RNA–Protein interactions for RNA: ENST00000640853.1

LPP-222, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-222ENST00000640853 VCX3BQ9H321 246 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 IFT122Q9HBG6 1241 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 GPHNQ9NQX3 736 aaPredicted RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 PPFIA4O75335 1185 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 MBD4O95243 580 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 ADD1P35611 737 aaKnown RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 NECTIN1Q15223 517 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 ZNF589Q86UQ0 364 aaPredicted RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 DIS3L2Q8IYB7 885 aaKnown RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 PPFIBP2Q8ND30 876 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 DBNDD2Q9BQY9 259 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 MAPK8IP1Q9UQF2 711 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 YTHDC2Q9H6S0 1430 aaKnown RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 IQCB1Q15051 598 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 C6orf118Q5T5N4 469 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 KCNV2Q8TDN2 545 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 KCNB2Q92953 911 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 GBP5Q96PP8 586 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 SERTAD1Q9UHV2 236 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 LAD1O00515 517 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 CAPN15O75808 1086 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 HSPD1P10809 573 aaKnown RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 POLD1P28340 1107 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 FOXD4Q12950 439 aaPredicted RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 WHAMMQ8TF30 809 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 LSM14BQ9BX40 385 aaKnown RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 N4BP1O75113 896 aaKnown RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 PSMD2Q13200 908 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 DCAF17Q5H9S7 520 aaPredicted RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 C2CD5Q86YS7 1000 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 ZNF496Q96IT1 587 aaPredicted RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 ZC3H12CQ9C0D7 883 aaKnown RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 THAP9Q9H5L6 903 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 SYCP2Q9BX26 1530 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 STK10O94804 968 aaKnown RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 RPN1P04843 607 aaKnown RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 BCAMP50895 628 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 NBPF20Q3BBV1 942 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 SH2D4BQ5SQS7 431 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 HHATQ5VTY9 493 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 NYAP1Q6ZVC0 841 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 CABS1Q96KC9 395 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 AK8Q96MA6 479 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 SUDS3Q9H7L9 328 aaPredicted RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.36□□□□□ -1.875e-7■■■□□ 15.9
LPP-222ENST00000640853 PTPRZ1P23471 2315 aaPredicted RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 GOLGA8CPA6NN73 597 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 SEMA3EO15041 775 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 MAN1A1P33908 653 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 SLC1A4P43007 532 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 ADCY7P51828 1080 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 PNMA8AQ86V59 439 aaPredicted RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 CCDC105Q8IYK2 499 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 FBXO41Q8TF61 875 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 PHKBQ93100 1093 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 GDAP1L1Q96MZ0 367 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 IWS1Q96ST2 819 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 ZSCAN10Q96SZ4 725 aaPredicted RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 ABCB6Q9NP58 842 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 AMFRQ9UKV5 643 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 MKL2Q9ULH7 1088 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 NEDD9Q14511 834 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 GKAP1Q5VSY0 366 aaPredicted RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 PNMA1Q8ND90 353 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 PPP4R1Q8TF05 950 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 FTOQ9C0B1 505 aaKnown RBP eCLIP3.36□□□□□ -1.87
LPP-222ENST00000640853 GABBR1Q9UBS5 961 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 KCNJ14Q9UNX9 436 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 TMEM2Q9UHN6 1383 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 HPDP32754 393 aaPredicted RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 ZNF131P52739 623 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 MXRA7P84157 204 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 LMNB2Q03252 620 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 NT5C3AQ9H0P0 336 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 SMCO2A6NFE2 343 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 HIP1RO75146 1068 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 RXRAP19793 462 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 ITIH3Q06033 890 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 NONOQ15233 471 aaKnown RBP eCLIP3.36□□□□□ -1.87
LPP-222ENST00000640853 CCDC144BQ3MJ40 725 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 ZNF365Q70YC5 407 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 CCDC13Q8IYE1 715 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 MIPOL1Q8TD10 442 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 CAPN7Q9Y6W3 813 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 USP27XA6NNY8 438 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 NOL3O60936 208 aaKnown RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 ZMYM1Q5SVZ6 1142 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 PAGE5Q96GU1 130 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 METTL14Q9HCE5 456 aaKnown RBP3.36□□□□□ -1.87
LPP-222ENST00000640853 PANK4Q9NVE7 773 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 RWDD2AQ9UIY3 292 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 PHLPP2Q6ZVD8 1323 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 SH3TC1Q8TE82 1336 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 STAT1P42224 750 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 STRN3Q13033 797 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 LRCH2Q5VUJ6 765 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 VSTM4Q8IW00 320 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 ARMT1Q9H993 441 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 HOMER3Q9NSC5 361 aa3.36□□□□□ -1.87
LPP-222ENST00000640853 RRP15Q9Y3B9 282 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms