RNA–Protein interactions for RNA: YKL110C

KTI12, Transcript of Protein that plays a role in modification of tRNA wobble nucleosides, yeast

Gene KTI12, Length 942 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KTI12	YKL110C	PRC1	P00729	532 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	ATP1	P07251	545 aa	Known RBP	5.1	□□□□□ -1.59
KTI12	YKL110C	ATP12	P22135	325 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	MEF1	P25039	761 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	SNT1	P25357	1226 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	MSH2	P25847	964 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	BEM1	P29366	551 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	NDI1	P32340	513 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	HEM12	P32347	362 aa	Predicted RBP	5.1	□□□□□ -1.59
KTI12	YKL110C	PHA2	P32452	334 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	VPH1	P32563	840 aa	Known RBP	5.1	□□□□□ -1.59
KTI12	YKL110C	TOA1	P32773	286 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	PEX5	P35056	612 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	SEC31	P38968	1273 aa	Known RBP	5.1	□□□□□ -1.59
KTI12	YKL110C	ROK1	P45818	564 aa	Predicted RBP	5.1	□□□□□ -1.59
KTI12	YKL110C	YJL132W	P47014	750 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	RTT101	P47050	842 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	MRX6	P48564	524 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	MET14	Q02196	202 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	LGE1	Q02796	332 aa	Known RBP	5.1	□□□□□ -1.59
KTI12	YKL110C	RLI1	Q03195	608 aa	Known RBP	5.1	□□□□□ -1.59
KTI12	YKL110C	TAF11	Q04226	346 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	GLO2	Q05584	274 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	FAR10	Q06001	478 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	ECM30	Q06673	1274 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	ADY3	Q07732	790 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	DIA2	Q08496	732 aa	Predicted RBP	5.1	□□□□□ -1.59
KTI12	YKL110C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
KTI12	YKL110C	YPR202W	Q08993	238 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	NDJ1	Q12366	352 aa		5.1	□□□□□ -1.59
KTI12	YKL110C	STE2	D6VTK4	431 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	YPR089W	O13585	888 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	HIP1	P06775	603 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	ARD1	P07347	238 aa	Predicted RBP	5.09	□□□□□ -1.59
KTI12	YKL110C	MPH2	P0CD99	609 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	MSD1	P15179	658 aa	Known RBP	5.09	□□□□□ -1.59
KTI12	YKL110C	REC107	P21651	314 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	PGS1	P25578	521 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	DGR2	P32330	852 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	RIM1	P32445	135 aa	Known RBP	5.09	□□□□□ -1.59
KTI12	YKL110C	ASK1	P35734	292 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	YKR051W	P36142	418 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	TRM5	P38793	499 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	YIR016W	P40572	265 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	MDJ2	P42834	146 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	VPS25	P47142	202 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	STR3	P53101	465 aa	Known RBP	5.09	□□□□□ -1.59
KTI12	YKL110C	ERP6	P53198	216 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	RCF2	P53721	224 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	DMA2	P53924	522 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	SIW14	P53965	281 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	CDC14	Q00684	551 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	NUP100	Q02629	959 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	ATP25	Q03153	612 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	TRS31	Q03337	283 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	ACL4	Q03771	387 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	YDR132C	Q03900	495 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	GTB1	Q04924	702 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	YCS4	Q06156	1176 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	GPN2	Q08726	347 aa	Predicted RBP	5.09	□□□□□ -1.59
KTI12	YKL110C	SVS1	Q12254	260 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	YPL247C	Q12523	523 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	YLR149C	Q99296	730 aa		5.09	□□□□□ -1.59
KTI12	YKL110C	MAS1	P10507	462 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	NSP1	P14907	823 aa	Known RBP	5.08	□□□□□ -1.6
KTI12	YKL110C	AMD1	P15274	810 aa	Known RBP	5.08	□□□□□ -1.6
KTI12	YKL110C	KGD2	P19262	463 aa	Predicted RBP	5.08	□□□□□ -1.6
KTI12	YKL110C	CLN1	P20437	546 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	AMD2	P22580	549 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	PHO3	P24031	467 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	SPS22	P25380	463 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	KAR9	P32526	644 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	MRP21	P38175	177 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	ECM13	P38195	257 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	KAP104	P38217	918 aa	Known RBP	5.08	□□□□□ -1.6
KTI12	YKL110C	YHR182W	P38870	785 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	SHU2	P38957	223 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	TAT2	P38967	592 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
KTI12	YKL110C	MNN1	P39106	762 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	PRM2	P40534	656 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	FAF1	P40546	346 aa	Predicted RBP	5.08	□□□□□ -1.6
KTI12	YKL110C	ARC1	P46672	376 aa	Known RBP	5.08	□□□□□ -1.6
KTI12	YKL110C	ILM1	P47155	203 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	AMA1	P50082	593 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	MIG2	P53035	382 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	TAN1	P53072	289 aa	Predicted RBP	5.08	□□□□□ -1.6
KTI12	YKL110C	COQ6	P53318	479 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	IST1	P53843	298 aa	Predicted RBP	5.08	□□□□□ -1.6
KTI12	YKL110C	YDR131C	Q03899	556 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	EMI2	Q04409	500 aa	Known RBP	5.08	□□□□□ -1.6
KTI12	YKL110C	ECM38	Q05902	660 aa	Predicted RBP	5.08	□□□□□ -1.6
KTI12	YKL110C	CRN1	Q06440	651 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	TRE2	Q08693	809 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	PGC1	Q08959	321 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	YPQ1	Q12010	308 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	MRH1	Q12117	320 aa	Predicted RBP	5.08	□□□□□ -1.6
KTI12	YKL110C	UBX3	Q12229	455 aa		5.08	□□□□□ -1.6
KTI12	YKL110C	RPL24A	P04449	155 aa	Known RBP	5.07	□□□□□ -1.6
KTI12	YKL110C	RHO2	P06781	192 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms