RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 SV2BQ7L1I2 683 aa6.21□□□□□ -1.41
SCN3A-210ENST00000640652 DNAJC10Q8IXB1 793 aa6.21□□□□□ -1.41
SCN3A-210ENST00000640652 BLIDQ8IZY5 108 aa6.21□□□□□ -1.41
SCN3A-210ENST00000640652 NOC4LQ9BVI4 516 aaKnown RBP6.21□□□□□ -1.41
SCN3A-210ENST00000640652 ZSWIM5Q9P217 1185 aa6.21□□□□□ -1.41
SCN3A-210ENST00000640652 GNA14O95837 355 aa6.21□□□□□ -1.41
SCN3A-210ENST00000640652 PRPHP41219 470 aa6.21□□□□□ -1.41
SCN3A-210ENST00000640652 CAPZA3Q96KX2 299 aa6.21□□□□□ -1.41
SCN3A-210ENST00000640652 BRIP1Q9BX63 1249 aa6.21□□□□□ -1.41
SCN3A-210ENST00000640652 SOWAHDA6NJG2 315 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 hCG_1984214I3L0E3 225 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 ORC2Q13416 577 aaPredicted RBP6.21□□□□□ -1.42
SCN3A-210ENST00000640652 VWA3BQ502W6 1294 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 SHC4Q6S5L8 630 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 SPATS2Q86XZ4 545 aaKnown RBP6.21□□□□□ -1.42
SCN3A-210ENST00000640652 ZNF713Q8N859 430 aaPredicted RBP6.21□□□□□ -1.42
SCN3A-210ENST00000640652 ABHD10Q9NUJ1 306 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 BTG4Q9NY30 223 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 SHROOM3Q8TF72 1996 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 MACROD2A1Z1Q3 448 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 ANKS4BQ8N8V4 417 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 TULP1O00294 542 aaPredicted RBP6.21□□□□□ -1.42
SCN3A-210ENST00000640652 TBC1D8BQ0IIM8 1120 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 ZNF827Q17R98 1081 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 LONRF2Q1L5Z9 754 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 ILDR1Q86SU0 546 aaPredicted RBP6.21□□□□□ -1.42
SCN3A-210ENST00000640652 NAP1L4Q99733 375 aaKnown RBP6.21□□□□□ -1.42
SCN3A-210ENST00000640652 EPN1Q9Y6I3 576 aaPredicted RBP6.21□□□□□ -1.42
SCN3A-210ENST00000640652 KDM3AQ9Y4C1 1321 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 AP5Z1O43299 807 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 SSBP05455 408 aaKnown RBP eCLIP6.21□□□□□ -1.42
SCN3A-210ENST00000640652 COPB1P53618 953 aaKnown RBP6.21□□□□□ -1.42
SCN3A-210ENST00000640652 NR5A1Q13285 461 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 SF3B2Q13435 895 aaKnown RBP6.21□□□□□ -1.42
SCN3A-210ENST00000640652 CFAP221Q4G0U5 840 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 PDE11AQ9HCR9 933 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 TARSL2A2RTX5 802 aaKnown RBP6.21□□□□□ -1.42
SCN3A-210ENST00000640652 RBL2Q08999 1139 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 CALCRLQ16602 461 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 DNAJC21Q5F1R6 531 aaKnown RBP6.21□□□□□ -1.42
SCN3A-210ENST00000640652 PI16Q6UXB8 463 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 STXBP4Q6ZWJ1 553 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 TAOK3Q9H2K8 898 aa6.21□□□□□ -1.42
SCN3A-210ENST00000640652 TNNC1P63316 161 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 MAP3K9P80192 1104 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 CETN1Q12798 172 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 TCP11X2Q5H9J9 407 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 C8orf74Q6P047 294 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 POTEDQ86YR6 584 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 IGDCC4Q8TDY8 1250 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 LMBR1Q8WVP7 490 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 VPS16Q9H269 839 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 THAP9Q9H5L6 903 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 TAF6LQ9Y6J9 622 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 HLA-DOAP06340 250 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 FDPSP14324 419 aaKnown RBP6.2□□□□□ -1.42
SCN3A-210ENST00000640652 CC2D1AQ6P1N0 951 aaPredicted RBP6.2□□□□□ -1.42
SCN3A-210ENST00000640652 PDE4DIPQ5VU43 2346 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 H2AFXP16104 143 aaPredicted RBP6.2□□□□□ -1.42
SCN3A-210ENST00000640652 KRT31Q15323 416 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 DDX17Q92841 729 aaKnown RBP6.2□□□□□ -1.42
SCN3A-210ENST00000640652 PODXL2Q9NZ53 605 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 SWAP70Q9UH65 585 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 RASAL2Q9UJF2 1139 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 HPSEQ9Y251 543 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 RBBP6Q7Z6E9 1792 aaKnown RBP6.2□□□□□ -1.42
SCN3A-210ENST00000640652 MIA3Q5JRA6 1907 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 IGSF3O75054 1194 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 BCAMP50895 628 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 IKQ13123 557 aaPredicted RBP6.2□□□□□ -1.42
SCN3A-210ENST00000640652 UBE4AQ14139 1066 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 CYB5R4Q7L1T6 521 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 RASGRP2Q7LDG7 609 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 PAGE5Q96GU1 130 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 NAP1L3Q99457 506 aaPredicted RBP6.2□□□□□ -1.42
SCN3A-210ENST00000640652 PCDHB6Q9Y5E3 794 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 TTC31Q49AM3 519 aaPredicted RBP6.2□□□□□ -1.42
SCN3A-210ENST00000640652 LCORLQ8N3X6 602 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 CCDC155Q8N6L0 562 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 MAP3K14Q99558 947 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 DISC1Q9NRI5 854 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 ATP8A2Q9NTI2 1148 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 RSPH14Q9UHP6 348 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 PARP3Q9Y6F1 533 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 NR1I3Q14994 352 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 TPTE2Q6XPS3 522 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 BICDL1Q6ZP65 573 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 SLF1Q9BQI6 1058 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 STMN4Q9H169 189 aaPredicted RBP6.2□□□□□ -1.42
SCN3A-210ENST00000640652 TAB2Q9NYJ8 693 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 PCDHA4Q9UN74 947 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 ATP2C1P98194 919 aaPredicted RBP6.2□□□□□ -1.42
SCN3A-210ENST00000640652 SLC9C1Q4G0N8 1177 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 WDR24Q96S15 920 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 NT5C3AQ9H0P0 336 aa6.2□□□□□ -1.42
SCN3A-210ENST00000640652 ANTXR2P58335 489 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 ATP2B2Q01814 1243 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 CHRNDQ07001 517 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 KRT79Q5XKE5 535 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 SDR42E1Q8WUS8 393 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms