RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Esco1Q69Z69 843 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Gpbp1Q6NXH3 473 aaKnown RBP15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Trim6Q8BGE7 488 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Cadps2Q8BYR5 1297 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Slc9b1Q8C0X2 565 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Git2Q9JLQ2 708 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Irs4Q9Z0Y7 1216 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Phlpp1Q8CHE4 1687 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Znfx1Q8R151 1909 aaKnown RBP15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Prl7d1P04769 244 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 IntuQ059U7 942 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Mdh1bQ5F204 500 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Sycp1Q62209 993 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Tshz2Q68FE9 1030 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Asic3Q6X1Y6 530 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Mindy1Q76LS9 468 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Hook2Q7TMK6 716 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Spag7Q7TNE3 227 aaKnown RBP15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Zfp446Q8C9M8 523 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Usp15Q8R5H1 981 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Dnajc17Q91WT4 303 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 EhhadhQ9DBM2 718 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 SyncQ9EPM5 470 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Foxn3Q499D0 457 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Cdcp1Q5U462 833 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Arhgef2Q60875 985 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Jmjd4Q8BFT6 427 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Eif3cQ8R1B4 911 aaKnown RBP15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Fsip1Q9D3V5 435 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 ParvgQ9ERD8 331 aa15□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ankrd63A2ARS0 390 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Izumo3A6PWV3 263 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Arhgap6O54834 987 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ptpn12P35831 775 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Pde4dQ01063 747 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Sec31aQ3UPL0 1230 aaKnown RBP14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ankrd13cQ3UX43 541 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Pde1cQ64338 706 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Kdm1aQ6ZQ88 853 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Miga2Q8BK03 593 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Krt82Q99M74 516 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Cfap44E9Q5M6 1843 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Tuft1O08970 390 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Zfp781Q0P5U5 243 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ppp1r21Q3TDD9 780 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Exoc5Q3TPX4 708 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Bbof1Q3V079 533 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Sik1Q60670 779 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Cd37Q61470 281 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Cnnm4Q69ZF7 771 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Klra17Q9JMA4 273 aa14.99□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ccdc24E9PUW8 296 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 E9QMW4 1145 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Speer4aF8VPX6 267 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Il27raO70394 623 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Nap1l1P28656 391 aaKnown RBP14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Kcnb1Q03717 857 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ifit1bl2Q3U687 466 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Aak1Q3UHJ0 959 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Slc9a2Q3ZAS0 814 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Mum1l1Q4VA55 681 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Znf280dQ68FE8 974 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Cracr2bQ80ZJ8 394 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Vcpip1Q8CDG3 1220 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Trub2Q91WG3 331 aaKnown RBP14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 1700018B08RikQ9DA83 213 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Arpp21Q9DCB4 807 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Tmem132bF7BAB2 1078 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ftl1P29391 183 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Tmtc2Q56A06 836 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Rnf187Q8BFX1 236 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 ZgpatQ8VDM1 511 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 GzmnQ920S1 248 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ipo7Q9EPL8 1038 aaKnown RBP14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Cd2apQ9JLQ0 637 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Nr2e3Q9QXZ7 395 aa14.98□□□□□ -0.01
Nup88-201ENSMUST00000035283 Sec14l1A8Y5H7 715 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Fam186bD3Z420 943 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Prl2c2P04095 224 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 AgtP11859 477 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Myo19Q5SV80 963 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Krt42Q6IFX2 452 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 WhrnQ80VW5 918 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Prl7b1Q8CGZ9 251 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Sh3bp5lQ99LH9 392 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Mkrn1Q9QXP6 481 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 NpcdF8VQB8 469 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Chrna9G3X8Z7 479 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Vmn2r78K7N6U5 853 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Nr1i2O54915 431 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Kcna1P16388 495 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Fam83bQ0VBM2 1012 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Serpinb6dQ3UWK8 375 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ccdc148Q6P5U8 527 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Jade2Q6ZQF7 829 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Baiap3Q80TT2 1134 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ttll4Q80UG8 1193 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ushbp1Q8R370 680 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Trap1Q9CQN1 706 aaKnown RBP14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Nxnl2Q9D531 156 aa14.97□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms