RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 PUM3Q15397 648 aaKnown RBP22.41■■□□□ 1.18
PPP1R3F-201ENST00000055335 CT47A1Q5JQC4 288 aaPredicted RBP22.41■■□□□ 1.18
PPP1R3F-201ENST00000055335 FAM47AQ5JRC9 791 aa22.41■■□□□ 1.18
PPP1R3F-201ENST00000055335 MS4A14Q96JA4 679 aa22.41■■□□□ 1.18
PPP1R3F-201ENST00000055335 MMRN2Q9H8L6 949 aa22.41■■□□□ 1.18
PPP1R3F-201ENST00000055335 CAPN11Q9UMQ6 739 aa22.41■■□□□ 1.18
PPP1R3F-201ENST00000055335 C4AP0C0L4 1744 aa22.41■■□□□ 1.18
PPP1R3F-201ENST00000055335 C4BP0C0L5 1744 aa22.41■■□□□ 1.18
PPP1R3F-201ENST00000055335 TARSL2A2RTX5 802 aaKnown RBP22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 ZSCAN5CA6NGD5 496 aaPredicted RBP22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 ATP2C2O75185 946 aa22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 FECHP22830 423 aa22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 HPDP32754 393 aaPredicted RBP22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 SF3A3Q12874 501 aaKnown RBP eCLIP22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 SPATA4Q8NEY3 305 aa22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 GEMIN8Q9NWZ8 242 aaKnown RBP22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 NUTM2BA6NNL0 878 aaPredicted RBP22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 NUTM2EB1AL46 878 aaPredicted RBP22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 NKRFO15226 690 aaKnown RBP eCLIP22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 OPA1O60313 960 aa22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 SLC5A1P13866 664 aa22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 RPGRIP1Q96KN7 1286 aa22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 EXOC1Q9NV70 894 aa22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 USO1O60763 962 aaKnown RBP22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 SSBP05455 408 aaKnown RBP eCLIP22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 MAP2K2P36507 400 aa22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 ATP2C1P98194 919 aaPredicted RBP22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 ALX1Q15699 326 aa22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 LPIN2Q92539 896 aa22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 FBXO3Q9UK99 471 aa22.4■■□□□ 1.18
PPP1R3F-201ENST00000055335 PTPROQ16827 1216 aa22.39■■□□□ 1.18
PPP1R3F-201ENST00000055335 C8orf74Q6P047 294 aa22.39■■□□□ 1.18
PPP1R3F-201ENST00000055335 IQCA1Q86XH1 822 aa22.39■■□□□ 1.18
PPP1R3F-201ENST00000055335 DNAJC7Q99615 494 aa22.39■■□□□ 1.18
PPP1R3F-201ENST00000055335 ASAP1Q9ULH1 1129 aa22.39■■□□□ 1.18
PPP1R3F-201ENST00000055335 BMP15O95972 392 aa22.39■■□□□ 1.17
PPP1R3F-201ENST00000055335 EVX2Q03828 476 aa22.39■■□□□ 1.17
PPP1R3F-201ENST00000055335 CCDC43Q96MW1 224 aaKnown RBP22.39■■□□□ 1.17
PPP1R3F-201ENST00000055335 ZSCAN10Q96SZ4 725 aaPredicted RBP22.39■■□□□ 1.17
PPP1R3F-201ENST00000055335 YY1AP1Q9H869 796 aa22.39■■□□□ 1.17
PPP1R3F-201ENST00000055335 PAFAH1B1P43034 410 aa22.38■■□□□ 1.17
PPP1R3F-201ENST00000055335 SEC24CP53992 1094 aa22.38■■□□□ 1.17
PPP1R3F-201ENST00000055335 NNTQ13423 1086 aa22.38■■□□□ 1.17
PPP1R3F-201ENST00000055335 ARFGEF2Q9Y6D5 1785 aa22.38■■□□□ 1.17
PPP1R3F-201ENST00000055335 RIC1Q4ADV7 1423 aa22.38■■□□□ 1.17
PPP1R3F-201ENST00000055335 DNM2P50570 870 aa22.38■■□□□ 1.17
PPP1R3F-201ENST00000055335 NFU1Q9UMS0 254 aa22.38■■□□□ 1.17
PPP1R3F-201ENST00000055335 TTMPQ5BVD1 217 aa22.38■■□□□ 1.17
PPP1R3F-201ENST00000055335 NLRP10Q86W26 655 aa22.38■■□□□ 1.17
PPP1R3F-201ENST00000055335 AMOTL1Q8IY63 956 aa22.38■■□□□ 1.17
PPP1R3F-201ENST00000055335 ABCC12Q96J65 1359 aa22.38■■□□□ 1.17
PPP1R3F-201ENST00000055335 TMC4Q7Z404 712 aa22.37■■□□□ 1.17
PPP1R3F-201ENST00000055335 CREG2Q8IUH2 290 aa22.37■■□□□ 1.17
PPP1R3F-201ENST00000055335 AENQ8WTP8 325 aaKnown RBP22.37■■□□□ 1.17
PPP1R3F-201ENST00000055335 SNX12Q9UMY4 172 aa22.37■■□□□ 1.17
PPP1R3F-201ENST00000055335 WDR17Q8IZU2 1322 aa22.37■■□□□ 1.17
PPP1R3F-201ENST00000055335 DYNLL1P63167 89 aaKnown RBP22.37■■□□□ 1.17
PPP1R3F-201ENST00000055335 KCNV1Q6PIU1 500 aa22.37■■□□□ 1.17
PPP1R3F-201ENST00000055335 MAATS1Q7Z4T9 603 aa22.37■■□□□ 1.17
PPP1R3F-201ENST00000055335 ADSSL1Q8N142 457 aa22.37■■□□□ 1.17
PPP1R3F-201ENST00000055335 CNOT6LQ96LI5 555 aaKnown RBP22.37■■□□□ 1.17
PPP1R3F-201ENST00000055335 TDRD12Q587J7 1177 aaKnown RBP22.37■■□□□ 1.17
PPP1R3F-201ENST00000055335 CFAP58Q5T655 872 aa22.37■■□□□ 1.17
PPP1R3F-201ENST00000055335 ADGRA1Q86SQ6 560 aa22.37■■□□□ 1.17
PPP1R3F-201ENST00000055335 ZIM3Q96PE6 472 aa22.37■■□□□ 1.17
PPP1R3F-201ENST00000055335 TANGO6Q9C0B7 1094 aa22.36■■□□□ 1.17
PPP1R3F-201ENST00000055335 BCCIPQ9P287 314 aaKnown RBP eCLIP22.36■■□□□ 1.17
PPP1R3F-201ENST00000055335 GOLGA8KD6RF30 607 aa22.36■■□□□ 1.17
PPP1R3F-201ENST00000055335 ZNF263O14978 683 aa22.36■■□□□ 1.17
PPP1R3F-201ENST00000055335 GUCY2DQ02846 1103 aa22.36■■□□□ 1.17
PPP1R3F-201ENST00000055335 PDE4DQ08499 809 aa22.36■■□□□ 1.17
PPP1R3F-201ENST00000055335 SRBD1Q8N5C6 995 aaKnown RBP22.36■■□□□ 1.17
PPP1R3F-201ENST00000055335 PPANQ9NQ55 473 aaKnown RBP22.36■■□□□ 1.17
PPP1R3F-201ENST00000055335 TMOD3Q9NYL9 352 aa22.36■■□□□ 1.17
PPP1R3F-201ENST00000055335 ARHGAP23Q9P227 1491 aa22.36■■□□□ 1.17
PPP1R3F-201ENST00000055335 BACH1O14867 736 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 PRPF3O43395 683 aaKnown RBP22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 ASIC1P78348 528 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 OSBPL9Q96SU4 736 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 GRIN2DO15399 1336 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 SHOX2O60902 331 aaPredicted RBP22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 ARID4AP29374 1257 aaPredicted RBP22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 USP8P40818 1118 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 VAV2P52735 878 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 ARID5AQ03989 594 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 IFT88Q13099 833 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 DTHD1Q6ZMT9 781 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 VGLL2Q8N8G2 317 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 EPB41L5Q9HCM4 733 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 CD248Q9HCU0 757 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 RBM12Q9NTZ6 932 aaKnown RBP22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 SPATA31A3Q5VYP0 1347 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 RTL9Q8NET4 1388 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 EIF4A3P38919 411 aaKnown RBP22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 RASSF7Q02833 373 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 RRAGAQ7L523 313 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 PROCA1Q8NCQ7 364 aaPredicted RBP22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 TRIM58Q8NG06 486 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 PRDM11Q9NQV5 511 aa22.35■■□□□ 1.17
PPP1R3F-201ENST00000055335 STIM2Q9P246 746 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms