RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 NAPAP54920 295 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 TTC38Q5R3I4 469 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 TYW1BQ6NUM6 668 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 PIGSQ96S52 555 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 UBA5Q9GZZ9 404 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 VAT1LQ9HCJ6 419 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 FBXO2Q9UK22 296 aaPredicted RBP18.81■□□□□ 0.6
PHGDH-216ENST00000641375 CNTNAP1P78357 1384 aa18.8■□□□□ 0.6
PHGDH-216ENST00000641375 M0R2N6 131 aa18.8■□□□□ 0.6
PHGDH-216ENST00000641375 WNT10BO00744 389 aa18.8■□□□□ 0.6
PHGDH-216ENST00000641375 SEPT2Q15019 361 aa18.8■□□□□ 0.6
PHGDH-216ENST00000641375 CLIC6Q96NY7 704 aa18.8■□□□□ 0.6
PHGDH-216ENST00000641375 C6orf50Q9HD87 102 aa18.8■□□□□ 0.6
PHGDH-216ENST00000641375 CCDC96Q2M329 555 aa18.79■□□□□ 0.6
PHGDH-216ENST00000641375 DCAF4Q8WV16 495 aa18.79■□□□□ 0.6
PHGDH-216ENST00000641375 GPCPD1Q9NPB8 672 aa18.79■□□□□ 0.6
PHGDH-216ENST00000641375 FAM13BQ9NYF5 915 aa18.79■□□□□ 0.6
PHGDH-216ENST00000641375 SYNPO2Q9UMS6 1093 aa18.79■□□□□ 0.6
PHGDH-216ENST00000641375 MRVI1Q9Y6F6 885 aa18.79■□□□□ 0.6
PHGDH-216ENST00000641375 CCDC194A0A1B0GVG4 234 aa18.79■□□□□ 0.6
PHGDH-216ENST00000641375 GDF11O95390 407 aa18.79■□□□□ 0.6
PHGDH-216ENST00000641375 ZNF280AP59817 542 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-216ENST00000641375 FERMT2Q96AC1 680 aa18.79■□□□□ 0.6
PHGDH-216ENST00000641375 ESYT2A0FGR8 921 aa18.78■□□□□ 0.6
PHGDH-216ENST00000641375 TBC1D12O60347 775 aa18.78■□□□□ 0.6
PHGDH-216ENST00000641375 TNNI2P48788 182 aa18.78■□□□□ 0.6
PHGDH-216ENST00000641375 FAM200AQ8TCP9 573 aa18.78■□□□□ 0.6
PHGDH-216ENST00000641375 PCDHA6Q9UN73 950 aa18.78■□□□□ 0.6
PHGDH-216ENST00000641375 PCDHA8Q9Y5H6 950 aa18.78■□□□□ 0.6
PHGDH-216ENST00000641375 PNMA6FA0A0J9YX94 578 aa18.78■□□□□ 0.6
PHGDH-216ENST00000641375 SMCO2A6NFE2 343 aa18.78■□□□□ 0.6
PHGDH-216ENST00000641375 FZD9O00144 591 aa18.78■□□□□ 0.6
PHGDH-216ENST00000641375 GH2P01242 217 aa18.78■□□□□ 0.6
PHGDH-216ENST00000641375 GMCL1P1Q8NEA9 526 aa18.78■□□□□ 0.6
PHGDH-216ENST00000641375 DPF2Q92785 391 aa18.78■□□□□ 0.6
PHGDH-216ENST00000641375 PPP1R9BQ96SB3 815 aa18.78■□□□□ 0.6
PHGDH-216ENST00000641375 CLCN1P35523 988 aa18.77■□□□□ 0.6
PHGDH-216ENST00000641375 SLC1A4P43007 532 aa18.77■□□□□ 0.6
PHGDH-216ENST00000641375 NBPF9Q3BBW0 867 aa18.77■□□□□ 0.6
PHGDH-216ENST00000641375 NOM1Q5C9Z4 860 aaKnown RBP18.77■□□□□ 0.6
PHGDH-216ENST00000641375 ADGRF4Q8IZF3 695 aa18.77■□□□□ 0.6
PHGDH-216ENST00000641375 JMJD4Q9H9V9 463 aa18.77■□□□□ 0.6
PHGDH-216ENST00000641375 KCNH3Q9ULD8 1083 aa18.77■□□□□ 0.6
PHGDH-216ENST00000641375 ATP2C1P98194 919 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-216ENST00000641375 RASSF7Q02833 373 aa18.76■□□□□ 0.59
PHGDH-216ENST00000641375 ZNF174Q15697 407 aa18.76■□□□□ 0.59
PHGDH-216ENST00000641375 SHROOM1Q2M3G4 852 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-216ENST00000641375 ANO6Q4KMQ2 910 aa18.76■□□□□ 0.59
PHGDH-216ENST00000641375 SLFN13Q68D06 897 aa18.76■□□□□ 0.59
PHGDH-216ENST00000641375 PPP1R18Q6NYC8 613 aa18.76■□□□□ 0.59
PHGDH-216ENST00000641375 KRT25Q7Z3Z0 450 aa18.76■□□□□ 0.59
PHGDH-216ENST00000641375 SIAH1Q8IUQ4 282 aa18.76■□□□□ 0.59
PHGDH-216ENST00000641375 NLGN2Q8NFZ4 835 aa18.76■□□□□ 0.59
PHGDH-216ENST00000641375 TNFAIP1Q13829 316 aa18.76■□□□□ 0.59
PHGDH-216ENST00000641375 STX1AQ16623 288 aa18.76■□□□□ 0.59
PHGDH-216ENST00000641375 KCTD1Q719H9 257 aa18.76■□□□□ 0.59
PHGDH-216ENST00000641375 TMEM39BQ9GZU3 492 aa18.76■□□□□ 0.59
PHGDH-216ENST00000641375 SPON1Q9HCB6 807 aa18.76■□□□□ 0.59
PHGDH-216ENST00000641375 ZBTB5O15062 677 aa18.75■□□□□ 0.59
PHGDH-216ENST00000641375 PTGDRQ13258 359 aa18.75■□□□□ 0.59
PHGDH-216ENST00000641375 GMCL1Q96IK5 515 aa18.75■□□□□ 0.59
PHGDH-216ENST00000641375 KIAA1468Q9P260 1216 aa18.75■□□□□ 0.59
PHGDH-216ENST00000641375 F5H6K3 240 aa18.75■□□□□ 0.59
PHGDH-216ENST00000641375 ADAMTS3O15072 1205 aa18.75■□□□□ 0.59
PHGDH-216ENST00000641375 RAD21O60216 631 aa18.75■□□□□ 0.59
PHGDH-216ENST00000641375 KLRC3Q07444 240 aa18.75■□□□□ 0.59
PHGDH-216ENST00000641375 ZRSR1Q15695 479 aaKnown RBP18.75■□□□□ 0.59
PHGDH-216ENST00000641375 ARL6IP4Q66PJ3 421 aaKnown RBP18.75■□□□□ 0.59
PHGDH-216ENST00000641375 ELOA2Q8IYF1 753 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-216ENST00000641375 RASGRP4Q8TDF6 673 aa18.75■□□□□ 0.59
PHGDH-216ENST00000641375 MTMR8Q96EF0 704 aa18.75■□□□□ 0.59
PHGDH-216ENST00000641375 ANO10Q9NW15 660 aa18.75■□□□□ 0.59
PHGDH-216ENST00000641375 WNT7AO00755 349 aa18.74■□□□□ 0.59
PHGDH-216ENST00000641375 RRP1BQ14684 758 aaKnown RBP18.74■□□□□ 0.59
PHGDH-216ENST00000641375 TTBK2Q6IQ55 1244 aa18.74■□□□□ 0.59
PHGDH-216ENST00000641375 PDLIM2Q96JY6 352 aa18.74■□□□□ 0.59
PHGDH-216ENST00000641375 CSRNP2Q9H175 543 aa18.74■□□□□ 0.59
PHGDH-216ENST00000641375 ARHGEF10LQ9HCE6 1279 aa18.74■□□□□ 0.59
PHGDH-216ENST00000641375 HOOK1Q9UJC3 728 aaKnown RBP18.74■□□□□ 0.59
PHGDH-216ENST00000641375 MCM7P33993 719 aa18.74■□□□□ 0.59
PHGDH-216ENST00000641375 GMPSP49915 693 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-216ENST00000641375 GRIN1Q05586 938 aa18.74■□□□□ 0.59
PHGDH-216ENST00000641375 REXO1Q8N1G1 1221 aaKnown RBP18.74■□□□□ 0.59
PHGDH-216ENST00000641375 SLC16A2P36021 539 aa18.73■□□□□ 0.59
PHGDH-216ENST00000641375 ZNF165P49910 485 aa18.73■□□□□ 0.59
PHGDH-216ENST00000641375 MAP3K10Q02779 954 aa18.73■□□□□ 0.59
PHGDH-216ENST00000641375 NONOQ15233 471 aaKnown RBP eCLIP18.73■□□□□ 0.59
PHGDH-216ENST00000641375 SPECC1Q5M775 1068 aa18.73■□□□□ 0.59
PHGDH-216ENST00000641375 KRBA2Q6ZNG9 492 aa18.73■□□□□ 0.59
PHGDH-216ENST00000641375 MICALL2Q8IY33 904 aa18.73■□□□□ 0.59
PHGDH-216ENST00000641375 CNNM3Q8NE01 707 aa18.73■□□□□ 0.59
PHGDH-216ENST00000641375 NAP1L5Q96NT1 182 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-216ENST00000641375 PGAP2Q9UHJ9 254 aa18.73■□□□□ 0.59
PHGDH-216ENST00000641375 GJA3Q9Y6H8 435 aa18.73■□□□□ 0.59
PHGDH-216ENST00000641375 SHTN1A0MZ66 631 aa18.72■□□□□ 0.59
PHGDH-216ENST00000641375 ADCY7P51828 1080 aa18.72■□□□□ 0.59
PHGDH-216ENST00000641375 JAG1P78504 1218 aa18.72■□□□□ 0.59
PHGDH-216ENST00000641375 TRIM44Q96DX7 344 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-216ENST00000641375 DNAJC25Q9H1X3 360 aa18.72■□□□□ 0.59
PHGDH-216ENST00000641375 CNOT7Q9UIV1 285 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms