RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 MAST2Q6P0Q8 1798 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 DDTLA6NHG4 134 aaPredicted RBP10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 MARCH6O60337 910 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 SMC2O95347 1197 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 GNA11P29992 359 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 TPD52L1Q16890 204 aaPredicted RBP10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 LETM2Q2VYF4 491 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 KCTD1Q719H9 257 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 NIM1KQ8IY84 436 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 GRAMD1CQ8IYS0 662 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 DHX36Q9H2U1 1008 aaKnown RBP10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 MYH6P13533 1939 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 FOXN1O15353 648 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 TXLNAP40222 546 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 IRF5Q13568 498 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 RBM26Q5T8P6 1007 aaKnown RBP10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 STAMQ92783 540 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 SMARCE1Q969G3 411 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 COA7Q96BR5 231 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 PRMT6Q96LA8 375 aaPredicted RBP10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 CSRNP1Q96S65 589 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 BIN2Q9UBW5 565 aaPredicted RBP10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 PDHBP11177 359 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 SLC1A4P43007 532 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 NLRP12P59046 1061 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 SYMPKQ92797 1274 aaKnown RBP10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 BARHL2Q9NY43 387 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 PCDHA5Q9Y5H7 936 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 WNT7AO00755 349 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 KIF1CO43896 1103 aaKnown RBP10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 CDC25AP30304 524 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 SHMT1P34896 483 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 HSP90AA4PQ58FG1 418 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 TYW1BQ6NUM6 668 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 FILIP1Q7Z7B0 1213 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 JDP2Q8WYK2 163 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 FERMT2Q96AC1 680 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 CCDC17Q96LX7 622 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 SH3GLB2Q9NR46 395 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 DONSONQ9NYP3 566 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 DDX41Q9UJV9 622 aaKnown RBP10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 SERPINA10Q9UK55 444 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 SLX4Q8IY92 1834 aa10.06□□□□□ -0.8
MTHFD1-201ENST00000216605 YDJCA8MPS7 323 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 PSMD14O00487 310 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 ADAMTS3O15072 1205 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 LMOD1P29536 600 aaPredicted RBP10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 ZNF75DP51815 510 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 SEPT2Q15019 361 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 POSTNQ15063 836 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 ZKSCAN8Q15776 578 aaPredicted RBP10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 ASPRV1Q53RT3 343 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 TTBK2Q6IQ55 1244 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 PLIN2Q99541 437 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 SPZ1Q9BXG8 430 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 PIM2Q9P1W9 311 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 HPSEQ9Y251 543 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 NAV1Q8NEY1 1877 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 STXBP3O00186 592 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 NEMFO60524 1076 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 CCNT1O60563 726 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 ICA1Q05084 483 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 GABPAQ06546 454 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 ABCB5Q2M3G0 1257 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 ICE2Q659A1 982 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 KLHL10Q6JEL2 608 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 KANK3Q6NY19 840 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 DTHD1Q6ZMT9 781 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 CREBRFQ8IUR6 639 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 FBXO41Q8TF61 875 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 C7orf43Q8WVR3 580 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 FAM198AQ9UFP1 575 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 BCS1LQ9Y276 419 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 MORC2Q9Y6X9 1032 aaPredicted RBP10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 MYH1P12882 1939 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 MYH15Q9Y2K3 1946 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 SNED1Q8TER0 1413 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 EEF2P13639 858 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 NOP2P46087 812 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 LRMPQ12912 555 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 NONOQ15233 471 aaKnown RBP eCLIP10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 METTL16Q86W50 562 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 SLC16A10Q8TF71 515 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 RSPH14Q9UHP6 348 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 PCDHA6Q9UN73 950 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 PCDHA8Q9Y5H6 950 aa10.05□□□□□ -0.8
MTHFD1-201ENST00000216605 MYO1BO43795 1136 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 SERPINC1P01008 464 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 CALRP27797 417 aaKnown RBP10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 TRAPPC10P48553 1259 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 TNNI2P48788 182 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 HDLBPQ00341 1268 aaKnown RBP10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 IQCB1Q15051 598 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 NPY5RQ15761 445 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 SHROOM1Q2M3G4 852 aaPredicted RBP10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 CEP135Q66GS9 1140 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 SLFN13Q68D06 897 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 RSBN1LQ6PCB5 846 aaPredicted RBP10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 PLA2G4DQ86XP0 818 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms