201ENST00000216962 COG1Q8WTW3 980 aa11.1□□□□□ -0.63
PYGB-201ENST00000216962 CCDC114Q96M63 670 aa11.1□□□□□ -0.63
PYGB-201ENST00000216962 FAM207AQ9NSI2 230 aaPredicted RBP11.1□□□□□ -0.63
PYGB-201ENST00000216962 TARSL2A2RTX5 802 aaKnown RBP11.1□□□□□ -0.63
PYGB-201ENST00000216962 B4DLN1 442 aa11.1□□□□□ -0.63
PYGB-201ENST00000216962 SASH3O75995 380 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms