RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Arhgef5E9Q7D5 1581 aa19.95■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ccdc130Q9D516 385 aa19.95■□□□□ 0.78
Trim71-201ENSMUST00000111816 Sf3a3Q9D554 501 aaKnown RBP19.95■□□□□ 0.78
Trim71-201ENSMUST00000111816 4933406M09RikG3XA12 479 aa19.95■□□□□ 0.78
Trim71-201ENSMUST00000111816 Q3KNL4 93 aa19.95■□□□□ 0.78
Trim71-201ENSMUST00000111816 Q8BZJ8 459 aa19.95■□□□□ 0.78
Trim71-201ENSMUST00000111816 Atn1O35126 1175 aa19.95■□□□□ 0.78
Trim71-201ENSMUST00000111816 Gm5414Q6IFZ8 552 aa19.95■□□□□ 0.78
Trim71-201ENSMUST00000111816 Strip2Q8C9H6 844 aa19.95■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ccdc194A0A140LIT1 234 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Myl1P05977 188 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Trim32Q8CH72 655 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 FscbA1EGX6 1074 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Znf148Q61624 794 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Tmcc1Q69ZZ6 649 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Myl6bQ8CI43 207 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Tbx22Q8K402 517 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Slc52a2Q9D8F3 450 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Znf280cQ6P3Y5 742 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Slc4a7Q8BTY2 1034 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Krt76Q3UV17 594 aaKnown RBP19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ppp2r5bQ6PD28 497 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Vwa5aQ99KC8 793 aaKnown RBP19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Gm7535F7CXE4 302 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Def8Q99J78 448 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Xpo4Q9ESJ0 1151 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Cnpy2Q9QXT0 182 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 RecqlQ9Z129 648 aa19.94■□□□□ 0.78
Trim71-201ENSMUST00000111816 Card6E9PWH2 1175 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Fbxl5Q8C2S5 690 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Cdca7lQ922M5 438 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Adi1Q99JT9 179 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Col4a3bpQ9EQG9 624 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ctnnd1P30999 938 aaKnown RBP19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Tmem143Q8VD26 458 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ppp2r5dQ91V89 594 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Morf4l2Q9R0Q4 288 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 NntQ61941 1086 aaKnown RBP19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Mast3Q3U214 1321 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Gabpb1Q00420 383 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Sdf4Q61112 361 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Afg3l1Q920A7 789 aaKnown RBP19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Wdr17E9Q271 1322 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Tom1l1Q923U0 474 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Gm4871D3Z0W7 314 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 RragaQ80X95 313 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 Lyve1Q8BHC0 318 aa19.93■□□□□ 0.78
Trim71-201ENSMUST00000111816 L3mbtl2P59178 703 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Cep70Q6IQY5 616 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 InaP46660 501 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Zc3h12cQ5DTV4 884 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Serpinb3aG3X9V8 387 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ccdc84Q4VA36 332 aaKnown RBP19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Nr1h4Q60641 488 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Aldh8a1Q8BH00 487 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Cul1Q9WTX6 776 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Lrrc8aQ80WG5 810 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ppp2r2cQ8BG02 447 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ipo11Q8K2V6 975 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Uap1Q91YN5 522 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Sugt1Q9CX34 336 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Lca5Q80ST9 704 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 LifrP42703 1092 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Dnajc6Q80TZ3 938 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Tspan17Q9D7W4 270 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Gm3248K7N721 186 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Farp2Q91VS8 1065 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Atxn3Q9CVD2 355 aa19.92■□□□□ 0.78
Trim71-201ENSMUST00000111816 Gm10639E9Q6L7 222 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Top3aO70157 1003 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Gsta2P10648 222 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Actn1Q7TPR4 892 aaKnown RBP19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ankrd45Q810N6 248 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Wdr47Q8CGF6 920 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Cdc26Q99JP4 85 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Klhl40Q9D783 621 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Krt87Q6IMF0 495 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Camsap3Q80VC9 1252 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Etf1Q8BWY3 437 aaKnown RBP19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 4933409G03RikQ8C5U0 320 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 MthfslL7N466 203 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Grm8P47743 908 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Cyp26b1Q811W2 512 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 PdclQ9DBX2 301 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 PrxO55103 1391 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Gm7942L7N277 499 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Gna14P30677 355 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Rab3gap1Q80UJ7 981 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Znf598Q80YR4 908 aaKnown RBP19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Cct8l1Q80YT3 562 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Snx14Q8BHY8 964 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Tspan9Q8BJU2 239 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Pls1Q3V0K9 630 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Kif22Q3V300 660 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Tmtc2Q56A06 836 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ndufa5Q9CPP6 116 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Cyp2ab1S4R196 498 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ncapd2Q8K2Z4 1392 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ahi1Q8K3E5 1047 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Serpinb6cW4VSP4 379 aa19.91■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms