RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 KANK3Q6NY19 840 aa14.46□□□□□ -0.09
PCDHB4-201ENST00000194152 REXO1Q8N1G1 1221 aaKnown RBP14.46□□□□□ -0.09
PCDHB4-201ENST00000194152 FAN1Q9Y2M0 1017 aa14.46□□□□□ -0.09
PCDHB4-201ENST00000194152 TRIM49BA6NDI0 452 aa14.46□□□□□ -0.09
PCDHB4-201ENST00000194152 NOP2P46087 812 aaKnown RBP14.46□□□□□ -0.09
PCDHB4-201ENST00000194152 TOB1P50616 345 aaPredicted RBP14.46□□□□□ -0.09
PCDHB4-201ENST00000194152 NTRK3Q16288 839 aa14.46□□□□□ -0.09
PCDHB4-201ENST00000194152 DHX40Q8IX18 779 aaKnown RBP14.46□□□□□ -0.09
PCDHB4-201ENST00000194152 H2AFXP16104 143 aaPredicted RBP14.46□□□□□ -0.1
PCDHB4-201ENST00000194152 NFIAQ12857 509 aa14.46□□□□□ -0.1
PCDHB4-201ENST00000194152 CUL4BQ13620 913 aa14.46□□□□□ -0.1
PCDHB4-201ENST00000194152 TMEM266Q2M3C6 531 aa14.46□□□□□ -0.1
PCDHB4-201ENST00000194152 SLC30A10Q6XR72 485 aa14.46□□□□□ -0.1
PCDHB4-201ENST00000194152 DEFB132Q7Z7B7 95 aa14.46□□□□□ -0.1
PCDHB4-201ENST00000194152 PACS2Q86VP3 889 aa14.46□□□□□ -0.1
PCDHB4-201ENST00000194152 KANSL2Q9H9L4 492 aa14.46□□□□□ -0.1
PCDHB4-201ENST00000194152 SEPT11Q9NVA2 429 aaKnown RBP14.46□□□□□ -0.1
PCDHB4-201ENST00000194152 SYNRGQ9UMZ2 1314 aa14.46□□□□□ -0.1
PCDHB4-201ENST00000194152 USP17L15C9J2P7 530 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 USP17L13C9JLJ4 530 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 USP17L11C9JVI0 530 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 USP17L18D6R9N7 530 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 USP17L22D6RA61 530 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 USP17L17D6RBQ6 530 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 USP17L19D6RCP7 530 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 USP17L20D6RJB6 530 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 ERLIN1O75477 346 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 ZBTB7AO95365 584 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 PLCG2P16885 1265 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 USP17L24Q0WX57 530 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 TDRD12Q587J7 1177 aaKnown RBP14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 USP17L6PQ6QN14 398 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 NYAP1Q6ZVC0 841 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 TBCKQ8TEA7 893 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 KIFC2Q96AC6 838 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 ALDH8A1Q9H2A2 487 aaPredicted RBP14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 GUCY2CP25092 1073 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 HOXA13P31271 388 aaPredicted RBP14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 CCZ1BP86790 482 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 CCZ1P86791 482 aaPredicted RBP14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 NONOQ15233 471 aaKnown RBP eCLIP14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 PARD6BQ9BYG5 372 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 JCADQ9P266 1359 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 MYO1BO43795 1136 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 IQCB1Q15051 598 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 SNX29Q8TEQ0 813 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 BRIP1Q9BX63 1249 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 FOXP1Q9H334 677 aaPredicted RBP14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 LRWD1Q9UFC0 647 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 SERPINB13Q9UIV8 391 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 GUCA1BQ9UMX6 200 aa14.45□□□□□ -0.1
PCDHB4-201ENST00000194152 FMR1Q06787 632 aaKnown RBP eCLIP14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 ALX1Q15699 326 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 LONRF2Q1L5Z9 754 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 SHROOM1Q2M3G4 852 aaPredicted RBP14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 DNAJC21Q5F1R6 531 aaKnown RBP14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 E4F1Q66K89 784 aaPredicted RBP14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 NELFBQ8WX92 580 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 MRFAP1L1Q96HT8 127 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 CRACR2AQ9BSW2 395 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 MEIS1O00470 390 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 TROAPQ12815 778 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 ZNF569Q5MCW4 686 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 CC2D1AQ6P1N0 951 aaPredicted RBP14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 ENGASEQ8NFI3 743 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 POTEMA6NI47 508 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 GNA11P29992 359 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 CCDC40Q4G0X9 1142 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 C12orf60Q5U649 245 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 CABP7Q86V35 215 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 NLGN1Q8N2Q7 840 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 ZNF384Q8TF68 577 aa14.44□□□□□ -0.1
PCDHB4-201ENST00000194152 TEX33O43247 280 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 BBOX1O75936 387 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 SASH3O75995 380 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 MAGEA9P43362 315 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 DDR1Q08345 913 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 CAPZA3Q96KX2 299 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 PNPLA7Q6ZV29 1317 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 UTRNP46939 3433 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 ADAMTS3O15072 1205 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 PTPREP23469 700 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 FOXP4Q8IVH2 680 aaPredicted RBP14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 CERKQ8TCT0 537 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 GOLGA1Q92805 767 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 ACBD3Q9H3P7 528 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 ZNF277Q9NRM2 450 aaPredicted RBP14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 ADAMTSL3P82987 1691 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 CERKLQ49MI3 558 aaPredicted RBP14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 CCDC181Q5TID7 509 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 CACNA2D4Q7Z3S7 1137 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 COL23A1Q86Y22 540 aaPredicted RBP14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 SLF1Q9BQI6 1058 aa14.43□□□□□ -0.1
PCDHB4-201ENST00000194152 PRPF3O43395 683 aaKnown RBP14.42□□□□□ -0.1
PCDHB4-201ENST00000194152 SEPT2Q15019 361 aa14.42□□□□□ -0.1
PCDHB4-201ENST00000194152 PPP2R5AQ15172 486 aa14.42□□□□□ -0.1
PCDHB4-201ENST00000194152 PRR16Q569H4 304 aa14.42□□□□□ -0.1
PCDHB4-201ENST00000194152 MUM1L1Q5H9M0 696 aa14.42□□□□□ -0.1
PCDHB4-201ENST00000194152 NCAPH2Q6IBW4 605 aa14.42□□□□□ -0.1
PCDHB4-201ENST00000194152 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms