RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 CCDC87Q9NVE4 849 aa22.73■■□□□ 1.23
RCN1-201ENST00000054950 MACROD2A1Z1Q3 448 aa22.73■■□□□ 1.23
RCN1-201ENST00000054950 TSPY2A6NKD2 308 aa22.73■■□□□ 1.23
RCN1-201ENST00000054950 LONP1P36776 959 aaKnown RBP22.73■■□□□ 1.23
RCN1-201ENST00000054950 TRAPPC10P48553 1259 aa22.73■■□□□ 1.23
RCN1-201ENST00000054950 PDS5AQ29RF7 1337 aaKnown RBP22.73■■□□□ 1.23
RCN1-201ENST00000054950 FAM84BQ96KN1 310 aaPredicted RBP22.73■■□□□ 1.23
RCN1-201ENST00000054950 CAPN11Q9UMQ6 739 aa22.73■■□□□ 1.23
RCN1-201ENST00000054950 ATP6V1AP38606 617 aa22.72■■□□□ 1.23
RCN1-201ENST00000054950 MRPS25P82663 173 aaKnown RBP22.72■■□□□ 1.23
RCN1-201ENST00000054950 MECOMQ03112 1051 aa22.72■■□□□ 1.23
RCN1-201ENST00000054950 INF2Q27J81 1249 aa22.72■■□□□ 1.23
RCN1-201ENST00000054950 RCSD1Q6JBY9 416 aa22.72■■□□□ 1.23
RCN1-201ENST00000054950 SMCR8Q8TEV9 937 aaPredicted RBP22.72■■□□□ 1.23
RCN1-201ENST00000054950 LRRC31Q6UY01 552 aa22.72■■□□□ 1.23
RCN1-201ENST00000054950 MSL3Q8N5Y2 521 aaKnown RBP22.72■■□□□ 1.23
RCN1-201ENST00000054950 RASSF4Q9H2L5 321 aa22.72■■□□□ 1.23
RCN1-201ENST00000054950 TRIM21P19474 475 aaKnown RBP22.71■■□□□ 1.23
RCN1-201ENST00000054950 TUBB4BP68371 445 aa22.71■■□□□ 1.23
RCN1-201ENST00000054950 C2orf54Q08AI8 447 aa22.71■■□□□ 1.23
RCN1-201ENST00000054950 NSUN4Q96CB9 384 aaKnown RBP22.71■■□□□ 1.23
RCN1-201ENST00000054950 PRDX5P30044 214 aa22.71■■□□□ 1.23
RCN1-201ENST00000054950 TSR1Q2NL82 804 aaKnown RBP22.71■■□□□ 1.23
RCN1-201ENST00000054950 TTI2Q6NXR4 508 aa22.71■■□□□ 1.23
RCN1-201ENST00000054950 HPS3Q969F9 1004 aa22.71■■□□□ 1.23
RCN1-201ENST00000054950 DUSP9Q99956 384 aaKnown RBP22.71■■□□□ 1.23
RCN1-201ENST00000054950 TUBGCP2Q9BSJ2 902 aa22.71■■□□□ 1.23
RCN1-201ENST00000054950 TFCP2L1Q9NZI6 479 aa22.71■■□□□ 1.23
RCN1-201ENST00000054950 HPCAL4Q9UM19 191 aa22.71■■□□□ 1.23
RCN1-201ENST00000054950 PLEKP08567 350 aaPredicted RBP22.7■■□□□ 1.22
RCN1-201ENST00000054950 SLC20A2Q08357 652 aa22.7■■□□□ 1.22
RCN1-201ENST00000054950 ERFEQ4G0M1 354 aa22.7■■□□□ 1.22
RCN1-201ENST00000054950 ARL6IP4Q66PJ3 421 aaKnown RBP22.7■■□□□ 1.22
RCN1-201ENST00000054950 DTHD1Q6ZMT9 781 aa22.7■■□□□ 1.22
RCN1-201ENST00000054950 KRT26Q7Z3Y9 468 aa22.7■■□□□ 1.22
RCN1-201ENST00000054950 CAGE1Q8TC20 777 aa22.7■■□□□ 1.22
RCN1-201ENST00000054950 PCMTD1Q96MG8 357 aaPredicted RBP22.7■■□□□ 1.22
RCN1-201ENST00000054950 NHEJ1Q9H9Q4 299 aaPredicted RBP22.7■■□□□ 1.22
RCN1-201ENST00000054950 RSPH14Q9UHP6 348 aa22.7■■□□□ 1.22
RCN1-201ENST00000054950 ZC3H4Q9UPT8 1303 aaKnown RBP22.7■■□□□ 1.22
RCN1-201ENST00000054950 ITPK1Q13572 414 aa22.7■■□□□ 1.22
RCN1-201ENST00000054950 SLC35G1Q2M3R5 365 aa22.7■■□□□ 1.22
RCN1-201ENST00000054950 CAVIN4Q5BKX8 364 aa22.7■■□□□ 1.22
RCN1-201ENST00000054950 ANKRD18AQ8IVF6 992 aa22.7■■□□□ 1.22
RCN1-201ENST00000054950 CSGALNACT2Q8N6G5 542 aa22.7■■□□□ 1.22
RCN1-201ENST00000054950 EXOC5O00471 708 aa22.69■■□□□ 1.22
RCN1-201ENST00000054950 USP17L8P0C7I0 530 aa22.69■■□□□ 1.22
RCN1-201ENST00000054950 PAPD7Q5XG87 772 aaKnown RBP22.69■■□□□ 1.22
RCN1-201ENST00000054950 SMIM5Q71RC9 77 aa22.69■■□□□ 1.22
RCN1-201ENST00000054950 PYM1Q9BRP8 204 aaKnown RBP22.69■■□□□ 1.22
RCN1-201ENST00000054950 TTYH3Q9C0H2 523 aa22.69■■□□□ 1.22
RCN1-201ENST00000054950 CPVLQ9H3G5 476 aa22.69■■□□□ 1.22
RCN1-201ENST00000054950 MAGEC2Q9UBF1 373 aaPredicted RBP22.69■■□□□ 1.22
RCN1-201ENST00000054950 A0A1W2PQC6 194 aa22.69■■□□□ 1.22
RCN1-201ENST00000054950 UBA7P41226 1012 aa22.69■■□□□ 1.22
RCN1-201ENST00000054950 PARP10Q53GL7 1025 aa22.69■■□□□ 1.22
RCN1-201ENST00000054950 CELF1Q92879 486 aaKnown RBP22.69■■□□□ 1.22
RCN1-201ENST00000054950 DRC1Q96MC2 740 aa22.69■■□□□ 1.22
RCN1-201ENST00000054950 PCDHA4Q9UN74 947 aa22.69■■□□□ 1.22
RCN1-201ENST00000054950 CCDC194A0A1B0GVG4 234 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 PSMA7O14818 248 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 ORC4O43929 436 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 PRPF6O94906 941 aaKnown RBP22.68■■□□□ 1.22
RCN1-201ENST00000054950 FCER1AP12319 257 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 EEF1GP26641 437 aaKnown RBP22.68■■□□□ 1.22
RCN1-201ENST00000054950 CCDC178Q5BJE1 867 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 DYNLL2Q96FJ2 89 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 TSPYL1Q9H0U9 437 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 JADE2Q9NQC1 790 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 EXOC1Q9NV70 894 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 MINPP1Q9UNW1 487 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 MYH14Q7Z406 1995 aaKnown RBP22.68■■□□□ 1.22
RCN1-201ENST00000054950 SRGNP10124 158 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 TBC1D8BQ0IIM8 1120 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 EZH2Q15910 746 aaKnown RBP22.68■■□□□ 1.22
RCN1-201ENST00000054950 GIMAP8Q8ND71 665 aaPredicted RBP22.68■■□□□ 1.22
RCN1-201ENST00000054950 THAP9Q9H5L6 903 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 MED4Q9NPJ6 270 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 IL17RBQ9NRM6 502 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 PCDHA6Q9UN73 950 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 PCDHA8Q9Y5H6 950 aa22.68■■□□□ 1.22
RCN1-201ENST00000054950 ZNF263O14978 683 aa22.67■■□□□ 1.22
RCN1-201ENST00000054950 IDEP14735 1019 aa22.67■■□□□ 1.22
RCN1-201ENST00000054950 ERCC3P19447 782 aa22.67■■□□□ 1.22
RCN1-201ENST00000054950 GGCXP38435 758 aa22.67■■□□□ 1.22
RCN1-201ENST00000054950 MEA1Q16626 185 aa22.67■■□□□ 1.22
RCN1-201ENST00000054950 ANKRD40Q6AI12 368 aa22.67■■□□□ 1.22
RCN1-201ENST00000054950 CNOT6LQ96LI5 555 aaKnown RBP22.67■■□□□ 1.22
RCN1-201ENST00000054950 KRT86O43790 486 aa22.67■■□□□ 1.22
RCN1-201ENST00000054950 DNM2P50570 870 aa22.67■■□□□ 1.22
RCN1-201ENST00000054950 STK4Q13043 487 aa22.67■■□□□ 1.22
RCN1-201ENST00000054950 BICDL1Q6ZP65 573 aa22.67■■□□□ 1.22
RCN1-201ENST00000054950 HEATR3Q7Z4Q2 680 aa22.67■■□□□ 1.22
RCN1-201ENST00000054950 PSMB7Q99436 277 aa22.67■■□□□ 1.22
RCN1-201ENST00000054950 KAT14Q9H8E8 782 aa22.67■■□□□ 1.22
RCN1-201ENST00000054950 RHOBTB3O94955 611 aa22.66■■□□□ 1.22
RCN1-201ENST00000054950 IVLP07476 585 aa22.66■■□□□ 1.22
RCN1-201ENST00000054950 PLCG1P19174 1290 aa22.66■■□□□ 1.22
RCN1-201ENST00000054950 TFAP4Q01664 338 aa22.66■■□□□ 1.22
RCN1-201ENST00000054950 AFAP1L1Q8TED9 768 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms