RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 PCDHA8Q9Y5H6 950 aa19.74■□□□□ 0.75
PHGDH-208ENST00000641023 SMCO2A6NFE2 343 aa19.74■□□□□ 0.75
PHGDH-208ENST00000641023 ICA1Q05084 483 aa19.74■□□□□ 0.75
PHGDH-208ENST00000641023 GRIN1Q05586 938 aa19.74■□□□□ 0.75
PHGDH-208ENST00000641023 TNIP1Q15025 636 aa19.74■□□□□ 0.75
PHGDH-208ENST00000641023 SPECC1Q5M775 1068 aa19.74■□□□□ 0.75
PHGDH-208ENST00000641023 RBM26Q5T8P6 1007 aaKnown RBP19.74■□□□□ 0.75
PHGDH-208ENST00000641023 CBX8Q9HC52 389 aa19.74■□□□□ 0.75
PHGDH-208ENST00000641023 BCS1LQ9Y276 419 aa19.74■□□□□ 0.75
PHGDH-208ENST00000641023 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.73■□□□□ 0.75
PHGDH-208ENST00000641023 MMP14P50281 582 aa19.73■□□□□ 0.75
PHGDH-208ENST00000641023 ATP2C1P98194 919 aaPredicted RBP19.73■□□□□ 0.75
PHGDH-208ENST00000641023 PTGDRQ13258 359 aa19.73■□□□□ 0.75
PHGDH-208ENST00000641023 CCDC96Q2M329 555 aa19.73■□□□□ 0.75
PHGDH-208ENST00000641023 CNNM3Q8NE01 707 aa19.73■□□□□ 0.75
PHGDH-208ENST00000641023 CSRNP2Q9H175 543 aa19.73■□□□□ 0.75
PHGDH-208ENST00000641023 HOOK1Q9UJC3 728 aaKnown RBP19.73■□□□□ 0.75
PHGDH-208ENST00000641023 SEPT2Q15019 361 aa19.72■□□□□ 0.75
PHGDH-208ENST00000641023 KRBA2Q6ZNG9 492 aa19.72■□□□□ 0.75
PHGDH-208ENST00000641023 LUZP1Q86V48 1076 aa19.72■□□□□ 0.75
PHGDH-208ENST00000641023 ELOA2Q8IYF1 753 aaPredicted RBP19.72■□□□□ 0.75
PHGDH-208ENST00000641023 ERCC4Q92889 916 aaPredicted RBP19.72■□□□□ 0.75
PHGDH-208ENST00000641023 NAT10Q9H0A0 1025 aaKnown RBP19.72■□□□□ 0.75
PHGDH-208ENST00000641023 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.72■□□□□ 0.752e-7■■■■□ 19.6
PHGDH-208ENST00000641023 VEZTQ9HBM0 779 aa19.72■□□□□ 0.75
PHGDH-208ENST00000641023 ESYT2A0FGR8 921 aa19.72■□□□□ 0.75
PHGDH-208ENST00000641023 NFKBIEO00221 500 aa19.72■□□□□ 0.75
PHGDH-208ENST00000641023 WNT7AO00755 349 aa19.72■□□□□ 0.75
PHGDH-208ENST00000641023 ADAMTS3O15072 1205 aa19.72■□□□□ 0.75
PHGDH-208ENST00000641023 GDF11O95390 407 aa19.72■□□□□ 0.75
PHGDH-208ENST00000641023 MCM7P33993 719 aa19.72■□□□□ 0.75
PHGDH-208ENST00000641023 LONRF3Q496Y0 759 aa19.72■□□□□ 0.75
PHGDH-208ENST00000641023 RASGRP4Q8TDF6 673 aa19.72■□□□□ 0.75
PHGDH-208ENST00000641023 SLC1A4P43007 532 aa19.71■□□□□ 0.75
PHGDH-208ENST00000641023 PLCB2Q00722 1185 aa19.71■□□□□ 0.75
PHGDH-208ENST00000641023 ADGRF4Q8IZF3 695 aa19.71■□□□□ 0.75
PHGDH-208ENST00000641023 DCAF4Q8WV16 495 aa19.71■□□□□ 0.75
PHGDH-208ENST00000641023 FER1L6Q2WGJ9 1857 aa19.71■□□□□ 0.75
PHGDH-208ENST00000641023 PNMA6FA0A0J9YX94 578 aa19.71■□□□□ 0.75
PHGDH-208ENST00000641023 RAD21O60216 631 aa19.71■□□□□ 0.75
PHGDH-208ENST00000641023 ADCY5O95622 1261 aa19.71■□□□□ 0.75
PHGDH-208ENST00000641023 HS1BP3Q53T59 392 aa19.71■□□□□ 0.75
PHGDH-208ENST00000641023 KCTD1Q719H9 257 aa19.71■□□□□ 0.75
PHGDH-208ENST00000641023 KRT25Q7Z3Z0 450 aa19.71■□□□□ 0.75
PHGDH-208ENST00000641023 FAM83AQ86UY5 434 aa19.71■□□□□ 0.75
PHGDH-208ENST00000641023 CEP57L1Q8IYX8 460 aa19.71■□□□□ 0.75
PHGDH-208ENST00000641023 JMJD4Q9H9V9 463 aa19.71■□□□□ 0.75
PHGDH-208ENST00000641023 BRCA1P38398 1863 aaKnown RBP19.7■□□□□ 0.74
PHGDH-208ENST00000641023 POLR2DO15514 142 aaKnown RBP19.7■□□□□ 0.74
PHGDH-208ENST00000641023 ARL6IP4Q66PJ3 421 aaKnown RBP19.7■□□□□ 0.74
PHGDH-208ENST00000641023 SLFN13Q68D06 897 aa19.7■□□□□ 0.74
PHGDH-208ENST00000641023 CCDC34Q96HJ3 373 aa19.7■□□□□ 0.74
PHGDH-208ENST00000641023 MYH4Q9Y623 1939 aa19.7■□□□□ 0.74
PHGDH-208ENST00000641023 GH2P01242 217 aa19.69■□□□□ 0.74
PHGDH-208ENST00000641023 RPS12P25398 132 aaKnown RBP19.69■□□□□ 0.74
PHGDH-208ENST00000641023 SHROOM1Q2M3G4 852 aaPredicted RBP19.69■□□□□ 0.74
PHGDH-208ENST00000641023 TTBK2Q6IQ55 1244 aa19.69■□□□□ 0.74
PHGDH-208ENST00000641023 KANK3Q6NY19 840 aa19.69■□□□□ 0.74
PHGDH-208ENST00000641023 SIAH1Q8IUQ4 282 aa19.69■□□□□ 0.74
PHGDH-208ENST00000641023 MYOZ2Q9NPC6 264 aa19.69■□□□□ 0.74
PHGDH-208ENST00000641023 LTBP3Q9NS15 1303 aa19.69■□□□□ 0.74
PHGDH-208ENST00000641023 VWA3AA6NCI4 1184 aa19.69■□□□□ 0.74
PHGDH-208ENST00000641023 GOLGA6L19H0YKK7 550 aa19.69■□□□□ 0.74
PHGDH-208ENST00000641023 WNT10BO00744 389 aa19.69■□□□□ 0.74
PHGDH-208ENST00000641023 INF2Q27J81 1249 aa19.69■□□□□ 0.74
PHGDH-208ENST00000641023 PPP1R18Q6NYC8 613 aa19.69■□□□□ 0.74
PHGDH-208ENST00000641023 C11orf57Q6ZUT1 292 aaPredicted RBP19.69■□□□□ 0.74
PHGDH-208ENST00000641023 GMCL1P1Q8NEA9 526 aa19.69■□□□□ 0.74
PHGDH-208ENST00000641023 ZBED3Q96IU2 234 aaPredicted RBP19.69■□□□□ 0.74
PHGDH-208ENST00000641023 CNTNAP1P78357 1384 aa19.69■□□□□ 0.74
PHGDH-208ENST00000641023 BECN2A8MW95 431 aa19.68■□□□□ 0.74
PHGDH-208ENST00000641023 F5H6K3 240 aa19.68■□□□□ 0.74
PHGDH-208ENST00000641023 ZBTB5O15062 677 aa19.68■□□□□ 0.74
PHGDH-208ENST00000641023 KLRC3Q07444 240 aa19.68■□□□□ 0.74
PHGDH-208ENST00000641023 NONOQ15233 471 aaKnown RBP eCLIP19.68■□□□□ 0.74
PHGDH-208ENST00000641023 REXO1Q8N1G1 1221 aaKnown RBP19.68■□□□□ 0.74
PHGDH-208ENST00000641023 UPF1Q92900 1129 aaKnown RBP eCLIP19.68■□□□□ 0.74
PHGDH-208ENST00000641023 TUBE1Q9UJT0 475 aa19.68■□□□□ 0.74
PHGDH-208ENST00000641023 SYNPO2Q9UMS6 1093 aa19.68■□□□□ 0.74
PHGDH-208ENST00000641023 TBC1D12O60347 775 aa19.67■□□□□ 0.74
PHGDH-208ENST00000641023 SLC16A2P36021 539 aa19.67■□□□□ 0.74
PHGDH-208ENST00000641023 PTGER2P43116 358 aa19.67■□□□□ 0.74
PHGDH-208ENST00000641023 COA7Q96BR5 231 aa19.67■□□□□ 0.74
PHGDH-208ENST00000641023 PSDA5PKW4 1024 aaPredicted RBP19.67■□□□□ 0.74
PHGDH-208ENST00000641023 LAD1O00515 517 aa19.67■□□□□ 0.74
PHGDH-208ENST00000641023 TNNI2P48788 182 aa19.67■□□□□ 0.74
PHGDH-208ENST00000641023 NLRP12P59046 1061 aa19.67■□□□□ 0.74
PHGDH-208ENST00000641023 PNOCQ13519 176 aa19.67■□□□□ 0.74
PHGDH-208ENST00000641023 IQCB1Q15051 598 aa19.67■□□□□ 0.74
PHGDH-208ENST00000641023 NBPF9Q3BBW0 867 aa19.67■□□□□ 0.74
PHGDH-208ENST00000641023 USP49Q70CQ1 688 aa19.67■□□□□ 0.74
PHGDH-208ENST00000641023 PDILTQ8N807 584 aa19.67■□□□□ 0.74
PHGDH-208ENST00000641023 SYMPKQ92797 1274 aaKnown RBP19.67■□□□□ 0.74
PHGDH-208ENST00000641023 MTMR8Q96EF0 704 aa19.67■□□□□ 0.74
PHGDH-208ENST00000641023 EPSTI1Q96J88 318 aa19.67■□□□□ 0.74
PHGDH-208ENST00000641023 ADCY7P51828 1080 aa19.66■□□□□ 0.74
PHGDH-208ENST00000641023 GMCL1Q96IK5 515 aa19.66■□□□□ 0.74
PHGDH-208ENST00000641023 TMEM39BQ9GZU3 492 aa19.66■□□□□ 0.74
PHGDH-208ENST00000641023 SERTAD1Q9UHV2 236 aa19.66■□□□□ 0.74
PHGDH-208ENST00000641023 USP17L10C9JJH3 530 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms