RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 RCSD1Q6JBY9 416 aa16.92■□□□□ 0.3
EFNB1-201ENST00000204961 FOXR1Q6PIV2 292 aa16.92■□□□□ 0.3
EFNB1-201ENST00000204961 PIGSQ96S52 555 aa16.92■□□□□ 0.3
EFNB1-201ENST00000204961 ZNF804BA4D1E1 1349 aa16.92■□□□□ 0.3
EFNB1-201ENST00000204961 POTEMA6NI47 508 aa16.92■□□□□ 0.3
EFNB1-201ENST00000204961 MYO1BO43795 1136 aa16.92■□□□□ 0.3
EFNB1-201ENST00000204961 ZRANB2O95218 330 aaKnown RBP eCLIP16.92■□□□□ 0.3
EFNB1-201ENST00000204961 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.92■□□□□ 0.3
EFNB1-201ENST00000204961 NELFCDQ8IXH7 590 aa16.92■□□□□ 0.3
EFNB1-201ENST00000204961 COL1A1P02452 1464 aaPredicted RBP16.91■□□□□ 0.3
EFNB1-201ENST00000204961 MMS19Q96T76 1030 aa16.91■□□□□ 0.3
EFNB1-201ENST00000204961 FUT8Q9BYC5 575 aa16.91■□□□□ 0.3
EFNB1-201ENST00000204961 ANKZF1Q9H8Y5 726 aa16.91■□□□□ 0.3
EFNB1-201ENST00000204961 RCCD1A6NED2 376 aa16.91■□□□□ 0.3
EFNB1-201ENST00000204961 SMCO2A6NFE2 343 aa16.91■□□□□ 0.3
EFNB1-201ENST00000204961 BUB1O43683 1085 aa16.91■□□□□ 0.3
EFNB1-201ENST00000204961 IPO7O95373 1038 aaKnown RBP16.91■□□□□ 0.3
EFNB1-201ENST00000204961 C2orf54Q08AI8 447 aa16.91■□□□□ 0.3
EFNB1-201ENST00000204961 SLC35G1Q2M3R5 365 aa16.91■□□□□ 0.3
EFNB1-201ENST00000204961 ADAM21Q9UKJ8 722 aa16.91■□□□□ 0.3
EFNB1-201ENST00000204961 MYH15Q9Y2K3 1946 aa16.91■□□□□ 0.3
EFNB1-201ENST00000204961 TRIM66O15016 1216 aa16.91■□□□□ 0.3
EFNB1-201ENST00000204961 UBE2SQ16763 222 aa16.91■□□□□ 0.3
EFNB1-201ENST00000204961 SLC30A10Q6XR72 485 aa16.91■□□□□ 0.3
EFNB1-201ENST00000204961 NOC4LQ9BVI4 516 aaKnown RBP16.91■□□□□ 0.3
EFNB1-201ENST00000204961 MYH13Q9UKX3 1938 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 COL4A1P02462 1669 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 NCK2O43639 380 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 KIF5BP33176 963 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 SF3A3Q12874 501 aaKnown RBP eCLIP16.9■□□□□ 0.3
EFNB1-201ENST00000204961 UBE4AQ14139 1066 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 PDXDC2PQ6P474 469 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 ZNF579Q8NAF0 562 aaKnown RBP16.9■□□□□ 0.3
EFNB1-201ENST00000204961 CTAGE1Q96RT6 745 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 TMEM47Q9BQJ4 181 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 RBM28Q9NW13 759 aaKnown RBP16.9■□□□□ 0.3
EFNB1-201ENST00000204961 BSDC1Q9NW68 430 aaPredicted RBP16.9■□□□□ 0.3
EFNB1-201ENST00000204961 TNS2Q63HR2 1409 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 FAM237AA0A1B0GTK4 181 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 GTPBP6O43824 516 aaPredicted RBP16.9■□□□□ 0.3
EFNB1-201ENST00000204961 NDUFA10O95299 355 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 SCNN1DP51172 638 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 CACNB3P54284 484 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 EZH2Q15910 746 aaKnown RBP16.9■□□□□ 0.3
EFNB1-201ENST00000204961 PFKFB3Q16875 520 aaPredicted RBP16.9■□□□□ 0.3
EFNB1-201ENST00000204961 CABP7Q86V35 215 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 TRIML1Q8N9V2 468 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 CDK5RAP3Q96JB5 506 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 TUBGCP2Q9BSJ2 902 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 MLXIPQ9HAP2 919 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 MYO6Q9UM54 1294 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 SLIT2O94813 1529 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 TDRD12Q587J7 1177 aaKnown RBP16.9■□□□□ 0.3
EFNB1-201ENST00000204961 HSP90B2PQ58FF3 399 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 SOGA3Q5TF21 947 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 CYP26C1Q6V0L0 522 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 C2CD5Q86YS7 1000 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 KLHL34Q8N239 644 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 DISC1Q9NRI5 854 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 TCP11L1Q9NUJ3 509 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 EXOC1Q9NV70 894 aa16.9■□□□□ 0.3
EFNB1-201ENST00000204961 KIF1AQ12756 1690 aa16.89■□□□□ 0.3
EFNB1-201ENST00000204961 GOLGA6L9A6NEM1 432 aa16.89■□□□□ 0.29
EFNB1-201ENST00000204961 CDKAL1Q5VV42 579 aa16.89■□□□□ 0.29
EFNB1-201ENST00000204961 ANKRD40Q6AI12 368 aa16.89■□□□□ 0.29
EFNB1-201ENST00000204961 POTEDQ86YR6 584 aa16.89■□□□□ 0.29
EFNB1-201ENST00000204961 DHX37Q8IY37 1157 aaKnown RBP16.89■□□□□ 0.29
EFNB1-201ENST00000204961 NOC3LQ8WTT2 800 aaKnown RBP16.89■□□□□ 0.29
EFNB1-201ENST00000204961 RSPH14Q9UHP6 348 aa16.89■□□□□ 0.29
EFNB1-201ENST00000204961 PSMA7O14818 248 aa16.89■□□□□ 0.29
EFNB1-201ENST00000204961 NT5DC1Q5TFE4 455 aa16.89■□□□□ 0.29
EFNB1-201ENST00000204961 IRF2BP1Q8IU81 584 aa16.89■□□□□ 0.29
EFNB1-201ENST00000204961 RABGGTAQ92696 567 aa16.89■□□□□ 0.29
EFNB1-201ENST00000204961 PCDHA6Q9UN73 950 aa16.89■□□□□ 0.29
EFNB1-201ENST00000204961 PCDHA8Q9Y5H6 950 aa16.89■□□□□ 0.29
EFNB1-201ENST00000204961 PHRF1Q9P1Y6 1649 aaKnown RBP16.88■□□□□ 0.29
EFNB1-201ENST00000204961 USP17L5A8MUK1 530 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 E2F4Q16254 413 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 NAALADL2Q58DX5 795 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 ZNF658Q5TYW1 1059 aaPredicted RBP16.88■□□□□ 0.29
EFNB1-201ENST00000204961 TBCKQ8TEA7 893 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 PANX2Q96RD6 677 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 LRWD1Q9UFC0 647 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 LCMT1Q9UIC8 334 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 USP54Q70EL1 1684 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 KDM4FA0A1W2PPD8 638 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 AMOTL1Q8IY63 956 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 TEX11Q8IYF3 940 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 OR8K1Q8NGG5 319 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.88■□□□□ 0.29
EFNB1-201ENST00000204961 REXO2Q9Y3B8 237 aaKnown RBP16.88■□□□□ 0.29
EFNB1-201ENST00000204961 STRCP1A6NGW2 1772 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 UFL1O94874 794 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 CYP2C19P33261 490 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 STIM1Q13586 685 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 RSRC2Q7L4I2 434 aaKnown RBP16.88■□□□□ 0.29
EFNB1-201ENST00000204961 JAKMIP2Q96AA8 810 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 CNOT6LQ96LI5 555 aaKnown RBP16.88■□□□□ 0.29
EFNB1-201ENST00000204961 EYA3Q99504 573 aa16.88■□□□□ 0.29
EFNB1-201ENST00000204961 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms