RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Dnm3Q8BZ98 863 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Cyp2j7A0A140T8U1 504 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 A0A1L1SQF0 893 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 D1Pas1P16381 660 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Tgfb2P27090 414 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Tdo2P48776 406 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Panx2Q6IMP4 677 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 CtifQ6PEE2 600 aaKnown RBP17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Calhm4Q8CE93 315 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Spire2Q8K1S6 718 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Mtmr6Q8VE11 617 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Trex1Q91XB0 314 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Cbx6Q9DBY5 414 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 NynrinQ5DTZ0 1840 aa17.92■□□□□ 0.46
Trim39-203ENSMUST00000113706 Psmd1Q3TXS7 953 aa17.92■□□□□ 0.46
Trim39-203ENSMUST00000113706 Ccdc172Q810N9 267 aa17.92■□□□□ 0.46
Trim39-203ENSMUST00000113706 Ankk1Q8BZ25 745 aa17.92■□□□□ 0.46
Trim39-203ENSMUST00000113706 Clrn2B2RVW2 232 aa17.92■□□□□ 0.46
Trim39-203ENSMUST00000113706 Krt78E9Q0F0 1068 aa17.92■□□□□ 0.46
Trim39-203ENSMUST00000113706 Nr1i2O54915 431 aa17.92■□□□□ 0.46
Trim39-203ENSMUST00000113706 Surf1P09925 306 aa17.92■□□□□ 0.46
Trim39-203ENSMUST00000113706 Frat1P70339 274 aa17.92■□□□□ 0.46
Trim39-203ENSMUST00000113706 Ppm1fQ8CGA0 452 aa17.92■□□□□ 0.46
Trim39-203ENSMUST00000113706 GlyctkQ8QZY2 523 aa17.92■□□□□ 0.46
Trim39-203ENSMUST00000113706 Trub2Q91WG3 331 aaKnown RBP17.92■□□□□ 0.46
Trim39-203ENSMUST00000113706 Snrnp35Q9D384 244 aa17.92■□□□□ 0.46
Trim39-203ENSMUST00000113706 Prss51A0A286YDY8 319 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Arhgap4B1AUY3 965 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Enox1Q8BHR2 643 aaKnown RBP17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Znf428Q8C1M2 176 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Tesk2Q8VCT9 570 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Pex3Q9QXY9 372 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Prkab1Q9R078 270 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Tspoap1Q7TNF8 1846 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Klrg2Q3UM83 387 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Vmn1r209Q5NC97 312 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Cep135Q6P5D4 1140 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Mei4Q8BRM6 389 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Cd274Q9EP73 290 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Arl6ip4Q9JM93 229 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Kcnj11Q61743 390 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Tmem39bQ810L4 492 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Cul5Q9D5V5 780 aa17.91■□□□□ 0.46
Trim39-203ENSMUST00000113706 Cacna1fQ9JIS7 1985 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Rasa2P58069 847 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Fbln1Q08879 705 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 D630036H23RikQ3UQD6 204 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Ccna1Q61456 421 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Mtss1lQ6P9S0 715 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Fbxo18Q8K2I9 1042 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Mical3Q8CJ19 1993 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Snap25P60879 206 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Cyp2e1Q05421 493 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Adgrg6Q6F3F9 1165 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 B4galnt4Q766D5 1034 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Sass6Q80UK7 654 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Klhl30Q8C3F7 581 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Tut1Q8R3F9 869 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Q91WD4 421 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Krtap5-3Q9D226 196 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Fam205a1D3YZF6 1314 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Dock2Q8C3J5 1828 aa17.9■□□□□ 0.46
Trim39-203ENSMUST00000113706 Atrnl1Q6A051 1378 aa17.89■□□□□ 0.46
Trim39-203ENSMUST00000113706 Ptger2Q62053 362 aa17.89■□□□□ 0.46
Trim39-203ENSMUST00000113706 Fermt2Q8CIB5 680 aa17.89■□□□□ 0.46
Trim39-203ENSMUST00000113706 Oxnad1Q8VE38 311 aa17.89■□□□□ 0.46
Trim39-203ENSMUST00000113706 Gmcl1Q920G9 524 aa17.89■□□□□ 0.46
Trim39-203ENSMUST00000113706 ArcQ9WV31 396 aa17.89■□□□□ 0.46
Trim39-203ENSMUST00000113706 Cul4bA2A432 970 aaKnown RBP17.89■□□□□ 0.45
Trim39-203ENSMUST00000113706 Card6E9PWH2 1175 aa17.89■□□□□ 0.45
Trim39-203ENSMUST00000113706 Sema3eP70275 775 aa17.89■□□□□ 0.45
Trim39-203ENSMUST00000113706 Pla2g4eQ50L42 875 aa17.89■□□□□ 0.45
Trim39-203ENSMUST00000113706 RragbQ6NTA4 374 aa17.89■□□□□ 0.45
Trim39-203ENSMUST00000113706 MslnlQ8C160 685 aa17.89■□□□□ 0.45
Trim39-203ENSMUST00000113706 Tab2Q99K90 693 aa17.89■□□□□ 0.45
Trim39-203ENSMUST00000113706 Txnrd2Q9JLT4 524 aa17.89■□□□□ 0.45
Trim39-203ENSMUST00000113706 Armc3A2AU72 881 aa17.89■□□□□ 0.45
Trim39-203ENSMUST00000113706 Dnaaf5B9EJR8 853 aa17.89■□□□□ 0.45
Trim39-203ENSMUST00000113706 Akr1c19G3X9Y6 323 aa17.89■□□□□ 0.45
Trim39-203ENSMUST00000113706 Dnajc19Q9CQV7 116 aa17.89■□□□□ 0.45
Trim39-203ENSMUST00000113706 MsnP26041 577 aaKnown RBP17.88■□□□□ 0.45
Trim39-203ENSMUST00000113706 Swap70Q6A028 585 aaKnown RBP17.88■□□□□ 0.45
Trim39-203ENSMUST00000113706 Krt87Q6IMF0 495 aa17.88■□□□□ 0.45
Trim39-203ENSMUST00000113706 Taf6lQ8R2K4 616 aa17.88■□□□□ 0.45
Trim39-203ENSMUST00000113706 Mageb2A2AHM0 380 aa17.88■□□□□ 0.45
Trim39-203ENSMUST00000113706 Lrrc32G3XA59 663 aa17.88■□□□□ 0.45
Trim39-203ENSMUST00000113706 Adssl1P28650 457 aa17.88■□□□□ 0.45
Trim39-203ENSMUST00000113706 OatP29758 439 aa17.88■□□□□ 0.45
Trim39-203ENSMUST00000113706 Anks1bQ8BIZ1 1259 aa17.88■□□□□ 0.45
Trim39-203ENSMUST00000113706 Kiaa1024Q8K3V7 917 aa17.88■□□□□ 0.45
Trim39-203ENSMUST00000113706 Cabp7Q91ZM8 215 aa17.88■□□□□ 0.45
Trim39-203ENSMUST00000113706 Krt34Q9D646 392 aa17.88■□□□□ 0.45
Trim39-203ENSMUST00000113706 Rsbn1lD3Z0K6 821 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 Wnt10bP48614 389 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 Tbx2Q60707 711 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 Dpf2Q61103 391 aaKnown RBP17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 Depdc1aQ8CIG0 804 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 Slc5a5Q99PN0 618 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 DmtnQ9WV69 405 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 GmnnO88513 206 aa17.87■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms