RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 RtcbQ99LF4 505 aaKnown RBP25.26■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Brpf3B2KF05 1204 aaKnown RBP25.26■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Rtel1Q0VGM9 1203 aa25.26■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Git1Q68FF6 770 aa25.26■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Pank4Q80YV4 820 aa25.26■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Gimap5Q8BWF2 308 aa25.25■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Tom1l1Q923U0 474 aa25.25■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Erich2E9Q1A6 463 aa25.25■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Ric8aQ3TIR3 530 aa25.25■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Nuak1Q641K5 658 aa25.25■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Atp6v1e2Q9D593 226 aa25.25■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Fen1P39749 378 aa25.25■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 CrklP47941 303 aa25.25■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 3830403N18RikQ9D6C3 208 aa25.25■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Ube3bQ9ES34 1070 aa25.25■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Sval3Q76I99 144 aa25.24■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Mtrf1lQ8BJU9 373 aa25.24■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Dhx30Q99PU8 1217 aaKnown RBP25.24■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 NxnP97346 435 aa25.24■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Krt74Q6IFZ9 495 aa25.24■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Edc3Q8K2D3 508 aaKnown RBP25.24■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Mknk2Q8CDB0 459 aa25.24■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Ppp1r3fQ9JIG4 799 aa25.24■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Fmn2Q9JL04 1578 aa25.24■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Gm5580A0A0N4SVP8 411 aa25.24■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Ubn1Q4G0F8 1135 aa25.24■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Dhx38Q80X98 1228 aa25.24■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Slc39a6Q8C145 765 aa25.24■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Snx1Q9WV80 522 aa25.24■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Gm38392E9Q2A2 434 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Mapkapk5O54992 473 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Hcls1P49710 486 aaKnown RBP25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Arhgap29Q8CGF1 1266 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Rbm43Q99J64 343 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Igsf1Q7TQA1 1317 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Polr2fP61219 127 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 InhbaQ04998 424 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Arhgap10Q6Y5D8 786 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Rcor2Q8C796 523 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Erp44Q9D1Q6 406 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Samd9lQ69Z37 1561 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Armc3A2AU72 881 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Xbp1O35426 267 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Zc3h18Q0P678 948 aaKnown RBP25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Ddb1Q3U1J4 1140 aaKnown RBP25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Krt87Q6IMF0 495 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Polr2bQ8CFI7 1174 aaKnown RBP25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Kdm5cP41230 1554 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Abcc2Q8VI47 1543 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Med10Q9CXU0 135 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Ccdc70Q9D9B0 223 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Strn3Q9ERG2 796 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Msh6P54276 1358 aaKnown RBP25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Arhgap17Q3UIA2 846 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Rassf6Q80UQ2 353 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Rapgef5Q8C0Q9 814 aa25.23■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Ugt1a5B2RT14 529 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Timm44O35857 452 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Pgrmc1O55022 195 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Anks1aP59672 1150 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Sap30bpQ02614 308 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Disp3A3KFU9 1347 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Myo3bQ1EG27 1305 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 NfkbibQ60778 359 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Zbtb7bQ64321 544 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Dars2Q8BIP0 653 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Telo2Q9DC40 840 aaKnown RBP25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Lonrf3Q9D4H7 753 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 A0A1W2P6Q8 802 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Gm9048A0A1W2P7H4 802 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 A0A1W2P7Z8 802 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Gm9046A0A1W2P855 802 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 4932429P05RikA2ADI4 785 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Tnnc2P20801 160 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 PhexP70669 749 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Kctd16Q5DTY9 427 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Slc44a1Q6X893 653 aa25.22■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Usp28Q5I043 1051 aa25.21■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Taco1Q8K0Z7 294 aaKnown RBP25.21■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Kiaa1468Q148V7 1216 aa25.21■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Fermt3Q8K1B8 665 aa25.21■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Rgs12Q8CGE9 1381 aa25.21■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Mmrn1B2RPV6 1210 aa25.21■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Cyth1Q9QX11 398 aa25.21■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Adcy9P51830 1353 aa25.2■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Rab20P35295 233 aa25.2■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Gas7Q60780 421 aa25.2■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 L3mbtl3Q8BLB7 883 aa25.2■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Plagl1Q9JLQ4 704 aa25.2■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Plekhg1F6S200 1446 aa25.2■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Calb1P12658 261 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Ftl2P49945 183 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Tcp11Q01755 566 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Q3TTJ4 293 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Gm9774A0A0A6YVU8 407 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Rad51bO35719 350 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Surf1P09925 306 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Atp8a1P70704 1164 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Iqsec3Q3TES0 1195 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Bend3Q6PAL0 825 aa25.2■■□□□ 1.62
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms