RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Tbc1d2bQ3U0J8 965 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Nr1d1Q3UV55 615 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Rbm15bQ6PHZ5 887 aaKnown RBP9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Sec62Q8BU14 398 aaKnown RBP9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Bpifb6Q8BU51 449 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Vmn1r199Q8R280 367 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Cdk5rap2Q8K389 1822 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Gm30191A0A0U1RNT7 187 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Cyp2j7A0A140T8U1 504 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Kcng1A2BDX4 514 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Adssl1P28650 457 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Traf1P39428 409 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Mmp14P53690 582 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Traf3ip1Q149C2 625 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 HrQ61645 1182 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Phf8Q80TJ7 1023 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ublcp1Q8BGR9 318 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Phf23Q8BSN5 401 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Pak2Q8CIN4 524 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 MyripQ8K3I4 856 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Tsnaxip1Q99P25 704 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Taf1dQ9D4V4 322 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Samd15F6XZJ7 620 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Sec24cG3X972 1096 aaKnown RBP9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Clcn6O35454 870 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Casp8O89110 480 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Tdo2P48776 406 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 NfixP70257 488 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Prdm1Q60636 856 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Irak1Q62406 710 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ccdc43Q9CR29 222 aaKnown RBP9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Foxo4Q9WVH3 505 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 DnmbpQ6TXD4 1580 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Myo1eE9Q634 1107 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Gm10378F6XQQ1 160 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 RpsaP14206 295 aaKnown RBP9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Mybl2P48972 704 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Myo1fP70248 1099 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Atp11aP98197 1187 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Prpf38aQ4FK66 312 aaKnown RBP9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Myo6Q64331 1265 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ccdc80Q8R2G6 949 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Eif3hQ91WK2 352 aaKnown RBP9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Rbm43Q99J64 343 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Filip1Q9CS72 1211 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Riok3Q9DBU3 519 aaKnown RBP9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Angptl3Q9R182 455 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Slfn1Q9Z0I7 337 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ercc5P35689 1170 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Sox13Q04891 613 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Gucy2cQ3UWA6 1072 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 BcrQ6PAJ1 1270 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ppm1mQ8BU27 406 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 AopepQ8BXQ6 817 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Leng8Q8CBY3 785 aaKnown RBP9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Msantd4Q91YU3 345 aa9.76□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Cep85lA0A1W2P884 806 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Cacnb3P54285 484 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Zfyve27Q3TXX3 415 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Cracr2aQ3UP38 310 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Usp13Q5BKP2 858 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Mdh1bQ5F204 500 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Slc38a10Q5I012 1090 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Asap2Q7SIG6 958 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Fnbp1Q80TY0 616 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 PreplQ8C167 725 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Flt1P35969 1333 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Gm5580A0A0N4SVP8 411 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Krt8P11679 490 aaKnown RBP9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Tnnc1P19123 161 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Stat5bP42232 786 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Psd3Q2PFD7 1037 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Mxd3Q80US8 206 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Slc51bQ80WK2 128 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Tbc1d5Q80XQ2 815 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Znrd1-asQ8R0E5 213 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Trim59Q922Y2 403 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Epb41l3Q9WV92 929 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Mageb2A2AHM0 380 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Cnnm2Q3TWN3 875 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ccdc160Q3UYG1 323 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 F13a1Q8BH61 732 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 ToporslQ9D2F8 683 aa9.75□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Nek1P51954 1203 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Fam207aP58468 219 aaKnown RBP9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Cep128Q8BI22 1102 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Anks1bQ8BIZ1 1259 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Sp8Q8BMJ8 486 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ptrh1Q8BW00 204 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Atad2Q8CDM1 1040 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ccdc14Q8K2J4 934 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ciao1Q99KN2 339 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ankrd2Q9WV06 328 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Slit1Q80TR4 1531 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Gm28042B7ZCM9 1014 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Nck2O55033 380 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Trim80Q3V061 624 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Znf496Q5SXI5 585 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Mrps31Q61733 384 aaKnown RBP9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Sptlc3Q8BG54 563 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms