RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 MCM5P33992 734 aa11.03□□□□□ -0.64
PHGDH-228ENST00000641847 NEK4P51957 841 aa11.03□□□□□ -0.64
PHGDH-228ENST00000641847 ANTXR2P58335 489 aa11.03□□□□□ -0.64
PHGDH-228ENST00000641847 RTP1P59025 263 aa11.03□□□□□ -0.64
PHGDH-228ENST00000641847 CYB5R4Q7L1T6 521 aa11.03□□□□□ -0.64
PHGDH-228ENST00000641847 DHX32Q7L7V1 743 aaKnown RBP11.03□□□□□ -0.64
PHGDH-228ENST00000641847 CHST3Q7LGC8 479 aa11.03□□□□□ -0.64
PHGDH-228ENST00000641847 METTL16Q86W50 562 aaKnown RBP11.03□□□□□ -0.64
PHGDH-228ENST00000641847 FOXP4Q8IVH2 680 aaPredicted RBP11.03□□□□□ -0.64
PHGDH-228ENST00000641847 LPAR1Q92633 364 aa11.03□□□□□ -0.64
PHGDH-228ENST00000641847 TCEANC2Q96MN5 208 aa11.03□□□□□ -0.64
PHGDH-228ENST00000641847 APBA2Q99767 749 aa11.03□□□□□ -0.64
PHGDH-228ENST00000641847 TTYH1Q9H313 450 aaPredicted RBP11.03□□□□□ -0.64
PHGDH-228ENST00000641847 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.03□□□□□ -0.64
PHGDH-228ENST00000641847 PDRG1Q9NUG6 133 aa11.03□□□□□ -0.64
PHGDH-228ENST00000641847 RAPGEFL1Q9UHV5 662 aa11.03□□□□□ -0.64
PHGDH-228ENST00000641847 HERC5Q9UII4 1024 aaKnown RBP11.03□□□□□ -0.64
PHGDH-228ENST00000641847 RBM19Q9Y4C8 960 aaKnown RBP11.03□□□□□ -0.64
PHGDH-228ENST00000641847 GREB1LQ9C091 1923 aaPredicted RBP11.03□□□□□ -0.64
PHGDH-228ENST00000641847 PLIN4Q96Q06 1357 aa11.03□□□□□ -0.64
PHGDH-228ENST00000641847 TSPY2A6NKD2 308 aa11.02□□□□□ -0.65
PHGDH-228ENST00000641847 USP17L5A8MUK1 530 aa11.02□□□□□ -0.65
PHGDH-228ENST00000641847 ST18O60284 1047 aa11.02□□□□□ -0.65
PHGDH-228ENST00000641847 ANP32AP39687 249 aaKnown RBP11.02□□□□□ -0.65
PHGDH-228ENST00000641847 NT5C2P49902 561 aa11.02□□□□□ -0.65
PHGDH-228ENST00000641847 FAM47AQ5JRC9 791 aa11.02□□□□□ -0.65
PHGDH-228ENST00000641847 C9orf50Q5SZB4 431 aa11.02□□□□□ -0.65
PHGDH-228ENST00000641847 PLEKHH3Q7Z736 793 aa11.02□□□□□ -0.65
PHGDH-228ENST00000641847 ZNF444Q8N0Y2 327 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-228ENST00000641847 ARRDC4Q8NCT1 418 aa11.02□□□□□ -0.65
PHGDH-228ENST00000641847 RNPC3Q96LT9 517 aaKnown RBP11.02□□□□□ -0.65
PHGDH-228ENST00000641847 TTC14Q96N46 770 aa11.02□□□□□ -0.65
PHGDH-228ENST00000641847 C1QTNF1Q9BXJ1 281 aa11.02□□□□□ -0.65
PHGDH-228ENST00000641847 LRRC2Q9BYS8 371 aa11.02□□□□□ -0.65
PHGDH-228ENST00000641847 DDX20Q9UHI6 824 aaKnown RBP11.02□□□□□ -0.65
PHGDH-228ENST00000641847 WDR19Q8NEZ3 1342 aa11.02□□□□□ -0.65
PHGDH-228ENST00000641847 ATAD5Q96QE3 1844 aa11.02□□□□□ -0.65
PHGDH-228ENST00000641847 XIRP2A4UGR9 3374 aa11.02□□□□□ -0.65
PHGDH-228ENST00000641847 NCOR1O75376 2440 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 DOCK3Q8IZD9 2030 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 KBTBD13C9JR72 458 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 TSPY3P0CV98 308 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 TSPY8P0CW00 308 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 AKR1B1P15121 316 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 HOXD11P31277 338 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-228ENST00000641847 HERVK_113P62684 666 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 CCNA1P78396 465 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 FGD1P98174 961 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 TFAP4Q01664 338 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 TATDN1Q6P1N9 297 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 CCDC84Q86UT8 332 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-228ENST00000641847 ADAMTS19Q8TE59 1207 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 BADQ92934 168 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 GAS2L1Q99501 681 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-228ENST00000641847 UBAC1Q9BSL1 405 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 ZSWIM5Q9P217 1185 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 THEGQ9P2T0 379 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 HCN4Q9Y3Q4 1203 aa11.01□□□□□ -0.65
PHGDH-228ENST00000641847 DOCK1Q14185 1865 aa11□□□□□ -0.65
PHGDH-228ENST00000641847 MPHOSPH10O00566 681 aaKnown RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 SH2B2O14492 632 aaPredicted RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 IFIT3O14879 490 aaKnown RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 GDF11O95390 407 aa11□□□□□ -0.65
PHGDH-228ENST00000641847 CD2BP2O95400 341 aaKnown RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 HOXA7P31268 230 aaPredicted RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 AK2P54819 239 aa11□□□□□ -0.65
PHGDH-228ENST00000641847 ERVK-9P63128 1117 aa11□□□□□ -0.65
PHGDH-228ENST00000641847 ERVK-24P63145 666 aa11□□□□□ -0.65
PHGDH-228ENST00000641847 MRPS5P82675 430 aaKnown RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 EXOSC10Q01780 885 aaKnown RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 ATP2B2Q01814 1243 aa11□□□□□ -0.65
PHGDH-228ENST00000641847 SART3Q15020 963 aaKnown RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 CERKLQ49MI3 558 aaPredicted RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 SH3D19Q5HYK7 790 aa11□□□□□ -0.65
PHGDH-228ENST00000641847 Q6ZUG5 572 aa11□□□□□ -0.65
PHGDH-228ENST00000641847 NOL8Q76FK4 1167 aaKnown RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 GPR142Q7Z601 462 aa11□□□□□ -0.65
PHGDH-228ENST00000641847 IQCA1Q86XH1 822 aa11□□□□□ -0.65
PHGDH-228ENST00000641847 TMEM87BQ96K49 555 aa11□□□□□ -0.65
PHGDH-228ENST00000641847 ASB2Q96Q27 587 aa11□□□□□ -0.65
PHGDH-228ENST00000641847 ZSCAN10Q96SZ4 725 aaPredicted RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 UHRF1Q96T88 793 aaPredicted RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 P2RX7Q99572 595 aaKnown RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 ZKSCAN3Q9BRR0 538 aa11□□□□□ -0.65
PHGDH-228ENST00000641847 TSPYL2Q9H2G4 693 aaPredicted RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 RNF216Q9NWF9 866 aaPredicted RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 FRMD4AQ9P2Q2 1039 aaPredicted RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 ARIH1Q9Y4X5 557 aaPredicted RBP11□□□□□ -0.65
PHGDH-228ENST00000641847 TNKSO95271 1327 aa11□□□□□ -0.65
PHGDH-228ENST00000641847 ERICH2A1L162 156 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 C19orf81C9J6K1 198 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 NMT2O60551 498 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 CAP2P40123 477 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 BACE1P56817 501 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 MAP2K5Q13163 448 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 MTMR2Q13614 643 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 TOB2Q14106 344 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-228ENST00000641847 RRP1BQ14684 758 aaKnown RBP10.99□□□□□ -0.65
PHGDH-228ENST00000641847 GRIN2CQ14957 1233 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 ANKRD1Q15327 319 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms