RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ARHGAP23Q9P227 1491 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 NWD1Q149M9 1564 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 PP2D1A8MPX8 630 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 MCAMP43121 646 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 CARSP49589 748 aaKnown RBP15.37■□□□□ 0.05
SCARB2-227ENST00000640957 HLFQ16534 295 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 TCP11X2Q5H9J9 407 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 HPS3Q969F9 1004 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 PIH1D3Q9NQM4 214 aaKnown RBP15.37■□□□□ 0.05
SCARB2-227ENST00000640957 UPP2O95045 317 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 IPO7O95373 1038 aaKnown RBP15.37■□□□□ 0.05
SCARB2-227ENST00000640957 IL2RBP14784 551 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 PRCPP42785 496 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 RTN1Q16799 776 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 SMIM5Q71RC9 77 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 DNAAF5Q86Y56 855 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 PRPF38AQ8NAV1 312 aaKnown RBP15.37■□□□□ 0.05
SCARB2-227ENST00000640957 DONSONQ9NYP3 566 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 ABCF2Q9UG63 623 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 MMP14P50281 582 aa15.36■□□□□ 0.05
SCARB2-227ENST00000640957 CCDC24Q8N4L8 307 aa15.36■□□□□ 0.05
SCARB2-227ENST00000640957 SHISA4Q96DD7 197 aa15.36■□□□□ 0.05
SCARB2-227ENST00000640957 CCDC114Q96M63 670 aa15.36■□□□□ 0.05
SCARB2-227ENST00000640957 CTAGE1Q96RT6 745 aa15.36■□□□□ 0.05
SCARB2-227ENST00000640957 ODF2LQ9ULJ1 636 aa15.36■□□□□ 0.05
SCARB2-227ENST00000640957 V9GY48 417 aaPredicted RBP15.36■□□□□ 0.05
SCARB2-227ENST00000640957 TRIM75PA6NK02 468 aa15.36■□□□□ 0.05
SCARB2-227ENST00000640957 HSF2BPO75031 334 aa15.36■□□□□ 0.05
SCARB2-227ENST00000640957 VEGFAP15692 232 aaPredicted RBP15.36■□□□□ 0.05
SCARB2-227ENST00000640957 TMOD1P28289 359 aa15.36■□□□□ 0.05
SCARB2-227ENST00000640957 NF2P35240 595 aa15.36■□□□□ 0.05
SCARB2-227ENST00000640957 RABL6Q3YEC7 729 aaPredicted RBP15.36■□□□□ 0.05
SCARB2-227ENST00000640957 NOC3LQ8WTT2 800 aaKnown RBP15.36■□□□□ 0.05
SCARB2-227ENST00000640957 FAM184BQ9ULE4 1060 aa15.36■□□□□ 0.05
SCARB2-227ENST00000640957 SRPRBQ9Y5M8 271 aaKnown RBP15.36■□□□□ 0.05
SCARB2-227ENST00000640957 MEGF6O75095 1541 aa15.36■□□□□ 0.05
SCARB2-227ENST00000640957 HGSO14964 777 aaPredicted RBP15.35■□□□□ 0.05
SCARB2-227ENST00000640957 PARP1P09874 1014 aaKnown RBP15.35■□□□□ 0.05
SCARB2-227ENST00000640957 PAK1Q13153 545 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 PTGDRQ13258 359 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 MTRQ99707 1265 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 NAPBQ9H115 298 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 PEX19P40855 299 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 GUCY2DQ02846 1103 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 NAA35Q5VZE5 725 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 NAIF1Q69YI7 327 aaPredicted RBP15.35■□□□□ 0.05
SCARB2-227ENST00000640957 NHEJ1Q9H9Q4 299 aaPredicted RBP15.35■□□□□ 0.05
SCARB2-227ENST00000640957 HAUS2Q9NVX0 235 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.35■□□□□ 0.05
SCARB2-227ENST00000640957 MYH15Q9Y2K3 1946 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 MEFVO15553 781 aaPredicted RBP15.35■□□□□ 0.05
SCARB2-227ENST00000640957 KRT86O43790 486 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 MYBL1P10243 752 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 ITGA6P23229 1130 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 NAA25Q14CX7 972 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 RILPL1Q5EBL4 403 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 NT5DC1Q5TFE4 455 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 TRIM47Q96LD4 638 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 VIPAS39Q9H9C1 493 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 FAM207AQ9NSI2 230 aaPredicted RBP15.35■□□□□ 0.05
SCARB2-227ENST00000640957 KLC4Q9NSK0 619 aa15.35■□□□□ 0.05
SCARB2-227ENST00000640957 XDHP47989 1333 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 KDM6AO15550 1401 aaPredicted RBP15.34■□□□□ 0.05
SCARB2-227ENST00000640957 SLIT1O75093 1534 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 CACNA1FO60840 1977 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 LSP1P33241 339 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 USP8P40818 1118 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 CEP85LQ5SZL2 805 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 HAUS4Q9H6D7 363 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 EPB41L5Q9HCM4 733 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 RBM12Q9NTZ6 932 aaKnown RBP15.34■□□□□ 0.05
SCARB2-227ENST00000640957 C1orf167Q5SNV9 1468 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 SHOX2O60902 331 aaPredicted RBP15.34■□□□□ 0.05
SCARB2-227ENST00000640957 CCDC40Q4G0X9 1142 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 SPATA4Q8NEY3 305 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 GREM2Q9H772 168 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 H7C1W4 665 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 MBD4O95243 580 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 ARID5AQ03989 594 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 CCDC70Q6NSX1 233 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 POTEDQ86YR6 584 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 CCDC13Q8IYE1 715 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 RASGRP4Q8TDF6 673 aa15.34■□□□□ 0.05
SCARB2-227ENST00000640957 FMN2Q9NZ56 1722 aa15.33■□□□□ 0.05
SCARB2-227ENST00000640957 ZNF335Q9H4Z2 1342 aaPredicted RBP15.33■□□□□ 0.05
SCARB2-227ENST00000640957 FER1L4A9Z1Z3 1794 aa15.33■□□□□ 0.05
SCARB2-227ENST00000640957 CYP2D7A0A087X1C5 515 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 FAM237AA0A1B0GTK4 181 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 PSMD14O00487 310 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 GLI1P08151 1106 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 FNTAP49354 379 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 CASP7P55210 303 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 PIK3AP1Q6ZUJ8 805 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 BRINP3Q76B58 766 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 KLHL7Q8IXQ5 586 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 CNPY4Q8N129 248 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.33■□□□□ 0.04
SCARB2-227ENST00000640957 JAG2Q9Y219 1238 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 RGPD2P0DJD1 1756 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 GOLGA6L7A0A1B0GV03 622 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms