RNA–Protein interactions for RNA: ENSMUST00000168203.1

Ebf3-203, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf3, Length 3,724 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-203ENSMUST00000168203 Pcdhb14Q6PB90 796 aa13.7□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Sf3b3Q921M3 1217 aaKnown RBP13.7□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Gm1993A6X8I0 212 aa13.7□□□□□ -0.22
Ebf3-203ENSMUST00000168203 SlxD3Z347 212 aa13.7□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Tcp10bE9PYJ0 438 aa13.7□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Ctnnd1P30999 938 aaKnown RBP13.7□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Rbm15bQ6PHZ5 887 aaKnown RBP13.7□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Sept9Q80UG5 583 aa13.7□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Tc2nQ91XT6 489 aa13.7□□□□□ -0.22
Ebf3-203ENSMUST00000168203 RtcbQ99LF4 505 aaKnown RBP13.7□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Nfxl1E9Q8I7 918 aaKnown RBP13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Gdap1O88741 358 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 RpsaP14206 295 aaKnown RBP13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Carmil2Q3V3V9 1296 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Krt40Q6IFX3 439 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 PrimpolQ6P1E7 537 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Lrrd1Q8C0R9 853 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Spats2Q8K1N4 545 aaKnown RBP13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Arhgef6Q8K4I3 771 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Atp1a1Q8VDN2 1023 aaKnown RBP13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Asic2Q925H0 512 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Abcf2Q99LE6 628 aaKnown RBP13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Thap2Q9D305 217 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Mfap3lQ9D3X9 409 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Krt71Q9R0H5 524 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Kctd19Q562E2 927 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Q8C1R3 189 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Pdrg1P59048 133 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Usp49Q6P9L4 685 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Prkag3Q8BGM7 489 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Enox1Q8BHR2 643 aaKnown RBP13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Terb1Q8C0V1 768 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 McamQ8R2Y2 648 aaKnown RBP13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 RarsQ9D0I9 660 aaKnown RBP13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Abt1Q9QYL7 269 aaKnown RBP13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Shank3Q4ACU6 1730 aa13.69□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Gm5934D3Z4U6 212 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Adssl1P28650 457 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Ercc5P35689 1170 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Il15P48346 162 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Wdr70Q3TWF6 657 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Q3TYL0 343 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Spg7Q3ULF4 781 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Ift20Q61025 132 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Irak1Q62406 710 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Fchsd1Q6PFY1 688 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Fmnl3Q6ZPF4 1028 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Ubac1Q8VDI7 409 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Atp6v0a4Q920R6 833 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Efcc1Q9JJF6 558 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Gm13023A2A8N2 498 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Map7d1A2AJI0 846 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Prr16A3KMN5 304 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Calm1P0DP26 149 aaKnown RBP13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Calm2P0DP27 149 aaKnown RBP13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Calm3P0DP28 149 aaKnown RBP13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 MarcksP26645 309 aaKnown RBP13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Traf1P39428 409 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Nlrp4fQ66X05 959 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Fbxo18Q8K2I9 1042 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Mfap3Q922T2 349 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Copb1Q9JIF7 953 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 GdaQ9R111 454 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Llgl2Q3TJ91 1027 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Kif1bpQ6ZPU9 617 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 B4galnt4Q766D5 1034 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Iqcb1Q8BP00 598 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Gramd4Q8CB44 633 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Dbndd2Q9CRD4 158 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Dydc2Q9D3X8 139 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 EhhadhQ9DBM2 718 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Prpf40aQ9R1C7 953 aaKnown RBP13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Vnn1Q9Z0K8 512 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Stk39Q9Z1W9 556 aa13.68□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Naaladl2A0A0N4SUJ3 795 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Cdc27A2A6Q5 825 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Mx1P09922 631 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Dynll1P63168 89 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Ehbp1Q69ZW3 1231 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Krt74Q6IFZ9 495 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Lman1Q9D0F3 517 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 UvssaQ9D479 717 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Wdr64Q9D565 1086 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Cacna2d3Q9Z1L5 1091 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Xrcc6P23475 608 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Ctnna1P26231 906 aaKnown RBP13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Nek1P51954 1203 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Gja3Q64448 417 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 RragaQ80X95 313 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 4930550L24RikQ99PA7 320 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Homer1Q9Z2Y3 366 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Sipa1l3G3X9J0 1776 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Ankrd63A2ARS0 390 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Gm382B1AXN3 1250 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Apol7aB2RT54 418 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Gm10134F6ZQC6 126 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Il7P10168 154 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Usp13Q5BKP2 858 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Slc27a1Q60714 646 aa13.67□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Tcp10aQ80W76 438 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms