RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C RRP6Q12149 733 aaKnown RBP2.17□□□□□ -2.06
RPL40BYKR094C SEC62P21825 274 aa2.16□□□□□ -2.06
RPL40BYKR094C GRX4P32642 244 aa2.16□□□□□ -2.06
RPL40BYKR094C ECM15P35195 104 aa2.16□□□□□ -2.06
RPL40BYKR094C ESL2P36168 1195 aa2.16□□□□□ -2.06
RPL40BYKR094C RFS1P38234 210 aaKnown RBP2.16□□□□□ -2.06
RPL40BYKR094C YBR138CP38277 524 aa2.16□□□□□ -2.06
RPL40BYKR094C YTA12P40341 825 aa2.16□□□□□ -2.06
RPL40BYKR094C SDT1P53078 280 aa2.16□□□□□ -2.06
RPL40BYKR094C YGL082WP53155 381 aa2.16□□□□□ -2.06
RPL40BYKR094C SAM50P53969 484 aa2.16□□□□□ -2.06
RPL40BYKR094C HEL2Q05580 639 aaKnown RBP2.16□□□□□ -2.06
RPL40BYKR094C ATP2P00830 511 aaKnown RBP2.15□□□□□ -2.07
RPL40BYKR094C MIS1P09440 975 aaKnown RBP2.15□□□□□ -2.07
RPL40BYKR094C PMR1P13586 950 aa2.15□□□□□ -2.07
RPL40BYKR094C WSC2P53832 503 aa2.15□□□□□ -2.07
RPL40BYKR094C DIC1Q06143 298 aa2.15□□□□□ -2.07
RPL40BYKR094C PIF1P07271 859 aa2.14□□□□□ -2.07
RPL40BYKR094C VPS17P32913 551 aa2.14□□□□□ -2.07
RPL40BYKR094C YNK1P36010 153 aaKnown RBP2.14□□□□□ -2.07
RPL40BYKR094C UBA4P38820 440 aa2.14□□□□□ -2.07
RPL40BYKR094C YGL039WP53183 348 aaKnown RBP2.14□□□□□ -2.07
RPL40BYKR094C TRS130Q03660 1102 aa2.14□□□□□ -2.07
RPL40BYKR094C CSR1Q06705 408 aaKnown RBP2.14□□□□□ -2.07
RPL40BYKR094C THI20Q08224 551 aa2.14□□□□□ -2.07
RPL40BYKR094C YOR387CQ08910 206 aa2.14□□□□□ -2.07
RPL40BYKR094C YDL012CQ12489 107 aa2.14□□□□□ -2.07
RPL40BYKR094C YER078W-AQ3E7A2 54 aa2.14□□□□□ -2.07
RPL40BYKR094C SNF3P10870 884 aa2.13□□□□□ -2.07
RPL40BYKR094C RER1P25560 188 aa2.13□□□□□ -2.07
RPL40BYKR094C PGS1P25578 521 aa2.13□□□□□ -2.07
RPL40BYKR094C SPR1P32603 445 aa2.13□□□□□ -2.07
RPL40BYKR094C PRS1P32895 427 aaKnown RBP2.13□□□□□ -2.07
RPL40BYKR094C NUP120P35729 1037 aa2.13□□□□□ -2.07
RPL40BYKR094C SPC72P39723 622 aa2.13□□□□□ -2.07
RPL40BYKR094C SSK1Q07084 712 aa2.13□□□□□ -2.07
RPL40BYKR094C HNT3Q08702 217 aa2.13□□□□□ -2.07
RPL40BYKR094C CMK1P27466 446 aaKnown RBP2.12□□□□□ -2.07
RPL40BYKR094C NAM9P27929 486 aa2.12□□□□□ -2.07
RPL40BYKR094C SNC1P31109 117 aa2.12□□□□□ -2.07
RPL40BYKR094C SAC6P32599 642 aaKnown RBP2.12□□□□□ -2.07
RPL40BYKR094C TUL1P36096 758 aa2.12□□□□□ -2.07
RPL40BYKR094C PAF1P38351 445 aa2.12□□□□□ -2.07
RPL40BYKR094C VPS52P39904 641 aa2.12□□□□□ -2.07
RPL40BYKR094C ATG9Q12142 997 aa2.12□□□□□ -2.07
RPL40BYKR094C LCB1P25045 558 aaKnown RBP2.11□□□□□ -2.07
RPL40BYKR094C YIM1P28625 365 aa2.11□□□□□ -2.07
RPL40BYKR094C SRB5P32585 307 aa2.11□□□□□ -2.07
RPL40BYKR094C PMU1P36069 295 aa2.11□□□□□ -2.07
RPL40BYKR094C ANS1P38832 159 aa2.11□□□□□ -2.07
RPL40BYKR094C PKP1P40530 394 aa2.11□□□□□ -2.07
RPL40BYKR094C IST1P53843 298 aaPredicted RBP2.11□□□□□ -2.07
RPL40BYKR094C YLR152CP54072 576 aa2.11□□□□□ -2.07
RPL40BYKR094C BRE1Q07457 700 aaKnown RBP2.11□□□□□ -2.07
RPL40BYKR094C RRP12Q12754 1228 aaKnown RBP2.11□□□□□ -2.07
RPL40BYKR094C HXK2P04807 486 aaKnown RBP2.1□□□□□ -2.07
RPL40BYKR094C SST2P11972 698 aaKnown RBP2.1□□□□□ -2.07
RPL40BYKR094C ISY1P21374 235 aaPredicted RBP2.1□□□□□ -2.07
RPL40BYKR094C YCR022CP25620 114 aa2.1□□□□□ -2.07
RPL40BYKR094C DEG1P31115 442 aaKnown RBP2.1□□□□□ -2.07
RPL40BYKR094C YME1P32795 747 aa2.1□□□□□ -2.07
RPL40BYKR094C NPR2P39923 615 aa2.1□□□□□ -2.07
RPL40BYKR094C ASE1P50275 885 aa2.1□□□□□ -2.07
RPL40BYKR094C STR3P53101 465 aaKnown RBP2.1□□□□□ -2.07
RPL40BYKR094C BTN2P53286 410 aa2.1□□□□□ -2.07
RPL40BYKR094C MSO1P53604 210 aaKnown RBP2.1□□□□□ -2.07
RPL40BYKR094C CSL4P53859 292 aaPredicted RBP2.1□□□□□ -2.07
RPL40BYKR094C HIM1Q06674 414 aa2.1□□□□□ -2.07
RPL40BYKR094C TMA16Q08687 178 aa2.1□□□□□ -2.07
RPL40BYKR094C SPT15P13393 240 aaKnown RBP2.09□□□□□ -2.07
RPL40BYKR094C CLB4P24871 460 aa2.09□□□□□ -2.07
RPL40BYKR094C FUN19P28003 413 aaPredicted RBP2.09□□□□□ -2.07
RPL40BYKR094C TFC3P34111 1160 aa2.09□□□□□ -2.07
RPL40BYKR094C SWD3P38123 315 aa2.09□□□□□ -2.07
RPL40BYKR094C PUG1P40100 303 aa2.09□□□□□ -2.07
RPL40BYKR094C SMC3P47037 1230 aa2.09□□□□□ -2.07
RPL40BYKR094C FOL1P53848 824 aa2.09□□□□□ -2.07
RPL40BYKR094C TGL2P54857 326 aa2.09□□□□□ -2.07
RPL40BYKR094C RLI1Q03195 608 aaKnown RBP2.09□□□□□ -2.07
RPL40BYKR094C APL4Q12028 832 aa2.09□□□□□ -2.07
RPL40BYKR094C ATR1P13090 542 aa2.08□□□□□ -2.08
RPL40BYKR094C SIM1P40472 476 aa2.08□□□□□ -2.08
RPL40BYKR094C RPS10BP46784 105 aaKnown RBP2.08□□□□□ -2.08
RPL40BYKR094C DPB11P47027 764 aaPredicted RBP2.08□□□□□ -2.08
RPL40BYKR094C YPL014WQ02606 381 aa2.08□□□□□ -2.08
RPL40BYKR094C ENT4Q07872 247 aa2.08□□□□□ -2.08
RPL40BYKR094C TY2A-LR1P0C2J4 438 aa2.07□□□□□ -2.08
RPL40BYKR094C TY2A-FP0CX61 438 aa2.07□□□□□ -2.08
RPL40BYKR094C TY2A-GR2P0CX62 438 aa2.07□□□□□ -2.08
RPL40BYKR094C TY2A-CP25383 438 aa2.07□□□□□ -2.08
RPL40BYKR094C ROT2P38138 954 aa2.07□□□□□ -2.08
RPL40BYKR094C NDT80P38830 627 aa2.07□□□□□ -2.08
RPL40BYKR094C YGR210CP42942 411 aa2.07□□□□□ -2.08
RPL40BYKR094C YVH1Q02256 364 aaKnown RBP2.07□□□□□ -2.08
RPL40BYKR094C TY2A-DR2Q03483 438 aa2.07□□□□□ -2.08
RPL40BYKR094C TMS1Q12116 473 aa2.07□□□□□ -2.08
RPL40BYKR094C TY2A-BQ12260 438 aa2.07□□□□□ -2.08
RPL40BYKR094C COX17Q12287 69 aa2.07□□□□□ -2.08
RPL40BYKR094C TY2A-OR2Q12293 438 aa2.07□□□□□ -2.08
RPL40BYKR094C HRT3Q12347 344 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms