RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 PLIN4Q96Q06 1357 aa19.92■□□□□ 0.78
PHGDH-213ENST00000641272 ERC2O15083 957 aa19.91■□□□□ 0.78
PHGDH-213ENST00000641272 MX1P20591 662 aa19.91■□□□□ 0.78
PHGDH-213ENST00000641272 COPB2P35606 906 aa19.91■□□□□ 0.78
PHGDH-213ENST00000641272 ZNF444Q8N0Y2 327 aaPredicted RBP19.91■□□□□ 0.78
PHGDH-213ENST00000641272 PDLIM7Q9NR12 457 aa19.91■□□□□ 0.78
PHGDH-213ENST00000641272 ZHX1Q9UKY1 873 aaPredicted RBP19.91■□□□□ 0.78
PHGDH-213ENST00000641272 CTDP1Q9Y5B0 961 aaPredicted RBP19.91■□□□□ 0.78
PHGDH-213ENST00000641272 TSPY3P0CV98 308 aa19.9■□□□□ 0.78
PHGDH-213ENST00000641272 TSPY8P0CW00 308 aa19.9■□□□□ 0.78
PHGDH-213ENST00000641272 RRP1P56182 461 aaKnown RBP19.9■□□□□ 0.78
PHGDH-213ENST00000641272 DDX11Q96FC9 970 aa19.9■□□□□ 0.78
PHGDH-213ENST00000641272 NACAP1Q9BZK3 213 aa19.9■□□□□ 0.78
PHGDH-213ENST00000641272 MTMR4Q9NYA4 1195 aa19.9■□□□□ 0.78
PHGDH-213ENST00000641272 CNPY2Q9Y2B0 182 aa19.9■□□□□ 0.78
PHGDH-213ENST00000641272 LRRC37A2A6NM11 1700 aa19.9■□□□□ 0.78
PHGDH-213ENST00000641272 PATL2C9JE40 543 aaKnown RBP19.89■□□□□ 0.77
PHGDH-213ENST00000641272 TTLL1O95922 423 aa19.89■□□□□ 0.77
PHGDH-213ENST00000641272 ZNF865P0CJ78 1059 aaPredicted RBP19.89■□□□□ 0.77
PHGDH-213ENST00000641272 SNX17Q15036 470 aa19.89■□□□□ 0.77
PHGDH-213ENST00000641272 LRRFIP1Q32MZ4 808 aaKnown RBP19.89■□□□□ 0.77
PHGDH-213ENST00000641272 ZMYM1Q5SVZ6 1142 aa19.89■□□□□ 0.77
PHGDH-213ENST00000641272 RASGRP2Q7LDG7 609 aa19.89■□□□□ 0.77
PHGDH-213ENST00000641272 SH3RF1Q7Z6J0 888 aa19.89■□□□□ 0.77
PHGDH-213ENST00000641272 PRPF38AQ8NAV1 312 aaKnown RBP19.89■□□□□ 0.77
PHGDH-213ENST00000641272 SLC17A8Q8NDX2 589 aa19.89■□□□□ 0.77
PHGDH-213ENST00000641272 ZNF287Q9HBT7 754 aa19.89■□□□□ 0.77
PHGDH-213ENST00000641272 HOMER2Q9NSB8 354 aa19.89■□□□□ 0.77
PHGDH-213ENST00000641272 ZBED4O75132 1171 aa19.88■□□□□ 0.77
PHGDH-213ENST00000641272 AKR1A1P14550 325 aa19.88■□□□□ 0.77
PHGDH-213ENST00000641272 CTDSPL2Q05D32 466 aa19.88■□□□□ 0.77
PHGDH-213ENST00000641272 PPARAQ07869 468 aa19.88■□□□□ 0.77
PHGDH-213ENST00000641272 SLFN13Q68D06 897 aa19.88■□□□□ 0.77
PHGDH-213ENST00000641272 BADQ92934 168 aa19.88■□□□□ 0.77
PHGDH-213ENST00000641272 FAM161BQ96MY7 647 aa19.88■□□□□ 0.77
PHGDH-213ENST00000641272 CRBNQ96SW2 442 aa19.88■□□□□ 0.77
PHGDH-213ENST00000641272 MTMR10Q9NXD2 777 aa19.88■□□□□ 0.77
PHGDH-213ENST00000641272 NRBP1Q9UHY1 535 aa19.88■□□□□ 0.77
PHGDH-213ENST00000641272 PHF24Q9UPV7 400 aa19.88■□□□□ 0.77
PHGDH-213ENST00000641272 DIS3Q9Y2L1 958 aaKnown RBP19.88■□□□□ 0.77
PHGDH-213ENST00000641272 COL6A3P12111 3177 aa19.88■□□□□ 0.77
PHGDH-213ENST00000641272 SALL3Q9BXA9 1300 aa19.87■□□□□ 0.77
PHGDH-213ENST00000641272 SYNRGQ9UMZ2 1314 aa19.87■□□□□ 0.77
PHGDH-213ENST00000641272 A0A1W2PQ45 241 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-213ENST00000641272 A0A1W2PQY0 241 aa19.87■□□□□ 0.77
PHGDH-213ENST00000641272 TRIM43BA6NCK2 446 aa19.87■□□□□ 0.77
PHGDH-213ENST00000641272 FOXP2O15409 715 aa19.87■□□□□ 0.77
PHGDH-213ENST00000641272 BMP3P12645 472 aa19.87■□□□□ 0.77
PHGDH-213ENST00000641272 IRX5P78411 483 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-213ENST00000641272 TFAP4Q01664 338 aa19.87■□□□□ 0.77
PHGDH-213ENST00000641272 PDE4BQ07343 736 aa19.87■□□□□ 0.77
PHGDH-213ENST00000641272 IKQ13123 557 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-213ENST00000641272 C9orf50Q5SZB4 431 aa19.87■□□□□ 0.77
PHGDH-213ENST00000641272 GPR153Q6NV75 609 aa19.87■□□□□ 0.77
PHGDH-213ENST00000641272 RNF180Q86T96 592 aa19.87■□□□□ 0.77
PHGDH-213ENST00000641272 NEDD1Q8NHV4 660 aa19.87■□□□□ 0.77
PHGDH-213ENST00000641272 TRIM43Q96BQ3 446 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-213ENST00000641272 SLC38A10Q9HBR0 1119 aa19.87■□□□□ 0.77
PHGDH-213ENST00000641272 MTMR7Q9Y216 660 aa19.87■□□□□ 0.77
PHGDH-213ENST00000641272 MYADML2A6NDP7 307 aa19.86■□□□□ 0.77
PHGDH-213ENST00000641272 PQBP1O60828 265 aaKnown RBP19.86■□□□□ 0.77
PHGDH-213ENST00000641272 ADAMTS4O75173 837 aa19.86■□□□□ 0.77
PHGDH-213ENST00000641272 TLE2Q04725 743 aa19.86■□□□□ 0.77
PHGDH-213ENST00000641272 ANKRD35Q8N283 1001 aa19.86■□□□□ 0.77
PHGDH-213ENST00000641272 GMCL1P1Q8NEA9 526 aa19.86■□□□□ 0.77
PHGDH-213ENST00000641272 FGD4Q96M96 766 aa19.86■□□□□ 0.77
PHGDH-213ENST00000641272 INCENPQ9NQS7 918 aa19.86■□□□□ 0.77
PHGDH-213ENST00000641272 FEM1BQ9UK73 627 aa19.86■□□□□ 0.77
PHGDH-213ENST00000641272 SYNGAP1Q96PV0 1343 aa19.85■□□□□ 0.77
PHGDH-213ENST00000641272 DNAJC25-GNG10A0A024R161 153 aa19.85■□□□□ 0.77
PHGDH-213ENST00000641272 TMEM232C9JQI7 657 aa19.85■□□□□ 0.77
PHGDH-213ENST00000641272 NMT2O60551 498 aa19.85■□□□□ 0.77
PHGDH-213ENST00000641272 SNAI1O95863 264 aaPredicted RBP19.85■□□□□ 0.77
PHGDH-213ENST00000641272 SLC3A2P08195 630 aaKnown RBP19.85■□□□□ 0.77
PHGDH-213ENST00000641272 SHHQ15465 462 aa19.85■□□□□ 0.77
PHGDH-213ENST00000641272 VPS53Q5VIR6 699 aa19.85■□□□□ 0.77
PHGDH-213ENST00000641272 MKL1Q969V6 931 aa19.85■□□□□ 0.77
PHGDH-213ENST00000641272 LCTP09848 1927 aa19.84■□□□□ 0.77
PHGDH-213ENST00000641272 ATP2A1O14983 1001 aa19.84■□□□□ 0.77
PHGDH-213ENST00000641272 ADCY6O43306 1168 aa19.84■□□□□ 0.77
PHGDH-213ENST00000641272 SNAP25P60880 206 aa19.84■□□□□ 0.77
PHGDH-213ENST00000641272 ANKRD45Q5TZF3 282 aa19.84■□□□□ 0.77
PHGDH-213ENST00000641272 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.84■□□□□ 0.77
PHGDH-213ENST00000641272 ZBTB47Q9UFB7 747 aaPredicted RBP19.84■□□□□ 0.77
PHGDH-213ENST00000641272 STX8Q9UNK0 236 aa19.84■□□□□ 0.77
PHGDH-213ENST00000641272 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.84■□□□□ 0.77
PHGDH-213ENST00000641272 TACC3Q9Y6A5 838 aa19.84■□□□□ 0.77
PHGDH-213ENST00000641272 TSPY2A6NKD2 308 aa19.83■□□□□ 0.77
PHGDH-213ENST00000641272 CLTBP09497 229 aa19.83■□□□□ 0.77
PHGDH-213ENST00000641272 ITGB8P26012 769 aa19.83■□□□□ 0.77
PHGDH-213ENST00000641272 SLC1A4P43007 532 aa19.83■□□□□ 0.77
PHGDH-213ENST00000641272 STAT2P52630 851 aa19.83■□□□□ 0.77
PHGDH-213ENST00000641272 CNTN2Q02246 1040 aa19.83■□□□□ 0.77
PHGDH-213ENST00000641272 KCTD1Q719H9 257 aa19.83■□□□□ 0.77
PHGDH-213ENST00000641272 STARD7Q9NQZ5 370 aa19.83■□□□□ 0.77
PHGDH-213ENST00000641272 FAM184BQ9ULE4 1060 aa19.83■□□□□ 0.77
PHGDH-213ENST00000641272 MCCP23508 829 aa19.82■□□□□ 0.76
PHGDH-213ENST00000641272 ACLYP53396 1101 aa19.82■□□□□ 0.76
PHGDH-213ENST00000641272 CCDC174Q6PII3 467 aa19.82■□□□□ 0.76
PHGDH-213ENST00000641272 ARMCX2Q7L311 632 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms