RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 RictorQ6QI06 1708 aa13.14□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Gm43638A0A0J9YU36 694 aa13.14□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Pfkfb3A7UAK5 555 aa13.14□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Tigd5Q499M4 642 aa13.14□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Psen2Q61144 448 aa13.14□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Ahcyl2Q68FL4 613 aaKnown RBP13.14□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Alx1Q8C8B0 326 aa13.14□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Mindy4Q3UQI9 744 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 RragaQ80X95 313 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Fam177a1Q8BR63 207 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Zfp317Q8C0Q5 607 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Iws1Q8C1D8 766 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Tspyl4Q8VD63 406 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Hic2Q9JLZ6 619 aaKnown RBP13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Slc39a2G3X943 309 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Morc2bQ8C5W4 1022 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Znf467Q8JZL0 594 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Yipf1Q91VU1 306 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Pex11aQ9Z211 246 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Lcmt1A0A0U1RNF2 332 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Kiaa1468Q148V7 1216 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Gzf1Q4VBD9 706 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Pcdha7Q91Y13 937 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Bbs5Q9CZQ9 341 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Cfap57Q9D180 1249 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 CatspereP0DP43 985 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Igfbp6P47880 238 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Bbof1Q3V079 533 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Meis1Q60954 390 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Gbp4Q61107 620 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Snd1Q78PY7 910 aaKnown RBP13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Shtn1Q8K2Q9 631 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Cacnb1Q8R3Z5 597 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Gm45194A0A140LJG2 572 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Lnx1O70263 728 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Smarcad1Q04692 1021 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Tax1bp1Q3UKC1 814 aaKnown RBP13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 L1td1Q587J6 782 aaKnown RBP13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Gm5169Q5M8P2 212 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Pank4Q80YV4 820 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Hirip3Q8BLH7 601 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Gpsm2Q8VDU0 679 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 NapgQ9CWZ7 312 aa13.13□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Gm11985A0A1B0GS61 206 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Pank2Q3U4S0 443 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Cfap52Q5F201 620 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Scnn1aQ61180 699 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Nucks1Q80XU3 234 aaKnown RBP13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 GancQ8BVW0 898 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Pstpip2Q99M15 334 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Ccdc170D3YXL0 722 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Tnnc1P19123 161 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Pik3caP42337 1068 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Gm2163Q6PCY5 473 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Aggf1Q7TN31 711 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Ushbp1Q8R370 680 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Ndufb9Q9CQJ8 179 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Gm10110D3Z5M2 615 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Ccdc169Q8BXX9 214 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Kcnk13Q8R1P5 405 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 H2-OaQ9QWV1 250 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Fxr1Q61584 677 aaKnown RBP13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Iffo1Q8BXL9 562 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Ccdc14Q8K2J4 934 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 FibpQ9JI19 357 aa13.12□□□□□ -0.31
Pcif1-201ENSMUST00000041643 MybP06876 636 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 NfixP70257 488 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Slc9a1Q61165 820 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Stxbp2Q64324 593 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Mfap3Q922T2 349 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 PdhbQ9D051 359 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Prkab1Q9R078 270 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Tspyl1O88852 379 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Hdac4Q6NZM9 1076 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Ddx19bQ8BZY3 494 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Ankrd35E9Q9D8 996 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Casp12O08736 419 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Nkx2-3P97334 362 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Kiaa1328Q6NZK5 612 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 SpopQ6ZWS8 374 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Xxylt1Q3U4G3 392 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Znf652Q5DU09 608 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Brd2Q7JJ13 798 aaKnown RBP13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Bicd1Q8BR07 835 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 LRWD1Q8BUI3 648 aaKnown RBP13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Sclt1G5E861 688 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 PsdQ5DTT2 1024 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Eif3j2Q66JS6 263 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 KaznQ69ZS8 779 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Dhx37Q6NZL1 1150 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 4921524L21RikQ9D5T2 438 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 MesdQ9ERE7 224 aa13.11□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Ccdc25Q78PG9 208 aa13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Lrrc41Q8K1C9 807 aa13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 SmapQ9R0P4 181 aaKnown RBP13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Stim2P83093 746 aa13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Pspc1Q8R326 523 aaKnown RBP13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Zbtb7bQ64321 544 aa13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Coa7Q921H9 231 aa13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Rilpl1Q9JJC6 406 aa13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms