RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 PfasQ5SUR0 1337 aa19.85■□□□□ 0.77
Trim54-201ENSMUST00000013771 Gm15448F6PZL4 682 aa19.85■□□□□ 0.77
Trim54-201ENSMUST00000013771 BC048507Q80ZS7 89 aa19.85■□□□□ 0.77
Trim54-201ENSMUST00000013771 Nek11Q8C0Q4 628 aa19.85■□□□□ 0.77
Trim54-201ENSMUST00000013771 Zcchc18Q8VD24 393 aa19.85■□□□□ 0.77
Trim54-201ENSMUST00000013771 AclyQ91V92 1091 aaKnown RBP19.85■□□□□ 0.77
Trim54-201ENSMUST00000013771 Rhobtb2Q91V93 728 aa19.85■□□□□ 0.77
Trim54-201ENSMUST00000013771 MecomP14404 1042 aa19.84■□□□□ 0.77
Trim54-201ENSMUST00000013771 Pip5kl1Q6U7H8 395 aa19.84■□□□□ 0.77
Trim54-201ENSMUST00000013771 Brd2Q7JJ13 798 aaKnown RBP19.84■□□□□ 0.77
Trim54-201ENSMUST00000013771 Cetn4Q8K4K1 168 aa19.84■□□□□ 0.77
Trim54-201ENSMUST00000013771 Alas1Q8VC19 642 aa19.84■□□□□ 0.77
Trim54-201ENSMUST00000013771 Ccdc183A2AJB1 534 aa19.83■□□□□ 0.76
Trim54-201ENSMUST00000013771 Mcm2P97310 904 aa19.83■□□□□ 0.76
Trim54-201ENSMUST00000013771 Gm1587Q3UT80 123 aa19.83■□□□□ 0.76
Trim54-201ENSMUST00000013771 Usp6nlQ80XC3 819 aa19.83■□□□□ 0.76
Trim54-201ENSMUST00000013771 Fam109aQ8BH49 266 aa19.83■□□□□ 0.76
Trim54-201ENSMUST00000013771 Adnp2Q8CHC8 1165 aaKnown RBP19.83■□□□□ 0.76
Trim54-201ENSMUST00000013771 Adgrf4Q9D2L6 698 aa19.83■□□□□ 0.76
Trim54-201ENSMUST00000013771 Tbx20Q9ES03 445 aa19.83■□□□□ 0.76
Trim54-201ENSMUST00000013771 PhaxQ9JJT9 385 aaKnown RBP19.83■□□□□ 0.76
Trim54-201ENSMUST00000013771 Atp1a4Q9WV27 1032 aa19.83■□□□□ 0.76
Trim54-201ENSMUST00000013771 IkQ9Z1M8 557 aaKnown RBP19.83■□□□□ 0.76
Trim54-201ENSMUST00000013771 Trim30dE9PWL0 497 aa19.82■□□□□ 0.76
Trim54-201ENSMUST00000013771 Il13ra2O88786 383 aa19.82■□□□□ 0.76
Trim54-201ENSMUST00000013771 Ttbk2Q3UVR3 1243 aa19.82■□□□□ 0.76
Trim54-201ENSMUST00000013771 Vmn1r209Q5NC97 312 aa19.82■□□□□ 0.76
Trim54-201ENSMUST00000013771 Kiaa1328Q6NZK5 612 aa19.82■□□□□ 0.76
Trim54-201ENSMUST00000013771 Tdp1Q8BJ37 609 aa19.82■□□□□ 0.76
Trim54-201ENSMUST00000013771 Mrpl58Q8R035 206 aa19.82■□□□□ 0.76
Trim54-201ENSMUST00000013771 Zcchc14Q8VIG0 956 aa19.82■□□□□ 0.76
Trim54-201ENSMUST00000013771 Sppl3Q9CUS9 384 aa19.82■□□□□ 0.76
Trim54-201ENSMUST00000013771 Snx29Q9D3S3 818 aa19.82■□□□□ 0.76
Trim54-201ENSMUST00000013771 Ankrd35E9Q9D8 996 aa19.81■□□□□ 0.76
Trim54-201ENSMUST00000013771 Myl3P09542 204 aa19.81■□□□□ 0.76
Trim54-201ENSMUST00000013771 Cnksr3Q8BMA3 555 aa19.81■□□□□ 0.76
Trim54-201ENSMUST00000013771 Cnot6lQ8VEG6 555 aa19.81■□□□□ 0.76
Trim54-201ENSMUST00000013771 Msgn1Q9JK54 188 aa19.81■□□□□ 0.76
Trim54-201ENSMUST00000013771 Tle2Q9WVB2 767 aa19.81■□□□□ 0.76
Trim54-201ENSMUST00000013771 Otud7bB2RUR8 840 aa19.8■□□□□ 0.76
Trim54-201ENSMUST00000013771 SpibO35906 267 aa19.8■□□□□ 0.76
Trim54-201ENSMUST00000013771 Stx8O88983 236 aa19.8■□□□□ 0.76
Trim54-201ENSMUST00000013771 Eepd1Q3TGW2 569 aa19.8■□□□□ 0.76
Trim54-201ENSMUST00000013771 Samhd1Q60710 627 aa19.8■□□□□ 0.76
Trim54-201ENSMUST00000013771 Phlda1Q62392 405 aa19.8■□□□□ 0.76
Trim54-201ENSMUST00000013771 Fbxo10Q7TQF2 950 aa19.8■□□□□ 0.76
Trim54-201ENSMUST00000013771 Sap130Q8BIH0 1057 aa19.8■□□□□ 0.76
Trim54-201ENSMUST00000013771 Tcp11l1Q8BTG3 509 aa19.8■□□□□ 0.76
Trim54-201ENSMUST00000013771 RestQ8VIG1 1082 aa19.8■□□□□ 0.76
Trim54-201ENSMUST00000013771 Tmem39aQ9CYC3 486 aa19.8■□□□□ 0.76
Trim54-201ENSMUST00000013771 Hcn4O70507 1186 aa19.79■□□□□ 0.76
Trim54-201ENSMUST00000013771 Kifap3P70188 793 aa19.79■□□□□ 0.76
Trim54-201ENSMUST00000013771 Kif20aP97329 887 aa19.79■□□□□ 0.76
Trim54-201ENSMUST00000013771 Rnpc3Q3UZ01 514 aaKnown RBP19.79■□□□□ 0.76
Trim54-201ENSMUST00000013771 Trappc3lQ4KL14 181 aa19.79■□□□□ 0.76
Trim54-201ENSMUST00000013771 Peg10Q7TN75 958 aaKnown RBP19.79■□□□□ 0.76
Trim54-201ENSMUST00000013771 Znf618Q80YY7 953 aaKnown RBP19.79■□□□□ 0.76
Trim54-201ENSMUST00000013771 Prune1Q8BIW1 454 aa19.79■□□□□ 0.76
Trim54-201ENSMUST00000013771 Vmn1r191Q8K4D0 298 aa19.79■□□□□ 0.76
Trim54-201ENSMUST00000013771 Rnf123Q5XPI3 1314 aa19.79■□□□□ 0.76
Trim54-201ENSMUST00000013771 Cntnap2Q9CPW0 1332 aa19.79■□□□□ 0.76
Trim54-201ENSMUST00000013771 Obsl1D3YYU8 1804 aaKnown RBP19.78■□□□□ 0.76
Trim54-201ENSMUST00000013771 AW822073A0A0N4SUK1 652 aa19.78■□□□□ 0.76
Trim54-201ENSMUST00000013771 TroapB7ZNG4 668 aa19.78■□□□□ 0.76
Trim54-201ENSMUST00000013771 Neurl1bQ0MW30 546 aa19.78■□□□□ 0.76
Trim54-201ENSMUST00000013771 Tp53i13Q5F267 385 aa19.78■□□□□ 0.76
Trim54-201ENSMUST00000013771 Spty2d1Q68FG3 682 aa19.78■□□□□ 0.76
Trim54-201ENSMUST00000013771 Shisa4Q8CA71 197 aa19.78■□□□□ 0.76
Trim54-201ENSMUST00000013771 Nup88Q8CEC0 753 aaKnown RBP19.78■□□□□ 0.76
Trim54-201ENSMUST00000013771 Slc12a8Q8VI23 705 aa19.78■□□□□ 0.76
Trim54-201ENSMUST00000013771 Lrrfip2Q91WK0 415 aa19.78■□□□□ 0.76
Trim54-201ENSMUST00000013771 KnstrnQ9D9Z1 312 aaKnown RBP19.78■□□□□ 0.76
Trim54-201ENSMUST00000013771 Trim12cD3Z3L3 497 aa19.77■□□□□ 0.76
Trim54-201ENSMUST00000013771 Prom1O54990 867 aa19.77■□□□□ 0.76
Trim54-201ENSMUST00000013771 Tlk2O55047 718 aa19.77■□□□□ 0.76
Trim54-201ENSMUST00000013771 Cd72P21855 354 aa19.77■□□□□ 0.76
Trim54-201ENSMUST00000013771 Hps5P59438 1126 aa19.77■□□□□ 0.76
Trim54-201ENSMUST00000013771 Pgm5Q8BZF8 567 aa19.77■□□□□ 0.76
Trim54-201ENSMUST00000013771 MslnlQ8C160 685 aa19.77■□□□□ 0.76
Trim54-201ENSMUST00000013771 Vps53Q8CCB4 832 aa19.77■□□□□ 0.76
Trim54-201ENSMUST00000013771 Etv3Q8R4Z4 513 aa19.77■□□□□ 0.76
Trim54-201ENSMUST00000013771 Sil1Q9EPK6 465 aa19.77■□□□□ 0.76
Trim54-201ENSMUST00000013771 Galk1Q9R0N0 392 aa19.77■□□□□ 0.76
Trim54-201ENSMUST00000013771 Glud1P26443 558 aaKnown RBP19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 Mcph1Q7TT79 822 aa19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 GldcQ91W43 1025 aa19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 StrbpQ91WM1 672 aaKnown RBP19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 Usp26Q99MX1 835 aa19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 Mad2l2Q9D752 211 aa19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 Sall1Q9ER74 1322 aa19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 Gm30191A0A0U1RNT7 187 aa19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 Gp6P0C191 313 aa19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 TbcaP48428 108 aaKnown RBP19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 NfibP97863 570 aaKnown RBP19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 Cnga2Q62398 664 aa19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 Atad2Q8CDM1 1040 aa19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 GneQ91WG8 722 aaKnown RBP19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 Mcoln1Q99J21 580 aa19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 Krt84Q99M73 603 aa19.76■□□□□ 0.75
Trim54-201ENSMUST00000013771 Hic1Q9R1Y5 733 aa19.76■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms