RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Clca2Q8BG22 942 aa17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Kiaa0319lQ8K135 1048 aa17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Zcchc18Q8VD24 393 aa17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Flt1P35969 1333 aa17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Pcdhb9E9Q5G2 828 aa17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Ctnna1P26231 906 aaKnown RBP17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Tmem191cQ9JJB1 302 aa17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Ttll7A4Q9F0 912 aa17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Gbp9Q8BTS3 619 aa17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Ppp1r3fQ9JIG4 799 aa17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Pdzd4Q9QY39 772 aa17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Krt71Q9R0H5 524 aa17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Heatr4E9Q357 955 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Cracr2aQ3UP38 310 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Gm5168Q4KL04 211 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Nr1i2O54915 431 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Lmnb2P21619 596 aaKnown RBP17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 EgfrQ01279 1210 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Tshz1Q5DTH5 1084 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Gja10Q9WUS4 505 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Speer3W4VSP1 261 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Arhgap33Q80YF9 1305 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Spata31d1bE9QA57 1361 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Ireb2Q811J3 963 aaKnown RBP17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 McamQ8R2Y2 648 aaKnown RBP17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Mrpl11Q9CQF0 192 aaKnown RBP17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Abca6Q8K441 1624 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Cpb1B2RS76 415 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Pcdha4O88689 947 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Pde1bQ01065 535 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Nme8Q715T0 586 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Ttll4Q80UG8 1193 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Trmt112Q9DCG9 125 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Mroh6V9GX81 722 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Tfdp1Q08639 410 aa17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Clasp2Q8BRT1 1286 aaKnown RBP17.31■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Skap1Q3UUV5 355 aa17.3■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Ahcyl2Q68FL4 613 aaKnown RBP17.3■□□□□ 0.36
Clcn3-203ENSMUST00000093490 RbsnQ80Y56 783 aa17.3■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Bag2Q91YN9 210 aa17.3■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Ppp2r5aQ6PD03 486 aa17.3■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Nyap1Q6PFX7 833 aa17.3■□□□□ 0.36
Clcn3-203ENSMUST00000093490 LgsnQ8CIX8 563 aa17.3■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Rfc4Q99J62 364 aa17.3■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Adcy9P51830 1353 aa17.3■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Gm6121L7MUF1 212 aa17.3■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Armcx3Q8BHS6 379 aa17.3■□□□□ 0.36
Clcn3-203ENSMUST00000093490 C130026I21RikQ8C898 291 aa17.3■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Sulf1Q8K007 870 aa17.3■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Cnbd1B1AWM0 430 aa17.29■□□□□ 0.36
Clcn3-203ENSMUST00000093490 LrmpQ60664 539 aa17.29■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Cdc23Q8BGZ4 597 aa17.29■□□□□ 0.36
Clcn3-203ENSMUST00000093490 4933409G03RikQ8C5U0 320 aa17.29■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Ciapin1Q8WTY4 309 aa17.29■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Mettl14Q3UIK4 456 aa17.29■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Slc27a1Q60714 646 aa17.29■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Unc5clQ6R653 518 aa17.29■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Tmem132dQ76HP3 1097 aa17.29■□□□□ 0.36
Clcn3-203ENSMUST00000093490 4930504O13RikQ8C5Z9 145 aa17.29■□□□□ 0.36
Clcn3-203ENSMUST00000093490 RabggtaQ9JHK4 567 aa17.29■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Taf4E9QAP7 1042 aaKnown RBP17.29■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Tas2r124Q7M718 309 aa17.29■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Zfp113Q8C689 439 aa17.29■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Tekt2Q922G7 430 aa17.29■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Rsbn1lD3Z0K6 821 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Slc26a7Q8R2Z3 656 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Mfap3Q922T2 349 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Desi2Q9D291 194 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Popdc2Q9ES82 367 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Lrriq3Q14DL3 633 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Wdr70Q3TWF6 657 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 CnstQ8CBC4 711 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Acsl3Q9CZW4 720 aaKnown RBP17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Add2Q9QYB8 725 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Krt19P19001 403 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Tnnc2P20801 160 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Vat1lQ80TB8 417 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Ppp1r37Q8BKR5 712 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Arhgef28P97433 1693 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 4933406M09RikG3XA12 479 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Dnajc5P60904 198 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 DSCC1Q14AI0 399 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Cnksr2Q80YA9 1032 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Trim60Q8VI40 466 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 YarsQ91WQ3 528 aaKnown RBP17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Eef1gQ9D8N0 437 aaKnown RBP17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Gkap1Q9JMB0 366 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Gm4297D3YWB7 211 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Kmt5aQ2YDW7 349 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Fkbp3Q62446 224 aaKnown RBP17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Cracr2bQ80ZJ8 394 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Rapgef5Q8C0Q9 814 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Serpinb13Q8CDC0 389 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Atp5c1Q91VR2 298 aaKnown RBP17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 BaatQ91X34 420 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Kctd10Q922M3 315 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Cdca7lQ922M5 438 aa17.28■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Mroh8E9PYI4 1049 aa17.27■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Pkp1P97350 728 aaKnown RBP17.27■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Krt14Q61781 484 aa17.27■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms