RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 PPP2R5AQ15172 486 aa13.78□□□□□ -0.2
LMCD1-201ENST00000157600 KRT24Q2M2I5 525 aa13.78□□□□□ -0.2
LMCD1-201ENST00000157600 SND1Q7KZF4 910 aaKnown RBP eCLIP13.78□□□□□ -0.2
LMCD1-201ENST00000157600 NCAPGQ9BPX3 1015 aa13.78□□□□□ -0.2
LMCD1-201ENST00000157600 USP44Q9H0E7 712 aa13.78□□□□□ -0.2
LMCD1-201ENST00000157600 CUL4BQ13620 913 aa13.78□□□□□ -0.2
LMCD1-201ENST00000157600 TRIM42Q8IWZ5 723 aa13.78□□□□□ -0.2
LMCD1-201ENST00000157600 CA8P35219 290 aa13.78□□□□□ -0.2
LMCD1-201ENST00000157600 SEMA3FQ13275 785 aa13.78□□□□□ -0.2
LMCD1-201ENST00000157600 STK32BQ9NY57 414 aa13.78□□□□□ -0.2
LMCD1-201ENST00000157600 TAB2Q9NYJ8 693 aa13.78□□□□□ -0.2
LMCD1-201ENST00000157600 TYW1BQ6NUM6 668 aa13.78□□□□□ -0.2
LMCD1-201ENST00000157600 NLRP1Q9C000 1473 aa13.77□□□□□ -0.2
LMCD1-201ENST00000157600 KRIT1O00522 736 aa13.77□□□□□ -0.2
LMCD1-201ENST00000157600 NR1I2O75469 434 aa13.77□□□□□ -0.2
LMCD1-201ENST00000157600 OAS2P29728 719 aaKnown RBP13.77□□□□□ -0.2
LMCD1-201ENST00000157600 STX2P32856 288 aa13.77□□□□□ -0.2
LMCD1-201ENST00000157600 TFAP4Q01664 338 aa13.77□□□□□ -0.2
LMCD1-201ENST00000157600 RAB20Q9NX57 234 aa13.77□□□□□ -0.2
LMCD1-201ENST00000157600 STK17AQ9UEE5 414 aa13.77□□□□□ -0.2
LMCD1-201ENST00000157600 ITSN1Q15811 1721 aa13.77□□□□□ -0.2
LMCD1-201ENST00000157600 MFSD14BQ5SR56 506 aa13.77□□□□□ -0.2
LMCD1-201ENST00000157600 GPBP1Q86WP2 473 aa13.77□□□□□ -0.2
LMCD1-201ENST00000157600 NIM1KQ8IY84 436 aa13.77□□□□□ -0.2
LMCD1-201ENST00000157600 BEND3Q5T5X7 828 aa13.77□□□□□ -0.21
LMCD1-201ENST00000157600 IFNL3Q8IZI9 196 aa13.77□□□□□ -0.21
LMCD1-201ENST00000157600 HSPD1P10809 573 aaKnown RBP13.77□□□□□ -0.21
LMCD1-201ENST00000157600 TNNI1P19237 187 aa13.77□□□□□ -0.21
LMCD1-201ENST00000157600 FAM178BQ8IXR5 827 aa13.77□□□□□ -0.21
LMCD1-201ENST00000157600 DDX25Q9UHL0 483 aaKnown RBP13.77□□□□□ -0.21
LMCD1-201ENST00000157600 RNF17Q9BXT8 1623 aaKnown RBP13.77□□□□□ -0.21
LMCD1-201ENST00000157600 CARMIL3Q8ND23 1372 aa13.77□□□□□ -0.21
LMCD1-201ENST00000157600 ALCAMQ13740 583 aa13.77□□□□□ -0.21
LMCD1-201ENST00000157600 VPS54Q9P1Q0 977 aa13.77□□□□□ -0.21
LMCD1-201ENST00000157600 JRKLQ9Y4A0 524 aa13.77□□□□□ -0.21
LMCD1-201ENST00000157600 UNC13BO14795 1591 aa13.77□□□□□ -0.21
LMCD1-201ENST00000157600 STAM2O75886 525 aa13.77□□□□□ -0.21
LMCD1-201ENST00000157600 ZNF710Q8N1W2 664 aa13.77□□□□□ -0.21
LMCD1-201ENST00000157600 ZFP91Q96JP5 570 aaPredicted RBP13.77□□□□□ -0.21
LMCD1-201ENST00000157600 ATP2B4P23634 1241 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 RINT1Q6NUQ1 792 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 ZNF853P0CG23 659 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 PDE6AP16499 860 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 LONRF2Q1L5Z9 754 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 SLF1Q9BQI6 1058 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 RIMBP2O15034 1052 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 HSPA8P11142 646 aaKnown RBP13.76□□□□□ -0.21
LMCD1-201ENST00000157600 PNOCQ13519 176 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 CDC37Q16543 378 aaPredicted RBP13.76□□□□□ -0.21
LMCD1-201ENST00000157600 DEPTORQ8TB45 409 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 FAM207AQ9NSI2 230 aaPredicted RBP13.76□□□□□ -0.21
LMCD1-201ENST00000157600 MAP2P11137 1827 aaKnown RBP13.76□□□□□ -0.21
LMCD1-201ENST00000157600 ARAP3Q8WWN8 1544 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
LMCD1-201ENST00000157600 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 OTUD7AQ8TE49 926 aaPredicted RBP13.76□□□□□ -0.21
LMCD1-201ENST00000157600 PPP2R2CQ9Y2T4 447 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 A2ML1A8K2U0 1454 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 TNNC2P02585 160 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 RPN1P04843 607 aaKnown RBP13.76□□□□□ -0.21
LMCD1-201ENST00000157600 TMOD1P28289 359 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 ZAP70P43403 619 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 CCDC170Q8IYT3 715 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 LSM14BQ9BX40 385 aaKnown RBP13.76□□□□□ -0.21
LMCD1-201ENST00000157600 PANK4Q9NVE7 773 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 THEGQ9P2T0 379 aa13.76□□□□□ -0.21
LMCD1-201ENST00000157600 CASC4Q6P4E1 433 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 PNMA1Q8ND90 353 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 ADPGKQ9BRR6 497 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 HIP1RO75146 1068 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 CPA1P15085 419 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 NACA2Q9H009 215 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 MAPK8IP1Q9UQF2 711 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 MIER3Q7Z3K6 550 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 CDHR1Q96JP9 859 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 CNOT10Q9H9A5 744 aaKnown RBP13.75□□□□□ -0.21
LMCD1-201ENST00000157600 CPSF1Q10570 1443 aaKnown RBP13.75□□□□□ -0.21
LMCD1-201ENST00000157600 CEP120Q8N960 986 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 CDKL2Q92772 493 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 POLR2MP0CAP2 368 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 MAP7D3Q8IWC1 876 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 TMEM63CQ9P1W3 806 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 SLC39A14Q15043 492 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 PALM2Q8IXS6 379 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 FNBP4Q8N3X1 1017 aaPredicted RBP13.75□□□□□ -0.21
LMCD1-201ENST00000157600 TDRD7Q8NHU6 1098 aaKnown RBP13.75□□□□□ -0.21
LMCD1-201ENST00000157600 MTMR6Q9Y217 621 aa13.75□□□□□ -0.21
LMCD1-201ENST00000157600 EPN1Q9Y6I3 576 aaPredicted RBP13.75□□□□□ -0.21
LMCD1-201ENST00000157600 KRT81Q14533 505 aa13.74□□□□□ -0.21
LMCD1-201ENST00000157600 LARGE2Q8N3Y3 721 aa13.74□□□□□ -0.21
LMCD1-201ENST00000157600 ZNF496Q96IT1 587 aaPredicted RBP13.74□□□□□ -0.21
LMCD1-201ENST00000157600 ZSCAN26Q16670 478 aa13.74□□□□□ -0.21
LMCD1-201ENST00000157600 ARHGEF37A1IGU5 675 aa13.74□□□□□ -0.21
LMCD1-201ENST00000157600 PSMD2Q13200 908 aa13.74□□□□□ -0.21
LMCD1-201ENST00000157600 TRIM50Q86XT4 487 aa13.74□□□□□ -0.21
LMCD1-201ENST00000157600 MAP4K1Q92918 833 aa13.74□□□□□ -0.21
LMCD1-201ENST00000157600 RFX7Q2KHR2 1363 aa13.74□□□□□ -0.21
LMCD1-201ENST00000157600 XPOTO43592 962 aaKnown RBP13.74□□□□□ -0.21
LMCD1-201ENST00000157600 U2AF2P26368 475 aaKnown RBP eCLIP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms