RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 LRRC45Q96CN5 670 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 CLIC6Q96NY7 704 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 PPP1R9BQ96SB3 815 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 TAB2Q9NYJ8 693 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 NUB1Q9Y5A7 615 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 LMTK2Q8IWU2 1503 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 YARSP54577 528 aaKnown RBP12.65□□□□□ -0.38
PKP2-201ENST00000070846 KARSQ15046 597 aaKnown RBP12.65□□□□□ -0.38
PKP2-201ENST00000070846 HOXC10Q9NYD6 342 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 IKBKGQ9Y6K9 419 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 NR1I2O75469 434 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 FOXO4P98177 505 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 UBE2SQ16763 222 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 GJA10Q969M2 543 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 RIPOR2Q9Y4F9 1068 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 COL4A3BPQ9Y5P4 624 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 MROH7-TTC4A0A0A0MT08 1334 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 IQSEC2Q5JU85 1478 aa12.65□□□□□ -0.38
PKP2-201ENST00000070846 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
PKP2-201ENST00000070846 GADD45BO75293 160 aaPredicted RBP12.64□□□□□ -0.39
PKP2-201ENST00000070846 DLATP10515 647 aaKnown RBP12.64□□□□□ -0.39
PKP2-201ENST00000070846 ARHGAP44Q17R89 818 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 RSPH3Q86UC2 560 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 CNGA4Q8IV77 575 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 TTC14Q96N46 770 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 ANKFY1Q9P2R3 1169 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 RABGAP1Q9Y3P9 1069 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 PFKFB1P16118 471 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 IFNAR1P17181 557 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 CDC25AP30304 524 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 TERF1P54274 439 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 ADALQ6DHV7 355 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 LEKR1Q6ZMV7 388 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 COL23A1Q86Y22 540 aaPredicted RBP12.64□□□□□ -0.39
PKP2-201ENST00000070846 FMNL3Q8IVF7 1028 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 SRRTQ9BXP5 876 aaKnown RBP12.64□□□□□ -0.39
PKP2-201ENST00000070846 MTMR6Q9Y217 621 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 USP42Q9H9J4 1324 aaKnown RBP12.64□□□□□ -0.39
PKP2-201ENST00000070846 PLEKHG2Q9H7P9 1386 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 SPOPO43791 374 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 ABL1P00519 1130 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 ZNF827Q17R98 1081 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 PDXDC2PQ6P474 469 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 RNF207Q6ZRF8 634 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 MYOCDQ8IZQ8 938 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 CEP170P1Q96L14 293 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 SSX2IPQ9Y2D8 614 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 UNC13BO14795 1591 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 SPHKAPQ2M3C7 1700 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 F5H6K3 240 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 LIFRP42702 1097 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 KLRC3Q07444 240 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 NFX1Q12986 1120 aaKnown RBP12.64□□□□□ -0.39
PKP2-201ENST00000070846 DMP1Q13316 513 aaPredicted RBP12.64□□□□□ -0.39
PKP2-201ENST00000070846 FAM26FQ5R3K3 315 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 STRIP1Q5VSL9 837 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 MTERF4Q7Z6M4 381 aaKnown RBP12.64□□□□□ -0.39
PKP2-201ENST00000070846 MMS19Q96T76 1030 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 RAVER2Q9HCJ3 691 aaKnown RBP12.64□□□□□ -0.39
PKP2-201ENST00000070846 NLRC4Q9NPP4 1024 aa12.64□□□□□ -0.39
PKP2-201ENST00000070846 CD163L1Q9NR16 1453 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 HNRNPDLO14979 420 aaKnown RBP12.63□□□□□ -0.39
PKP2-201ENST00000070846 PNOCQ13519 176 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 NELFBQ8WX92 580 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 CEP95Q96GE4 821 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 AIFM3Q96NN9 605 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 RPS6KC1Q96S38 1066 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 TMEM47Q9BQJ4 181 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 WDR11Q9BZH6 1224 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 CLSTN2Q9H4D0 955 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 SH2B2O14492 632 aaPredicted RBP12.63□□□□□ -0.39
PKP2-201ENST00000070846 BRD1O95696 1058 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 ARL1P40616 181 aaPredicted RBP12.63□□□□□ -0.39
PKP2-201ENST00000070846 SNRNP48Q6IEG0 339 aaKnown RBP12.63□□□□□ -0.39
PKP2-201ENST00000070846 ARMCX5Q6P1M9 558 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 DCUN1D2Q6PH85 259 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.63□□□□□ -0.39
PKP2-201ENST00000070846 FAM207AQ9NSI2 230 aaPredicted RBP12.63□□□□□ -0.39
PKP2-201ENST00000070846 GGA3Q9NZ52 723 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 PCDHA4Q9UN74 947 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 UTYO14607 1347 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 ANGEL2Q5VTE6 544 aaKnown RBP12.63□□□□□ -0.39
PKP2-201ENST00000070846 RMDN3Q96TC7 470 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 MXD3Q9BW11 206 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 SLC39A2Q9NP94 309 aa12.63□□□□□ -0.39
PKP2-201ENST00000070846 TMEM191BP0C7N4 346 aa12.62□□□□□ -0.39
PKP2-201ENST00000070846 HMGCS2P54868 508 aa12.62□□□□□ -0.39
PKP2-201ENST00000070846 PPP1R16BQ96T49 567 aa12.62□□□□□ -0.39
PKP2-201ENST00000070846 UBN2Q6ZU65 1347 aa12.62□□□□□ -0.39
PKP2-201ENST00000070846 AKR1B15C9JRZ8 316 aaPredicted RBP12.62□□□□□ -0.39
PKP2-201ENST00000070846 MARK3P27448 753 aa12.62□□□□□ -0.39
PKP2-201ENST00000070846 FAM49AQ9H0Q0 323 aaPredicted RBP12.62□□□□□ -0.39
PKP2-201ENST00000070846 ARMCX3Q9UH62 379 aaPredicted RBP12.62□□□□□ -0.39
PKP2-201ENST00000070846 NMT2O60551 498 aa12.62□□□□□ -0.39
PKP2-201ENST00000070846 XRCC5P13010 732 aaKnown RBP12.62□□□□□ -0.39
PKP2-201ENST00000070846 MCM3P25205 808 aa12.62□□□□□ -0.39
PKP2-201ENST00000070846 GMPSP49915 693 aaPredicted RBP12.62□□□□□ -0.39
PKP2-201ENST00000070846 BMS1Q14692 1282 aaKnown RBP12.62□□□□□ -0.39
PKP2-201ENST00000070846 MTERF2Q49AM1 385 aa12.62□□□□□ -0.39
PKP2-201ENST00000070846 SAMD7Q7Z3H4 446 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms