RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 SHROOM1Q2M3G4 852 aaPredicted RBP9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 DACT2Q5SW24 774 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 REXO1Q8N1G1 1221 aaKnown RBP9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 PYM1Q9BRP8 204 aaKnown RBP9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 TMEM260Q9NX78 707 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 DYNC1I1O14576 645 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 RIOK3O14730 519 aaKnown RBP9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 STRIP1Q5VSL9 837 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 STYK1Q6J9G0 422 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 CCAR2Q8N163 923 aaKnown RBP9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 TBCKQ8TEA7 893 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 CTNND2Q9UQB3 1225 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 PPP1R3GB7ZBB8 358 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 RAD21O60216 631 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 UBA7P41226 1012 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 EZH2Q15910 746 aaKnown RBP9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 NAALADL2Q58DX5 795 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 TTBK2Q6IQ55 1244 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 NEK8Q86SG6 692 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 FAM177A1Q8N128 213 aaPredicted RBP9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 ZNF592Q92610 1267 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 MYO3BQ8WXR4 1341 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 DDTLA6NHG4 134 aaPredicted RBP9.02□□□□□ -0.96
HMGXB4-201ENST00000216106 GTPBP6O43824 516 aaPredicted RBP9.02□□□□□ -0.96
HMGXB4-201ENST00000216106 SLC16A2P36021 539 aa9.02□□□□□ -0.96
HMGXB4-201ENST00000216106 ZNF543Q08ER8 600 aa9.02□□□□□ -0.96
HMGXB4-201ENST00000216106 CCDC96Q2M329 555 aa9.02□□□□□ -0.96
HMGXB4-201ENST00000216106 E4F1Q66K89 784 aaPredicted RBP9.02□□□□□ -0.96
HMGXB4-201ENST00000216106 KCTD1Q719H9 257 aa9.02□□□□□ -0.96
HMGXB4-201ENST00000216106 ZSCAN29Q8IWY8 852 aaPredicted RBP9.02□□□□□ -0.96
HMGXB4-201ENST00000216106 RGPD3A6NKT7 1758 aaPredicted RBP9.02□□□□□ -0.96
HMGXB4-201ENST00000216106 RGPD4Q7Z3J3 1758 aa9.02□□□□□ -0.96
HMGXB4-201ENST00000216106 LAD1O00515 517 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 OR52Z1P0C646 297 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 EN1Q05925 392 aaPredicted RBP9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 SPATA1Q5VX52 437 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 RRAGBQ5VZM2 374 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 ADGRF4Q8IZF3 695 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 FAM198AQ9UFP1 575 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 UTRNP46939 3433 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 NRDCO43847 1150 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 RPN1P04843 607 aaKnown RBP9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 SLC15A2Q16348 729 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 POTEDQ86YR6 584 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 JMJD4Q9H9V9 463 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 MAPK8IP1Q9UQF2 711 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 ESYT2A0FGR8 921 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 PRPHP41219 470 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 PTPN14Q15678 1187 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 CEP135Q66GS9 1140 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 NYAP1Q6ZVC0 841 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 LRRC15Q8TF66 581 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 EHD4Q9H223 541 aa9.02□□□□□ -0.97
HMGXB4-201ENST00000216106 PPP1R11O60927 126 aaPredicted RBP9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 GTF2F1P35269 517 aaKnown RBP eCLIP9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 ADCY7P51828 1080 aa9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 CNKSR1Q969H4 720 aa9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 GDAQ9Y2T3 454 aa9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 hCG_1984214I3L0E3 225 aa9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 TECP42680 631 aa9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 CT47A1Q5JQC4 288 aaPredicted RBP9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 SPECC1LQ69YQ0 1117 aa9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 SH3BP5LQ7L8J4 393 aa9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 ZNF713Q8N859 430 aaPredicted RBP9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 CCSER1Q9C0I3 900 aa9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 C10orf71Q711Q0 1435 aa9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 TEX33O43247 280 aa9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 DHX8Q14562 1220 aaKnown RBP9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 UBE2SQ16763 222 aa9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 APTXQ7Z2E3 356 aaKnown RBP9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 CABP7Q86V35 215 aa9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 PDGFDQ9GZP0 370 aaPredicted RBP9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 DHX36Q9H2U1 1008 aaKnown RBP9.01□□□□□ -0.97
HMGXB4-201ENST00000216106 PNMA6FA0A0J9YX94 578 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 A0A1B0GTH6 734 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 USP17L10C9JJH3 530 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 C21orf2O43822 256 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 PLCG1P19174 1290 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 CERKLQ49MI3 558 aaPredicted RBP9□□□□□ -0.97
HMGXB4-201ENST00000216106 ZNF658Q5TYW1 1059 aaPredicted RBP9□□□□□ -0.97
HMGXB4-201ENST00000216106 CDKAL1Q5VV42 579 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 C7orf43Q8WVR3 580 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 PPP1R13BQ96KQ4 1090 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 TRIM34Q9BYJ4 488 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 TDRD3Q9H7E2 651 aaKnown RBP9□□□□□ -0.97
HMGXB4-201ENST00000216106 RMND1Q9NWS8 449 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 PI4KBQ9UBF8 816 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 TDP2O95551 362 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 EEF2P13639 858 aaKnown RBP9□□□□□ -0.97
HMGXB4-201ENST00000216106 TNNI2P48788 182 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 ADKP55263 362 aaKnown RBP9□□□□□ -0.97
HMGXB4-201ENST00000216106 FKBP1AP62942 108 aaKnown RBP9□□□□□ -0.97
HMGXB4-201ENST00000216106 PAK1Q13153 545 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 NR1I3Q14994 352 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 GPATCH4Q5T3I0 446 aaKnown RBP9□□□□□ -0.97
HMGXB4-201ENST00000216106 CCDC112Q8NEF3 446 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 CCDC17Q96LX7 622 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 IDI2Q9BXS1 227 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 KCND1Q9NSA2 647 aa9□□□□□ -0.97
HMGXB4-201ENST00000216106 SERPINA10Q9UK55 444 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms