RNA–Protein interactions for RNA: YDR313C

PIB1, Transcript of RING-type ubiquitin ligase of the endosomal and vacuolar membranes, yeast

Gene PIB1, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIB1	YDR313C	TPM2	P40414	161 aa		4.28	□□□□□ -1.72
PIB1	YDR313C	ZDS2	P54786	942 aa		4.28	□□□□□ -1.72
PIB1	YDR313C	VMS1	Q04311	632 aa	Known RBP	4.28	□□□□□ -1.72
PIB1	YDR313C	VID22	Q05934	901 aa		4.28	□□□□□ -1.72
PIB1	YDR313C	DAP1	Q12091	152 aa		4.28	□□□□□ -1.72
PIB1	YDR313C	TIP41	Q12199	356 aa		4.28	□□□□□ -1.72
PIB1	YDR313C	SNF1	P06782	633 aa	Known RBP	4.27	□□□□□ -1.73
PIB1	YDR313C	GLN3	P18494	730 aa		4.27	□□□□□ -1.73
PIB1	YDR313C	MRS6	P32864	603 aa	Known RBP	4.27	□□□□□ -1.73
PIB1	YDR313C	ARP1	P38696	384 aa		4.27	□□□□□ -1.73
PIB1	YDR313C	UBA4	P38820	440 aa		4.27	□□□□□ -1.73
PIB1	YDR313C	PSD1	P39006	500 aa		4.27	□□□□□ -1.73
PIB1	YDR313C	SLZ1	P40167	298 aa		4.27	□□□□□ -1.73
PIB1	YDR313C	SEC24	P40482	926 aa	Known RBP	4.27	□□□□□ -1.73
PIB1	YDR313C	AZF1	P41696	914 aa		4.27	□□□□□ -1.73
PIB1	YDR313C	GUF1	P46943	645 aa		4.27	□□□□□ -1.73
PIB1	YDR313C	SOL4	P53315	255 aa		4.27	□□□□□ -1.73
PIB1	YDR313C	ETT1	Q08421	412 aa	Known RBP	4.27	□□□□□ -1.73
PIB1	YDR313C	TRM8	Q12009	286 aa		4.27	□□□□□ -1.73
PIB1	YDR313C	LCB1	P25045	558 aa	Known RBP	4.26	□□□□□ -1.73
PIB1	YDR313C	PRO3	P32263	286 aa	Known RBP	4.26	□□□□□ -1.73
PIB1	YDR313C	PDB1	P32473	366 aa	Known RBP	4.26	□□□□□ -1.73
PIB1	YDR313C	PHD1	P36093	366 aa		4.26	□□□□□ -1.73
PIB1	YDR313C	IES5	P40060	125 aa		4.26	□□□□□ -1.73
PIB1	YDR313C	KAP123	P40069	1113 aa	Known RBP	4.26	□□□□□ -1.73
PIB1	YDR313C	BNA1	P47096	177 aa		4.26	□□□□□ -1.73
PIB1	YDR313C	YGR021W	P53212	290 aa		4.26	□□□□□ -1.73
PIB1	YDR313C	SKG3	Q06315	1026 aa		4.26	□□□□□ -1.73
PIB1	YDR313C	YEH2	Q07950	538 aa		4.26	□□□□□ -1.73
PIB1	YDR313C	CSR2	Q12734	1121 aa		4.26	□□□□□ -1.73
PIB1	YDR313C	YBR298C-A	Q8TGK4	73 aa		4.26	□□□□□ -1.73
PIB1	YDR313C	PGS1	P25578	521 aa		4.25	□□□□□ -1.73
PIB1	YDR313C	SNC1	P31109	117 aa		4.25	□□□□□ -1.73
PIB1	YDR313C	MRP20	P32387	263 aa		4.25	□□□□□ -1.73
PIB1	YDR313C	ERG1	P32476	496 aa	Known RBP	4.25	□□□□□ -1.73
PIB1	YDR313C	YTA12	P40341	825 aa		4.25	□□□□□ -1.73
PIB1	YDR313C	SGM1	P47166	707 aa		4.25	□□□□□ -1.73
PIB1	YDR313C	PKP2	P53170	491 aa		4.25	□□□□□ -1.73
PIB1	YDR313C	PIL1	P53252	339 aa	Known RBP	4.25	□□□□□ -1.73
PIB1	YDR313C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
PIB1	YDR313C	IMP4	P53941	290 aa	Known RBP	4.25	□□□□□ -1.73
PIB1	YDR313C	TMA64	Q04600	565 aa	Known RBP	4.25	□□□□□ -1.73
PIB1	YDR313C	ADE13	Q05911	482 aa	Known RBP	4.25	□□□□□ -1.73
PIB1	YDR313C	RDR1	Q08904	546 aa		4.25	□□□□□ -1.73
PIB1	YDR313C	CMK1	P27466	446 aa	Known RBP	4.24	□□□□□ -1.73
PIB1	YDR313C	CBF2	P32504	956 aa		4.24	□□□□□ -1.73
PIB1	YDR313C	YER010C	P40011	234 aa		4.24	□□□□□ -1.73
PIB1	YDR313C	YJL068C	P40363	299 aa		4.24	□□□□□ -1.73
PIB1	YDR313C	AAD10	P47182	288 aa		4.24	□□□□□ -1.73
PIB1	YDR313C	GTR1	Q00582	310 aa		4.24	□□□□□ -1.73
PIB1	YDR313C	PPT2	Q12036	173 aa		4.24	□□□□□ -1.73
PIB1	YDR313C	CYB2	P00175	591 aa		4.23	□□□□□ -1.73
PIB1	YDR313C	ARG81	P05085	880 aa		4.23	□□□□□ -1.73
PIB1	YDR313C	MCM4	P30665	933 aa	Known RBP	4.23	□□□□□ -1.73
PIB1	YDR313C	SLC1	P33333	303 aa		4.23	□□□□□ -1.73
PIB1	YDR313C	DHH1	P39517	506 aa	Known RBP	4.23	□□□□□ -1.73
PIB1	YDR313C	ROK1	P45818	564 aa	Predicted RBP	4.23	□□□□□ -1.73
PIB1	YDR313C	STR3	P53101	465 aa	Known RBP	4.23	□□□□□ -1.73
PIB1	YDR313C	YGL082W	P53155	381 aa		4.23	□□□□□ -1.73
PIB1	YDR313C	ATG16	Q03818	150 aa		4.23	□□□□□ -1.73
PIB1	YDR313C	MSS11	Q03825	758 aa		4.23	□□□□□ -1.73
PIB1	YDR313C	PSR1	Q07800	427 aa		4.23	□□□□□ -1.73
PIB1	YDR313C	YOL159C	Q08300	171 aa		4.23	□□□□□ -1.73
PIB1	YDR313C	PUT2	P07275	575 aa		4.22	□□□□□ -1.73
PIB1	YDR313C	PDA1	P16387	420 aa	Known RBP	4.22	□□□□□ -1.73
PIB1	YDR313C	TYR1	P20049	452 aa		4.22	□□□□□ -1.73
PIB1	YDR313C	ADH7	P25377	361 aa		4.22	□□□□□ -1.73
PIB1	YDR313C	ALY1	P36117	915 aa		4.22	□□□□□ -1.73
PIB1	YDR313C	TSC10	P38342	320 aa		4.22	□□□□□ -1.73
PIB1	YDR313C	DBP8	P38719	431 aa		4.22	□□□□□ -1.73
PIB1	YDR313C	ERG26	P53199	349 aa	Known RBP	4.22	□□□□□ -1.73
PIB1	YDR313C	EMI2	Q04409	500 aa	Known RBP	4.22	□□□□□ -1.73
PIB1	YDR313C	HCR1	Q05775	265 aa	Known RBP	4.22	□□□□□ -1.73
PIB1	YDR313C	YOL087C	Q99247	1116 aa		4.22	□□□□□ -1.73
PIB1	YDR313C	SNF3	P10870	884 aa		4.21	□□□□□ -1.74
PIB1	YDR313C	PWP2	P25635	923 aa	Known RBP	4.21	□□□□□ -1.74
PIB1	YDR313C	LAG1	P38703	411 aa		4.21	□□□□□ -1.74
PIB1	YDR313C	MDM31	P38880	579 aa		4.21	□□□□□ -1.74
PIB1	YDR313C	YER130C	P39959	443 aa		4.21	□□□□□ -1.74
PIB1	YDR313C	BUR6	P40096	142 aa		4.21	□□□□□ -1.74
PIB1	YDR313C	TDA7	P53882	636 aa	Predicted RBP	4.21	□□□□□ -1.74
PIB1	YDR313C	INN1	P53901	409 aa		4.21	□□□□□ -1.74
PIB1	YDR313C	RPM2	Q02773	1202 aa		4.21	□□□□□ -1.74
PIB1	YDR313C	SSK1	Q07084	712 aa		4.21	□□□□□ -1.74
PIB1	YDR313C	LEU9	Q12166	604 aa	Known RBP	4.21	□□□□□ -1.74
PIB1	YDR313C	PRP16	P15938	1071 aa	Predicted RBP	4.2	□□□□□ -1.74
PIB1	YDR313C	ACH1	P32316	526 aa		4.2	□□□□□ -1.74
PIB1	YDR313C	YNK1	P36010	153 aa	Known RBP	4.2	□□□□□ -1.74
PIB1	YDR313C	VPS24	P36095	224 aa	Known RBP	4.2	□□□□□ -1.74
PIB1	YDR313C	KTR3	P38130	404 aa	Predicted RBP	4.2	□□□□□ -1.74
PIB1	YDR313C	RTS1	P38903	757 aa		4.2	□□□□□ -1.74
PIB1	YDR313C	ELO1	P39540	310 aa		4.2	□□□□□ -1.74
PIB1	YDR313C	AXL1	P40851	1208 aa		4.2	□□□□□ -1.74
PIB1	YDR313C	YJR008W	P47085	338 aa		4.2	□□□□□ -1.74
PIB1	YDR313C	DIA3	P52290	468 aa		4.2	□□□□□ -1.74
PIB1	YDR313C	PYK2	P52489	506 aa	Known RBP	4.2	□□□□□ -1.74
PIB1	YDR313C	YMR160W	Q03823	816 aa		4.2	□□□□□ -1.74
PIB1	YDR313C	MRS3	P10566	314 aa		4.19	□□□□□ -1.74
PIB1	YDR313C	PWP1	P21304	576 aa	Known RBP	4.19	□□□□□ -1.74
PIB1	YDR313C	VMA16	P23968	213 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms