RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 SEPT14Q6ZU15 432 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 DGKHQ86XP1 1220 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 RETREG2Q8NC44 543 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 STRBPQ96SI9 672 aaKnown RBP11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 RGS12O14924 1447 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 GH2P01242 217 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 PRDX5P30044 214 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 IGBP1P78318 339 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 SEL1L2Q5TEA6 688 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 SUGT1Q9Y2Z0 365 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 NRXN1Q9ULB1 1477 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 SH2B2O14492 632 aaPredicted RBP11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 FBXO18Q8NFZ0 1043 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 DCAF4Q8WV16 495 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 ZSWIM4Q9H7M6 989 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 CGNQ9P2M7 1197 aaKnown RBP11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 PRKAG2Q9UGJ0 569 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 ZHX1Q9UKY1 873 aaPredicted RBP11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 TNNC2P02585 160 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 MRPS9P82933 396 aaKnown RBP11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 STAMQ92783 540 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 WRNIP1Q96S55 665 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 MAGEF1Q9HAY2 307 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 MROH7-TTC4A0A0A0MT08 1334 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 BRD1O95696 1058 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 SLC9C1Q4G0N8 1177 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 CEP112Q8N8E3 955 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 IQCDQ96DY2 449 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 BAG1Q99933 345 aaPredicted RBP11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 PANK4Q9NVE7 773 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 HOXC10Q9NYD6 342 aa11.48□□□□□ -0.57
NIPAL3-201ENST00000003912 USP17L5A8MUK1 530 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 SPOPO43791 374 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 CHRNA5P30532 468 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 SLC7A3Q8WY07 619 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 PSMD1Q99460 953 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 RTEL1Q9NZ71 1219 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 FBXO40Q9UH90 709 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 CYP2D7A0A087X1C5 515 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 LRRIQ4A6NIV6 560 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 LIFRP42702 1097 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 CACNB3P54284 484 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 PTGDRQ13258 359 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 CDC37Q16543 378 aaPredicted RBP11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 LINC00116Q8NCU8 138 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 ZNRF3Q9ULT6 936 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 AGTPBP1Q9UPW5 1226 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 NFE2L3Q9Y4A8 694 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 PFKFB1P16118 471 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 PRR5LQ6MZQ0 368 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 USP17L2Q6R6M4 530 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 ZSWIM5Q9P217 1185 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 SEPT9Q9UHD8 586 aaPredicted RBP11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 SETD1BQ9UPS6 1966 aaKnown RBP11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 PNMA6FA0A0J9YX94 578 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 N4BP1O75113 896 aaKnown RBP11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 GAS8O95995 478 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 RFX1P22670 979 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 ADCK5Q3MIX3 580 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 PLA2G12BQ9BX93 195 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 CSRNP2Q9H175 543 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 NUCKS1Q9H1E3 243 aaKnown RBP11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 ZNF215Q9UL58 517 aaPredicted RBP11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 CNTNAP4Q9C0A0 1308 aa11.47□□□□□ -0.57
NIPAL3-201ENST00000003912 SHTN1A0MZ66 631 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 UBXN2AP68543 259 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 CCDC122Q5T0U0 273 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 RASEFQ8IZ41 740 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 USP28Q96RU2 1077 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 SRRTQ9BXP5 876 aaKnown RBP11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 ZHX2Q9Y6X8 837 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 A0A0G2JLW4 131 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 XRCC5P13010 732 aaKnown RBP11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 CMA1P23946 247 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 CYP2J2P51589 502 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 FANCCQ00597 558 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 CCDC14Q49A88 953 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 CYP26C1Q6V0L0 522 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 AK8Q96MA6 479 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 LRRC7Q96NW7 1537 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 DAPK3O43293 454 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 PRPF3O43395 683 aaKnown RBP11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 CAMTA2O94983 1202 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 STAMBPO95630 424 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 CYP2E1P05181 493 aaPredicted RBP11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 PPP1R14CQ8TAE6 165 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 NAP1L3Q99457 506 aaPredicted RBP11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 IQCGQ9H095 443 aaKnown RBP11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 CUEDC2Q9H467 287 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 LZTFL1Q9NQ48 299 aa11.46□□□□□ -0.57
NIPAL3-201ENST00000003912 TUBB4BP68371 445 aa11.46□□□□□ -0.58
NIPAL3-201ENST00000003912 CYP4A11Q02928 519 aa11.46□□□□□ -0.58
NIPAL3-201ENST00000003912 SF3B3Q15393 1217 aaKnown RBP11.46□□□□□ -0.58
NIPAL3-201ENST00000003912 CTR9Q6PD62 1173 aa11.46□□□□□ -0.58
NIPAL3-201ENST00000003912 RDH13Q8NBN7 331 aa11.46□□□□□ -0.58
NIPAL3-201ENST00000003912 PI4K2BQ8TCG2 481 aa11.46□□□□□ -0.58
NIPAL3-201ENST00000003912 XPOTO43592 962 aaKnown RBP11.46□□□□□ -0.58
NIPAL3-201ENST00000003912 GTPBP6O43824 516 aaPredicted RBP11.46□□□□□ -0.58
NIPAL3-201ENST00000003912 IFNAR1P17181 557 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms