RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 YGR079WP53249 370 aa-0.33□□□□□ -2.46
snR38snR38 SOL4P53315 255 aa-0.33□□□□□ -2.46
snR38snR38 DCP2P53550 970 aaKnown RBP-0.33□□□□□ -2.46
snR38snR38 TOF1P53840 1238 aa-0.33□□□□□ -2.46
snR38snR38 UGO1Q03327 502 aa-0.33□□□□□ -2.46
snR38snR38 YHM2Q04013 314 aa-0.33□□□□□ -2.46
snR38snR38 HRT1Q08273 121 aa-0.33□□□□□ -2.46
snR38snR38 KEL3Q08979 651 aaPredicted RBP-0.33□□□□□ -2.46
snR38snR38 CTF3Q12748 733 aa-0.33□□□□□ -2.46
snR38snR38 TPS2P31688 896 aaKnown RBP-0.34□□□□□ -2.46
snR38snR38 DPH2P32461 534 aa-0.34□□□□□ -2.46
snR38snR38 PET309P32522 965 aaPredicted RBP-0.34□□□□□ -2.46
snR38snR38 LHS1P36016 881 aa-0.34□□□□□ -2.46
snR38snR38 ADE17P38009 592 aaKnown RBP-0.34□□□□□ -2.46
snR38snR38 SPO73P40031 143 aa-0.34□□□□□ -2.46
snR38snR38 MRX1P40050 688 aa-0.34□□□□□ -2.46
snR38snR38 YIL060WP40519 144 aa-0.34□□□□□ -2.46
snR38snR38 DFG10P40526 253 aa-0.34□□□□□ -2.46
snR38snR38 DJP1P40564 432 aa-0.34□□□□□ -2.46
snR38snR38 BAT2P47176 376 aaKnown RBP-0.34□□□□□ -2.46
snR38snR38 MSY1P48527 492 aa-0.34□□□□□ -2.46
snR38snR38 HUL5P53119 910 aa-0.34□□□□□ -2.46
snR38snR38 RTK1Q12100 620 aaPredicted RBP-0.34□□□□□ -2.46
snR38snR38 YLR108CQ12259 485 aa-0.34□□□□□ -2.46
snR38snR38 RPS21BQ3E754 87 aaKnown RBP-0.34□□□□□ -2.46
snR38snR38 APM4Q99186 491 aa-0.34□□□□□ -2.46
snR38snR38 CHO1P08456 276 aa-0.35□□□□□ -2.47
snR38snR38 SNF3P10870 884 aa-0.35□□□□□ -2.47
snR38snR38 KGD1P20967 1014 aaKnown RBP-0.35□□□□□ -2.47
snR38snR38 RNA14P25298 677 aaKnown RBP-0.35□□□□□ -2.47
snR38snR38 HXT4P32467 576 aa-0.35□□□□□ -2.47
snR38snR38 MIA40P36046 403 aa-0.35□□□□□ -2.47
snR38snR38 MRPL10P36520 322 aa-0.35□□□□□ -2.47
snR38snR38 ELO1P39540 310 aa-0.35□□□□□ -2.47
snR38snR38 ARB1P40024 610 aaKnown RBP-0.35□□□□□ -2.47
snR38snR38 SEC9P40357 651 aa-0.35□□□□□ -2.47
snR38snR38 GAB1P41733 394 aa-0.35□□□□□ -2.47
snR38snR38 ATP22P50273 684 aaPredicted RBP-0.35□□□□□ -2.47
snR38snR38 PKP2P53170 491 aa-0.35□□□□□ -2.47
snR38snR38 YTP1P53584 459 aa-0.35□□□□□ -2.47
snR38snR38 CAF40P53829 373 aa-0.35□□□□□ -2.47
snR38snR38 HEF3P53978 1044 aaKnown RBP-0.35□□□□□ -2.47
snR38snR38 ADE16P54113 591 aaKnown RBP-0.35□□□□□ -2.47
snR38snR38 TRS31Q03337 283 aa-0.35□□□□□ -2.47
snR38snR38 HFI1Q12060 488 aa-0.35□□□□□ -2.47
snR38snR38 YDL009CQ12210 107 aa-0.35□□□□□ -2.47
snR38snR38 RVB2Q12464 471 aaKnown RBP-0.35□□□□□ -2.47
snR38snR38 RAX2Q12465 1220 aa-0.35□□□□□ -2.47
snR38snR38 URA3P03962 267 aa-0.36□□□□□ -2.47
snR38snR38 HIP1P06775 603 aa-0.36□□□□□ -2.47
snR38snR38 APM3P38153 483 aa-0.36□□□□□ -2.47
snR38snR38 CKB2P38930 258 aa-0.36□□□□□ -2.47
snR38snR38 VPS52P39904 641 aa-0.36□□□□□ -2.47
snR38snR38 WWM1P43582 211 aaKnown RBP-0.36□□□□□ -2.47
snR38snR38 CTK2P46962 323 aa-0.36□□□□□ -2.47
snR38snR38 RNR4P49723 345 aaKnown RBP-0.36□□□□□ -2.47
snR38snR38 MNT2P53059 558 aa-0.36□□□□□ -2.47
snR38snR38 GTB1Q04924 702 aa-0.36□□□□□ -2.47
snR38snR38 GLO2Q05584 274 aa-0.36□□□□□ -2.47
snR38snR38 NGL1Q08213 363 aaKnown RBP-0.36□□□□□ -2.47
snR38snR38 PCT1P13259 424 aa-0.37□□□□□ -2.47
snR38snR38 FAT1P38225 669 aa-0.37□□□□□ -2.47
snR38snR38 HXT6P39003 570 aaKnown RBP-0.37□□□□□ -2.47
snR38snR38 HXT7P39004 570 aa-0.37□□□□□ -2.47
snR38snR38 SCC4P40090 624 aa-0.37□□□□□ -2.47
snR38snR38 UTP18P40362 594 aaPredicted RBP-0.37□□□□□ -2.47
snR38snR38 YFL012WP43580 148 aa-0.37□□□□□ -2.47
snR38snR38 DLD2P46681 530 aaKnown RBP-0.37□□□□□ -2.47
snR38snR38 IBD2P53892 351 aa-0.37□□□□□ -2.47
snR38snR38 HER2Q03557 464 aa-0.37□□□□□ -2.47
snR38snR38 YMR087WQ04299 284 aa-0.37□□□□□ -2.47
snR38snR38 VPS74Q06385 345 aa-0.37□□□□□ -2.47
snR38snR38 YDL057WQ07379 328 aa-0.37□□□□□ -2.47
snR38snR38 IRC25Q07951 179 aa-0.37□□□□□ -2.47
snR38snR38 SLF1Q12034 447 aaKnown RBP-0.37□□□□□ -2.47
snR38snR38 ADE3P07245 946 aaKnown RBP-0.38□□□□□ -2.47
snR38snR38 CBP6P07253 162 aaPredicted RBP-0.38□□□□□ -2.47
snR38snR38 YCR022CP25620 114 aa-0.38□□□□□ -2.47
snR38snR38 REC114P32841 428 aa-0.38□□□□□ -2.47
snR38snR38 SOF1P33750 489 aaKnown RBP-0.38□□□□□ -2.47
snR38snR38 SSP120P39931 234 aaKnown RBP-0.38□□□□□ -2.47
snR38snR38 FMP10P40098 244 aa-0.38□□□□□ -2.47
snR38snR38 GAT2P40209 560 aa-0.38□□□□□ -2.47
snR38snR38 YJL144WP47009 104 aa-0.38□□□□□ -2.47
snR38snR38 MUB1Q03162 620 aa-0.38□□□□□ -2.47
snR38snR38 RLI1Q03195 608 aaKnown RBP-0.38□□□□□ -2.47
snR38snR38 YMR160WQ03823 816 aa-0.38□□□□□ -2.47
snR38snR38 ATG26Q06321 1198 aa-0.38□□□□□ -2.47
snR38snR38 ATG23Q06671 453 aa-0.38□□□□□ -2.47
snR38snR38 PET111P08468 800 aa-0.39□□□□□ -2.47
snR38snR38 ERR1P0CX10 437 aa-0.39□□□□□ -2.47
snR38snR38 ERR2P0CX11 437 aa-0.39□□□□□ -2.47
snR38snR38 SCH9P11792 824 aaKnown RBP-0.39□□□□□ -2.47
snR38snR38 RPS7AP26786 190 aaKnown RBP-0.39□□□□□ -2.47
snR38snR38 FRD1P32614 470 aaKnown RBP-0.39□□□□□ -2.47
snR38snR38 MNS1P32906 549 aa-0.39□□□□□ -2.47
snR38snR38 DID4P36108 232 aa-0.39□□□□□ -2.47
snR38snR38 NAT2P37293 288 aa-0.39□□□□□ -2.47
snR38snR38 OSH3P38713 996 aaKnown RBP-0.39□□□□□ -2.47
snR38snR38 YER184CP39961 794 aa-0.39□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms